EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000004161 (Gene tree)
Gene ID: 109996882
Gene Symbol: tdrd1
Alias: im:7155161
Full Name: tudor domain containing 1
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 13326 bases
Position: chrFKLU01000389.1:84205-97530
Accession: 109996882
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000005413	TUDOR	PF00567.24	6.3e-115	1	4
ENSLBEP00000005413	TUDOR	PF00567.24	6.3e-115	2	4
ENSLBEP00000005413	TUDOR	PF00567.24	6.3e-115	3	4
ENSLBEP00000005413	TUDOR	PF00567.24	6.3e-115	4	4
ENSLBEP00000005445	TUDOR	PF00567.24	1.5e-111	1	4
ENSLBEP00000005445	TUDOR	PF00567.24	1.5e-111	2	4
ENSLBEP00000005445	TUDOR	PF00567.24	1.5e-111	3	4
ENSLBEP00000005445	TUDOR	PF00567.24	1.5e-111	4	4
ENSLBEP00000005500	TUDOR	PF00567.24	1.1e-91	1	4
ENSLBEP00000005500	TUDOR	PF00567.24	1.1e-91	2	4
ENSLBEP00000005500	TUDOR	PF00567.24	1.1e-91	3	4
ENSLBEP00000005500	TUDOR	PF00567.24	1.1e-91	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000005780	-	4005	-	ENSLBEP00000005500	1154 (aa)	-	-
ENSLBET00000005724	-	4059	XM_020651212	ENSLBEP00000005445	1172 (aa)	XP_020506868	-
ENSLBET00000005690	-	4176	XM_020651211	ENSLBEP00000005413	1211 (aa)	XP_020506867	-

Gene Model

Click here to download ENSLBEG00000004161's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000004161's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000004161	tdrd1	69	31.304	ENSLBEG00000004565	-	68	31.304
ENSLBEG00000004161	tdrd1	78	34.043	ENSLBEG00000022955	tdrd6	66	34.043

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000004161	tdrd1	86	35.135	ENSG00000095627	TDRD1	87	35.135	Homo_sapiens
ENSLBEG00000004161	tdrd1	98	63.000	ENSAPOG00000023199	tdrd1	96	66.487	Acanthochromis_polyacanthus
ENSLBEG00000004161	tdrd1	85	33.836	ENSAMEG00000015182	TDRD1	91	33.836	Ailuropoda_melanoleuca
ENSLBEG00000004161	tdrd1	100	64.174	ENSACIG00000010576	tdrd1	96	67.762	Amphilophus_citrinellus
ENSLBEG00000004161	tdrd1	98	72.444	ENSAOCG00000007059	tdrd1	100	72.444	Amphiprion_ocellaris
ENSLBEG00000004161	tdrd1	99	64.381	ENSAPEG00000017049	tdrd1	99	64.381	Amphiprion_percula
ENSLBEG00000004161	tdrd1	94	69.352	ENSATEG00000021627	tdrd1	98	69.352	Anabas_testudineus
ENSLBEG00000004161	tdrd1	81	32.373	ENSAPLG00000012609	TDRD1	92	32.857	Anas_platyrhynchos
ENSLBEG00000004161	tdrd1	79	32.053	ENSACAG00000009854	TDRD1	80	32.117	Anolis_carolinensis
ENSLBEG00000004161	tdrd1	86	35.664	ENSANAG00000035710	TDRD1	86	35.664	Aotus_nancymaae
ENSLBEG00000004161	tdrd1	98	66.388	ENSACLG00000014107	tdrd1	99	66.304	Astatotilapia_calliptera
ENSLBEG00000004161	tdrd1	97	45.137	ENSAMXG00000015146	tdrd1	99	45.059	Astyanax_mexicanus
ENSLBEG00000004161	tdrd1	87	34.650	ENSBTAG00000006855	TDRD1	85	34.686	Bos_taurus
ENSLBEG00000004161	tdrd1	85	34.414	ENSCJAG00000019270	TDRD1	86	35.176	Callithrix_jacchus
ENSLBEG00000004161	tdrd1	85	34.053	ENSCAFG00000011266	TDRD1	87	34.053	Canis_familiaris
ENSLBEG00000004161	tdrd1	90	34.657	ENSCAFG00020012373	TDRD1	86	34.657	Canis_lupus_dingo
ENSLBEG00000004161	tdrd1	85	34.791	ENSCHIG00000012766	TDRD1	86	34.791	Capra_hircus
ENSLBEG00000004161	tdrd1	85	34.808	ENSTSYG00000004935	TDRD1	87	34.808	Carlito_syrichta
ENSLBEG00000004161	tdrd1	84	35.624	ENSCPOG00000004190	TDRD1	82	35.624	Cavia_porcellus
ENSLBEG00000004161	tdrd1	88	35.429	ENSCCAG00000027375	TDRD1	87	35.429	Cebus_capucinus
ENSLBEG00000004161	tdrd1	86	35.400	ENSCATG00000035999	TDRD1	88	34.604	Cercocebus_atys
ENSLBEG00000004161	tdrd1	85	33.679	ENSCLAG00000003935	TDRD1	90	33.868	Chinchilla_lanigera
ENSLBEG00000004161	tdrd1	85	34.795	ENSCSAG00000005071	TDRD1	86	34.795	Chlorocebus_sabaeus
ENSLBEG00000004161	tdrd1	82	46.923	ENSCHOG00000001690	TDRD1	70	46.923	Choloepus_hoffmanni
ENSLBEG00000004161	tdrd1	82	36.929	ENSCPBG00000003780	TDRD1	85	37.124	Chrysemys_picta_bellii
ENSLBEG00000004161	tdrd1	86	35.200	ENSCANG00000035172	TDRD1	86	35.200	Colobus_angolensis_palliatus
ENSLBEG00000004161	tdrd1	85	34.146	ENSCGRG00001004632	Tdrd1	90	34.146	Cricetulus_griseus_chok1gshd
ENSLBEG00000004161	tdrd1	85	34.479	ENSCGRG00000004981	Tdrd1	87	34.479	Cricetulus_griseus_crigri
ENSLBEG00000004161	tdrd1	91	54.488	ENSCSEG00000006983	tdrd1	97	54.922	Cynoglossus_semilaevis
ENSLBEG00000004161	tdrd1	86	56.526	ENSCVAG00000020980	tdrd1	99	56.226	Cyprinodon_variegatus
ENSLBEG00000004161	tdrd1	97	45.132	ENSDARG00000007465	tdrd1	99	44.896	Danio_rerio
ENSLBEG00000004161	tdrd1	86	34.734	ENSDNOG00000012114	TDRD1	86	34.827	Dasypus_novemcinctus
ENSLBEG00000004161	tdrd1	85	34.135	ENSDORG00000009986	Tdrd1	89	34.135	Dipodomys_ordii
ENSLBEG00000004161	tdrd1	83	44.828	ENSETEG00000020143	TDRD1	76	44.828	Echinops_telfairi
ENSLBEG00000004161	tdrd1	90	34.331	ENSEASG00005014802	TDRD1	91	33.647	Equus_asinus_asinus
ENSLBEG00000004161	tdrd1	86	39.691	ENSECAG00000009748	TDRD1	88	39.691	Equus_caballus
ENSLBEG00000004161	tdrd1	85	34.375	ENSEEUG00000010076	TDRD1	85	34.375	Erinaceus_europaeus
ENSLBEG00000004161	tdrd1	98	49.144	ENSELUG00000024364	tdrd1	95	50.476	Esox_lucius
ENSLBEG00000004161	tdrd1	86	33.803	ENSFCAG00000000632	TDRD1	91	33.897	Felis_catus
ENSLBEG00000004161	tdrd1	71	41.935	ENSFALG00000002237	TDRD1	86	41.935	Ficedula_albicollis
ENSLBEG00000004161	tdrd1	85	33.840	ENSFDAG00000013225	TDRD1	86	33.840	Fukomys_damarensis
ENSLBEG00000004161	tdrd1	84	62.821	ENSFHEG00000009203	tdrd1	92	62.821	Fundulus_heteroclitus
ENSLBEG00000004161	tdrd1	72	56.481	ENSGMOG00000016797	-	69	56.481	Gadus_morhua
ENSLBEG00000004161	tdrd1	82	31.800	ENSGALG00000046180	TDRD1	89	31.800	Gallus_gallus
ENSLBEG00000004161	tdrd1	98	57.359	ENSGAFG00000002668	tdrd1	99	57.443	Gambusia_affinis
ENSLBEG00000004161	tdrd1	74	68.333	ENSGACG00000006590	tdrd1	100	68.333	Gasterosteus_aculeatus
ENSLBEG00000004161	tdrd1	86	35.235	ENSGGOG00000004250	TDRD1	86	35.235	Gorilla_gorilla
ENSLBEG00000004161	tdrd1	99	66.528	ENSHBUG00000005216	tdrd1	99	66.667	Haplochromis_burtoni
ENSLBEG00000004161	tdrd1	86	31.250	ENSHGLG00000010877	TDRD1	86	31.250	Heterocephalus_glaber_female
ENSLBEG00000004161	tdrd1	83	34.156	ENSHGLG00100013857	TDRD1	91	34.156	Heterocephalus_glaber_male
ENSLBEG00000004161	tdrd1	93	46.388	ENSHCOG00000002840	tdrd1	95	46.388	Hippocampus_comes
ENSLBEG00000004161	tdrd1	98	45.634	ENSIPUG00000017232	tdrd1	98	47.532	Ictalurus_punctatus
ENSLBEG00000004161	tdrd1	87	34.735	ENSSTOG00000003221	TDRD1	91	33.874	Ictidomys_tridecemlineatus
ENSLBEG00000004161	tdrd1	87	34.425	ENSJJAG00000014720	Tdrd1	87	34.420	Jaculus_jaculus
ENSLBEG00000004161	tdrd1	86	63.302	ENSKMAG00000018558	tdrd1	98	63.208	Kryptolebias_marmoratus
ENSLBEG00000004161	tdrd1	83	34.846	ENSLACG00000011559	TDRD1	87	34.653	Latimeria_chalumnae
ENSLBEG00000004161	tdrd1	86	41.706	ENSLOCG00000012030	tdrd1	100	43.122	Lepisosteus_oculatus
ENSLBEG00000004161	tdrd1	72	36.089	ENSLAFG00000011575	TDRD1	92	36.089	Loxodonta_africana
ENSLBEG00000004161	tdrd1	86	35.600	ENSMFAG00000043487	TDRD1	86	35.600	Macaca_fascicularis
ENSLBEG00000004161	tdrd1	86	35.600	ENSMMUG00000022517	TDRD1	86	35.600	Macaca_mulatta
ENSLBEG00000004161	tdrd1	86	35.743	ENSMNEG00000031108	TDRD1	86	35.743	Macaca_nemestrina
ENSLBEG00000004161	tdrd1	86	35.500	ENSMLEG00000032281	TDRD1	86	35.500	Mandrillus_leucophaeus
ENSLBEG00000004161	tdrd1	98	65.130	ENSMAMG00000015287	tdrd1	97	67.491	Mastacembelus_armatus
ENSLBEG00000004161	tdrd1	98	66.695	ENSMZEG00005025315	tdrd1	99	66.499	Maylandia_zebra
ENSLBEG00000004161	tdrd1	89	32.190	ENSMGAG00000011067	TDRD1	99	32.242	Meleagris_gallopavo
ENSLBEG00000004161	tdrd1	74	35.698	ENSMAUG00000012164	Tdrd1	87	33.626	Mesocricetus_auratus
ENSLBEG00000004161	tdrd1	90	35.154	ENSMICG00000016190	TDRD1	91	34.270	Microcebus_murinus
ENSLBEG00000004161	tdrd1	85	33.586	ENSMOCG00000022360	Tdrd1	92	33.681	Microtus_ochrogaster
ENSLBEG00000004161	tdrd1	98	64.829	ENSMMOG00000014068	tdrd1	96	66.814	Mola_mola
ENSLBEG00000004161	tdrd1	87	33.920	ENSMODG00000009788	TDRD1	88	33.920	Monodelphis_domestica
ENSLBEG00000004161	tdrd1	98	65.126	ENSMALG00000022115	tdrd1	100	65.655	Monopterus_albus
ENSLBEG00000004161	tdrd1	85	33.777	MGP_CAROLIEiJ_G0023095	Tdrd1	86	33.873	Mus_caroli
ENSLBEG00000004161	tdrd1	85	34.100	ENSMUSG00000025081	Tdrd1	91	34.006	Mus_musculus
ENSLBEG00000004161	tdrd1	85	39.344	MGP_PahariEiJ_G0014583	Tdrd1	93	33.088	Mus_pahari
ENSLBEG00000004161	tdrd1	85	34.291	MGP_SPRETEiJ_G0024016	Tdrd1	85	34.198	Mus_spretus
ENSLBEG00000004161	tdrd1	88	33.071	ENSMPUG00000001987	TDRD1	90	32.824	Mustela_putorius_furo
ENSLBEG00000004161	tdrd1	86	34.402	ENSNGAG00000015231	Tdrd1	92	34.402	Nannospalax_galili
ENSLBEG00000004161	tdrd1	99	63.750	ENSNBRG00000017920	tdrd1	97	65.845	Neolamprologus_brichardi
ENSLBEG00000004161	tdrd1	85	34.421	ENSNLEG00000016228	TDRD1	85	34.421	Nomascus_leucogenys
ENSLBEG00000004161	tdrd1	85	32.655	ENSMEUG00000007717	TDRD1	87	33.035	Notamacropus_eugenii
ENSLBEG00000004161	tdrd1	85	34.286	ENSOPRG00000009180	TDRD1	86	34.286	Ochotona_princeps
ENSLBEG00000004161	tdrd1	85	33.366	ENSODEG00000011965	TDRD1	86	33.268	Octodon_degus
ENSLBEG00000004161	tdrd1	98	66.974	ENSONIG00000016382	tdrd1	100	66.890	Oreochromis_niloticus
ENSLBEG00000004161	tdrd1	80	34.813	ENSOANG00000001562	TDRD1	84	34.186	Ornithorhynchus_anatinus
ENSLBEG00000004161	tdrd1	84	34.710	ENSOCUG00000025327	TDRD1	87	34.710	Oryctolagus_cuniculus
ENSLBEG00000004161	tdrd1	96	56.351	ENSORLG00000004833	tdrd1	99	56.319	Oryzias_latipes
ENSLBEG00000004161	tdrd1	97	56.255	ENSORLG00020019231	tdrd1	99	55.932	Oryzias_latipes_hni
ENSLBEG00000004161	tdrd1	97	56.229	ENSORLG00015017184	tdrd1	98	56.160	Oryzias_latipes_hsok
ENSLBEG00000004161	tdrd1	98	57.047	ENSOMEG00000023637	tdrd1	98	56.963	Oryzias_melastigma
ENSLBEG00000004161	tdrd1	87	34.245	ENSOGAG00000001370	TDRD1	91	34.109	Otolemur_garnettii
ENSLBEG00000004161	tdrd1	85	34.696	ENSOARG00000014200	-	90	34.708	Ovis_aries
ENSLBEG00000004161	tdrd1	86	34.935	ENSPPAG00000041621	TDRD1	86	34.935	Pan_paniscus
ENSLBEG00000004161	tdrd1	85	33.807	ENSPPRG00000000191	TDRD1	91	33.897	Panthera_pardus
ENSLBEG00000004161	tdrd1	86	33.710	ENSPTIG00000010264	TDRD1	91	33.804	Panthera_tigris_altaica
ENSLBEG00000004161	tdrd1	86	34.935	ENSPTRG00000002958	TDRD1	86	34.935	Pan_troglodytes
ENSLBEG00000004161	tdrd1	86	35.400	ENSPANG00000020752	TDRD1	88	34.604	Papio_anubis
ENSLBEG00000004161	tdrd1	91	41.892	ENSPKIG00000010586	tdrd1	90	41.810	Paramormyrops_kingsleyae
ENSLBEG00000004161	tdrd1	84	34.828	ENSPSIG00000014655	TDRD1	84	34.828	Pelodiscus_sinensis
ENSLBEG00000004161	tdrd1	74	80.556	ENSPMGG00000018890	tdrd1	91	80.556	Periophthalmus_magnuspinnatus
ENSLBEG00000004161	tdrd1	89	30.513	ENSPEMG00000004582	Tdrd1	92	34.411	Peromyscus_maniculatus_bairdii
ENSLBEG00000004161	tdrd1	68	34.194	ENSPMAG00000004416	-	99	34.194	Petromyzon_marinus
ENSLBEG00000004161	tdrd1	88	35.355	ENSPCIG00000009739	TDRD1	84	35.355	Phascolarctos_cinereus
ENSLBEG00000004161	tdrd1	90	58.129	ENSPFOG00000002145	tdrd1	99	58.129	Poecilia_formosa
ENSLBEG00000004161	tdrd1	98	58.221	ENSPLAG00000010241	tdrd1	99	58.221	Poecilia_latipinna
ENSLBEG00000004161	tdrd1	98	56.963	ENSPMEG00000021893	tdrd1	99	56.963	Poecilia_mexicana
ENSLBEG00000004161	tdrd1	98	58.641	ENSPREG00000022663	tdrd1	99	58.473	Poecilia_reticulata
ENSLBEG00000004161	tdrd1	85	33.561	ENSPPYG00000002671	TDRD1	85	33.398	Pongo_abelii
ENSLBEG00000004161	tdrd1	80	34.043	ENSPCAG00000006692	TDRD1	71	33.815	Procavia_capensis
ENSLBEG00000004161	tdrd1	90	34.865	ENSPCOG00000026619	TDRD1	88	34.117	Propithecus_coquereli
ENSLBEG00000004161	tdrd1	86	34.398	ENSPVAG00000003055	TDRD1	86	34.398	Pteropus_vampyrus
ENSLBEG00000004161	tdrd1	99	63.523	ENSPNYG00000001706	tdrd1	96	65.053	Pundamilia_nyererei
ENSLBEG00000004161	tdrd1	97	46.444	ENSPNAG00000005831	tdrd1	99	45.985	Pygocentrus_nattereri
ENSLBEG00000004161	tdrd1	85	33.807	ENSRNOG00000017064	Tdrd1	86	33.713	Rattus_norvegicus
ENSLBEG00000004161	tdrd1	86	35.135	ENSRBIG00000029668	TDRD1	88	35.135	Rhinopithecus_bieti
ENSLBEG00000004161	tdrd1	86	35.100	ENSRROG00000043379	TDRD1	86	35.100	Rhinopithecus_roxellana
ENSLBEG00000004161	tdrd1	85	34.564	ENSSBOG00000023561	TDRD1	86	35.329	Saimiri_boliviensis_boliviensis
ENSLBEG00000004161	tdrd1	85	35.196	ENSSHAG00000014311	TDRD1	83	35.132	Sarcophilus_harrisii
ENSLBEG00000004161	tdrd1	87	42.297	ENSSFOG00015022020	tdrd1	99	42.056	Scleropages_formosus
ENSLBEG00000004161	tdrd1	94	68.074	ENSSMAG00000019271	tdrd1	97	67.867	Scophthalmus_maximus
ENSLBEG00000004161	tdrd1	92	71.904	ENSSDUG00000022012	tdrd1	97	73.699	Seriola_dumerili
ENSLBEG00000004161	tdrd1	89	73.845	ENSSLDG00000006423	tdrd1	99	71.529	Seriola_lalandi_dorsalis
ENSLBEG00000004161	tdrd1	85	37.594	ENSSARG00000008828	TDRD1	69	37.594	Sorex_araneus
ENSLBEG00000004161	tdrd1	84	32.683	ENSSPUG00000005015	TDRD1	86	33.098	Sphenodon_punctatus
ENSLBEG00000004161	tdrd1	98	62.052	ENSSPAG00000018805	tdrd1	99	63.810	Stegastes_partitus
ENSLBEG00000004161	tdrd1	86	33.916	ENSSSCG00000021075	TDRD1	92	33.916	Sus_scrofa
ENSLBEG00000004161	tdrd1	69	36.802	ENSTGUG00000010905	TDRD1	91	36.508	Taeniopygia_guttata
ENSLBEG00000004161	tdrd1	92	59.299	ENSTRUG00000012142	tdrd1	100	59.665	Takifugu_rubripes
ENSLBEG00000004161	tdrd1	74	60.034	ENSTNIG00000018898	tdrd1	100	59.865	Tetraodon_nigroviridis
ENSLBEG00000004161	tdrd1	85	38.259	ENSTBEG00000014417	-	85	36.800	Tupaia_belangeri
ENSLBEG00000004161	tdrd1	85	37.037	ENSTTRG00000010147	TDRD1	85	37.037	Tursiops_truncatus
ENSLBEG00000004161	tdrd1	88	34.197	ENSUAMG00000009025	TDRD1	90	33.491	Ursus_americanus
ENSLBEG00000004161	tdrd1	88	34.619	ENSUMAG00000000705	TDRD1	91	33.898	Ursus_maritimus
ENSLBEG00000004161	tdrd1	79	34.893	ENSVPAG00000004000	TDRD1	84	34.831	Vicugna_pacos
ENSLBEG00000004161	tdrd1	85	34.240	ENSVVUG00000009750	TDRD1	87	34.240	Vulpes_vulpes
ENSLBEG00000004161	tdrd1	85	56.059	ENSXCOG00000006412	tdrd1	98	59.475	Xiphophorus_couchianus
ENSLBEG00000004161	tdrd1	98	56.667	ENSXMAG00000008104	tdrd1	98	59.272	Xiphophorus_maculatus