EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000004172 (Gene tree)
Gene ID: 109975538
Gene Symbol: -
Alias: -
Full Name: ras-related protein Rab-11B-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 9579 bases
Position: chrFKLU01003230.1:711-10289
Accession: 109975538
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000005428	MMR_HSR1	PF01926.23	3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000005706	-	654	XM_020625896	ENSLBEP00000005428	217 (aa)	XP_020481552	UPI0009B380BA

Gene Model

Click here to download ENSLBEG00000004172's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000004172's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000004172	-	100	95.853	ENSLBEG00000006087	rab11ba	100	95.853
ENSLBEG00000004172	-	94	42.857	ENSLBEG00000002516	rab5aa	85	42.857
ENSLBEG00000004172	-	75	46.341	ENSLBEG00000019428	rab18b	80	46.341
ENSLBEG00000004172	-	77	35.714	ENSLBEG00000003644	rabl2	72	35.714
ENSLBEG00000004172	-	75	38.323	ENSLBEG00000020582	rab9a	82	38.323
ENSLBEG00000004172	-	95	31.604	ENSLBEG00000005018	rab32b	95	31.604
ENSLBEG00000004172	-	53	39.316	ENSLBEG00000027819	rab34b	58	39.316
ENSLBEG00000004172	-	80	44.828	ENSLBEG00000007681	si:dkey-16l2.16	98	40.865
ENSLBEG00000004172	-	76	53.012	ENSLBEG00000021040	rab1ba	83	53.012
ENSLBEG00000004172	-	79	45.402	ENSLBEG00000022630	-	82	45.402
ENSLBEG00000004172	-	66	42.667	ENSLBEG00000018063	-	62	42.667
ENSLBEG00000004172	-	79	54.386	ENSLBEG00000020796	rab2a	99	47.393
ENSLBEG00000004172	-	74	32.515	ENSLBEG00000025705	si:ch73-116o1.2	82	34.091
ENSLBEG00000004172	-	81	40.556	ENSLBEG00000013756	rab12	84	37.915
ENSLBEG00000004172	-	96	45.498	ENSLBEG00000027781	rab1ab	99	45.498
ENSLBEG00000004172	-	69	35.333	ENSLBEG00000001905	hrasb	85	36.420
ENSLBEG00000004172	-	71	32.704	ENSLBEG00000018180	si:dkey-13a21.4	78	32.704
ENSLBEG00000004172	-	77	53.801	ENSLBEG00000003101	rab4a	80	53.801
ENSLBEG00000004172	-	90	32.000	ENSLBEG00000026930	rab6ba	92	32.000
ENSLBEG00000004172	-	98	62.150	ENSLBEG00000002367	rab25a	97	62.150
ENSLBEG00000004172	-	74	46.296	ENSLBEG00000005861	rab18a	76	46.296
ENSLBEG00000004172	-	83	41.530	ENSLBEG00000001193	rab42a	84	41.530
ENSLBEG00000004172	-	72	36.943	ENSLBEG00000003748	rab6a	75	36.943
ENSLBEG00000004172	-	78	32.000	ENSLBEG00000018812	RAB29	91	32.000
ENSLBEG00000004172	-	79	40.113	ENSLBEG00000011478	rab9b	80	40.113
ENSLBEG00000004172	-	77	52.695	ENSLBEG00000019435	rab14	78	52.695
ENSLBEG00000004172	-	54	32.258	ENSLBEG00000011152	arl4d	59	32.258
ENSLBEG00000004172	-	74	47.205	ENSLBEG00000010408	-	74	46.626
ENSLBEG00000004172	-	79	33.140	ENSLBEG00000013176	rab23	79	34.356
ENSLBEG00000004172	-	75	31.792	ENSLBEG00000016218	rasl11a	66	31.792
ENSLBEG00000004172	-	73	31.875	ENSLBEG00000014885	rheb	86	31.875
ENSLBEG00000004172	-	95	43.062	ENSLBEG00000027226	-	73	48.538
ENSLBEG00000004172	-	86	42.473	ENSLBEG00000001146	rab30	90	42.473
ENSLBEG00000004172	-	83	37.838	ENSLBEG00000005128	-	81	37.838
ENSLBEG00000004172	-	82	38.947	ENSLBEG00000027691	RAB17	79	38.947
ENSLBEG00000004172	-	100	96.789	ENSLBEG00000015248	rab11bb	100	96.789
ENSLBEG00000004172	-	94	33.654	ENSLBEG00000002926	si:dkey-34d22.5	91	33.654
ENSLBEG00000004172	-	79	41.040	ENSLBEG00000025798	zgc:101559	74	41.040
ENSLBEG00000004172	-	75	32.934	ENSLBEG00000027628	si:cabz01085950.1	82	32.934
ENSLBEG00000004172	-	77	35.928	ENSLBEG00000015149	-	70	35.928
ENSLBEG00000004172	-	94	42.157	ENSLBEG00000026779	rab13	97	42.157
ENSLBEG00000004172	-	83	37.838	ENSLBEG00000014427	rab33a	81	37.838
ENSLBEG00000004172	-	73	39.877	ENSLBEG00000017798	-	78	39.877
ENSLBEG00000004172	-	100	62.385	ENSLBEG00000016446	rab25b	100	62.385
ENSLBEG00000004172	-	74	48.447	ENSLBEG00000004128	rab5c	89	42.365
ENSLBEG00000004172	-	79	38.506	ENSLBEG00000026777	rab33ba	76	38.506
ENSLBEG00000004172	-	100	86.636	ENSLBEG00000026857	rab11a	100	86.636
ENSLBEG00000004172	-	53	30.252	ENSLBEG00000012677	arl4cb	60	30.252
ENSLBEG00000004172	-	76	43.373	ENSLBEG00000013463	rab15	78	43.373
ENSLBEG00000004172	-	96	42.788	ENSLBEG00000001618	rab35b	99	42.788
ENSLBEG00000004172	-	96	46.154	ENSLBEG00000028426	RAB1A	99	46.154
ENSLBEG00000004172	-	73	39.877	ENSLBEG00000001796	RAB7A	78	39.877
ENSLBEG00000004172	-	74	43.478	ENSLBEG00000003235	rab22a	83	43.478
ENSLBEG00000004172	-	99	81.395	ENSLBEG00000016417	rab11al	99	81.395
ENSLBEG00000004172	-	77	32.370	ENSLBEG00000006152	-	84	32.370
ENSLBEG00000004172	-	92	39.801	ENSLBEG00000027539	-	86	39.801
ENSLBEG00000004172	-	96	43.602	ENSLBEG00000005791	-	99	43.602
ENSLBEG00000004172	-	77	51.497	ENSLBEG00000026790	-	78	51.497
ENSLBEG00000004172	-	72	35.669	ENSLBEG00000019372	rab6bb	75	35.669
ENSLBEG00000004172	-	77	44.970	ENSLBEG00000001313	RAB39B	79	44.970
ENSLBEG00000004172	-	70	34.839	ENSLBEG00000028450	kras	87	35.928
ENSLBEG00000004172	-	73	45.283	ENSLBEG00000026989	RAB15	75	45.283
ENSLBEG00000004172	-	100	92.166	ENSLBEG00000005981	-	100	92.166
ENSLBEG00000004172	-	70	34.641	ENSLBEG00000003132	rras	81	35.758
ENSLBEG00000004172	-	72	37.580	ENSLBEG00000008746	RAB41	74	37.580
ENSLBEG00000004172	-	94	32.093	ENSLBEG00000026006	rab34a	77	32.093

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000004172	-	100	96.789	ENSAPOG00000023455	rab11bb	100	96.789	Acanthochromis_polyacanthus
ENSLBEG00000004172	-	100	99.083	ENSACIG00000024376	-	100	99.083	Amphilophus_citrinellus
ENSLBEG00000004172	-	100	84.862	ENSACIG00000019631	rab11bb	100	84.862	Amphilophus_citrinellus
ENSLBEG00000004172	-	100	99.083	ENSAOCG00000018849	-	100	99.083	Amphiprion_ocellaris
ENSLBEG00000004172	-	100	96.789	ENSAOCG00000018239	rab11bb	100	96.789	Amphiprion_ocellaris
ENSLBEG00000004172	-	100	96.789	ENSAPEG00000016590	rab11bb	100	96.789	Amphiprion_percula
ENSLBEG00000004172	-	100	96.789	ENSATEG00000017696	rab11bb	100	96.789	Anabas_testudineus
ENSLBEG00000004172	-	100	98.624	ENSATEG00000023725	-	100	98.624	Anabas_testudineus
ENSLBEG00000004172	-	94	98.058	ENSAPLG00000011046	-	94	98.058	Anas_platyrhynchos
ENSLBEG00000004172	-	100	99.083	ENSACLG00000005446	-	100	99.083	Astatotilapia_calliptera
ENSLBEG00000004172	-	100	96.789	ENSACLG00000007076	rab11bb	100	96.789	Astatotilapia_calliptera
ENSLBEG00000004172	-	100	95.872	ENSAMXG00000037623	-	100	95.872	Astyanax_mexicanus
ENSLBEG00000004172	-	100	98.165	ENSAMXG00000042655	rab11bb	100	98.165	Astyanax_mexicanus
ENSLBEG00000004172	-	100	96.330	ENSBTAG00000002475	RAB11B	100	96.330	Bos_taurus
ENSLBEG00000004172	-	96	94.737	ENSCHIG00000022426	-	93	94.737	Capra_hircus
ENSLBEG00000004172	-	100	96.330	ENSCATG00000029188	-	100	96.330	Cercocebus_atys
ENSLBEG00000004172	-	100	97.248	ENSCPBG00000017056	-	100	97.248	Chrysemys_picta_bellii
ENSLBEG00000004172	-	100	96.789	ENSCSEG00000012149	rab11bb	100	96.789	Cynoglossus_semilaevis
ENSLBEG00000004172	-	100	98.624	ENSCSEG00000007239	-	100	98.624	Cynoglossus_semilaevis
ENSLBEG00000004172	-	100	98.165	ENSCVAG00000019718	-	100	98.165	Cyprinodon_variegatus
ENSLBEG00000004172	-	100	94.954	ENSCVAG00000019751	-	100	94.954	Cyprinodon_variegatus
ENSLBEG00000004172	-	100	96.789	ENSCVAG00000017021	-	100	96.789	Cyprinodon_variegatus
ENSLBEG00000004172	-	100	97.248	ENSDARG00000090086	rab11bb	100	97.248	Danio_rerio
ENSLBEG00000004172	-	99	94.009	ENSETEG00000000905	-	99	94.009	Echinops_telfairi
ENSLBEG00000004172	-	99	93.953	ENSEASG00005003708	-	99	93.953	Equus_asinus_asinus
ENSLBEG00000004172	-	99	93.953	ENSECAG00000000716	RAB11B	99	93.953	Equus_caballus
ENSLBEG00000004172	-	100	96.313	ENSELUG00000021148	rab11bb	100	96.313	Esox_lucius
ENSLBEG00000004172	-	100	98.618	ENSELUG00000020948	-	99	98.618	Esox_lucius
ENSLBEG00000004172	-	100	97.696	ENSELUG00000000916	-	100	97.696	Esox_lucius
ENSLBEG00000004172	-	100	97.248	ENSFALG00000011828	-	100	97.248	Ficedula_albicollis
ENSLBEG00000004172	-	100	98.624	ENSFHEG00000022676	-	100	98.624	Fundulus_heteroclitus
ENSLBEG00000004172	-	100	96.789	ENSFHEG00000018353	rab11bb	100	96.789	Fundulus_heteroclitus
ENSLBEG00000004172	-	100	96.789	ENSGMOG00000009211	rab11bb	100	96.789	Gadus_morhua
ENSLBEG00000004172	-	99	94.444	ENSGMOG00000009668	-	99	94.444	Gadus_morhua
ENSLBEG00000004172	-	100	97.248	ENSGALG00000000613	RAB11B	100	97.248	Gallus_gallus
ENSLBEG00000004172	-	100	96.789	ENSGAFG00000007102	rab11bb	100	96.789	Gambusia_affinis
ENSLBEG00000004172	-	100	96.330	ENSGACG00000015479	rab11bb	100	96.330	Gasterosteus_aculeatus
ENSLBEG00000004172	-	100	94.954	ENSGACG00000013297	-	99	94.954	Gasterosteus_aculeatus
ENSLBEG00000004172	-	100	96.330	ENSGGOG00000014516	RAB11B	100	96.330	Gorilla_gorilla
ENSLBEG00000004172	-	100	99.083	ENSHBUG00000009947	-	100	99.083	Haplochromis_burtoni
ENSLBEG00000004172	-	100	96.789	ENSHBUG00000014777	rab11bb	100	96.789	Haplochromis_burtoni
ENSLBEG00000004172	-	100	97.248	ENSHCOG00000002423	rab11bb	100	97.248	Hippocampus_comes
ENSLBEG00000004172	-	100	95.872	ENSHCOG00000000954	-	100	95.872	Hippocampus_comes
ENSLBEG00000004172	-	100	92.661	ENSHCOG00000000985	-	100	92.661	Hippocampus_comes
ENSLBEG00000004172	-	100	97.706	ENSIPUG00000019927	rab11bb	100	97.706	Ictalurus_punctatus
ENSLBEG00000004172	-	100	95.872	ENSIPUG00000025100	rab11b	100	95.872	Ictalurus_punctatus
ENSLBEG00000004172	-	100	99.083	ENSKMAG00000006170	-	100	99.083	Kryptolebias_marmoratus
ENSLBEG00000004172	-	100	96.789	ENSKMAG00000009033	rab11bb	100	96.789	Kryptolebias_marmoratus
ENSLBEG00000004172	-	100	97.248	ENSLACG00000016857	-	100	97.248	Latimeria_chalumnae
ENSLBEG00000004172	-	100	96.330	ENSMFAG00000003654	RAB11B	100	96.330	Macaca_fascicularis
ENSLBEG00000004172	-	100	96.330	ENSMLEG00000030601	-	100	96.330	Mandrillus_leucophaeus
ENSLBEG00000004172	-	100	97.706	ENSMAMG00000018533	-	100	97.706	Mastacembelus_armatus
ENSLBEG00000004172	-	100	96.330	ENSMAMG00000006378	rab11bb	100	96.330	Mastacembelus_armatus
ENSLBEG00000004172	-	100	99.083	ENSMZEG00005010975	-	100	99.083	Maylandia_zebra
ENSLBEG00000004172	-	100	96.789	ENSMZEG00005003352	rab11bb	100	96.789	Maylandia_zebra
ENSLBEG00000004172	-	100	96.330	ENSMICG00000034065	-	100	96.330	Microcebus_murinus
ENSLBEG00000004172	-	100	99.083	ENSMMOG00000001250	-	100	99.083	Mola_mola
ENSLBEG00000004172	-	99	94.931	ENSMMOG00000001238	-	99	94.931	Mola_mola
ENSLBEG00000004172	-	94	96.585	ENSMMOG00000007917	rab11bb	100	96.585	Mola_mola
ENSLBEG00000004172	-	100	97.248	ENSMODG00000003841	-	100	97.248	Monodelphis_domestica
ENSLBEG00000004172	-	100	96.789	ENSMALG00000022187	rab11bb	100	96.789	Monopterus_albus
ENSLBEG00000004172	-	94	88.406	ENSMLUG00000006677	-	100	88.406	Myotis_lucifugus
ENSLBEG00000004172	-	100	96.789	ENSNBRG00000000372	rab11bb	100	96.789	Neolamprologus_brichardi
ENSLBEG00000004172	-	100	99.083	ENSNBRG00000023885	-	100	99.083	Neolamprologus_brichardi
ENSLBEG00000004172	-	100	97.248	ENSMEUG00000003686	-	100	97.248	Notamacropus_eugenii
ENSLBEG00000004172	-	100	96.789	ENSONIG00000010435	rab11bb	100	96.789	Oreochromis_niloticus
ENSLBEG00000004172	-	100	99.083	ENSONIG00000002544	-	100	99.083	Oreochromis_niloticus
ENSLBEG00000004172	-	53	93.860	ENSOANG00000031567	-	82	93.860	Ornithorhynchus_anatinus
ENSLBEG00000004172	-	100	96.330	ENSORLG00000013938	rab11bb	100	96.330	Oryzias_latipes
ENSLBEG00000004172	-	99	97.235	ENSORLG00000015284	-	72	97.235	Oryzias_latipes
ENSLBEG00000004172	-	99	97.235	ENSORLG00020020844	RAB11B	99	97.235	Oryzias_latipes_hni
ENSLBEG00000004172	-	100	96.330	ENSORLG00020019393	rab11bb	100	96.330	Oryzias_latipes_hni
ENSLBEG00000004172	-	100	96.330	ENSORLG00015020173	rab11bb	100	96.330	Oryzias_latipes_hsok
ENSLBEG00000004172	-	99	97.235	ENSORLG00015016999	RAB11B	99	97.235	Oryzias_latipes_hsok
ENSLBEG00000004172	-	100	96.789	ENSOMEG00000017806	-	100	96.789	Oryzias_melastigma
ENSLBEG00000004172	-	100	98.165	ENSOMEG00000002562	-	100	98.165	Oryzias_melastigma
ENSLBEG00000004172	-	100	96.330	ENSPPAG00000028589	-	100	96.330	Pan_paniscus
ENSLBEG00000004172	-	100	96.330	ENSPTRG00000010422	RAB11B	100	96.330	Pan_troglodytes
ENSLBEG00000004172	-	100	96.330	ENSPANG00000007765	-	100	96.330	Papio_anubis
ENSLBEG00000004172	-	98	96.262	ENSPKIG00000001389	-	69	96.262	Paramormyrops_kingsleyae
ENSLBEG00000004172	-	100	96.330	ENSPKIG00000011703	-	100	96.330	Paramormyrops_kingsleyae
ENSLBEG00000004172	-	100	96.789	ENSPKIG00000011640	rab11bb	100	96.789	Paramormyrops_kingsleyae
ENSLBEG00000004172	-	98	93.151	ENSPSIG00000010242	-	85	93.151	Pelodiscus_sinensis
ENSLBEG00000004172	-	100	97.706	ENSPMGG00000014333	-	100	97.706	Periophthalmus_magnuspinnatus
ENSLBEG00000004172	-	99	94.009	ENSPMGG00000014336	-	99	94.009	Periophthalmus_magnuspinnatus
ENSLBEG00000004172	-	100	96.789	ENSPMGG00000009435	rab11bb	100	96.789	Periophthalmus_magnuspinnatus
ENSLBEG00000004172	-	97	96.698	ENSPCIG00000020371	-	99	96.698	Phascolarctos_cinereus
ENSLBEG00000004172	-	100	96.789	ENSPFOG00000024114	-	100	96.789	Poecilia_formosa
ENSLBEG00000004172	-	100	99.083	ENSPFOG00000006224	-	100	99.083	Poecilia_formosa
ENSLBEG00000004172	-	100	99.083	ENSPLAG00000014207	-	100	99.083	Poecilia_latipinna
ENSLBEG00000004172	-	100	96.789	ENSPLAG00000001598	rab11bb	100	96.789	Poecilia_latipinna
ENSLBEG00000004172	-	100	96.789	ENSPMEG00000012389	rab11bb	100	96.789	Poecilia_mexicana
ENSLBEG00000004172	-	100	99.083	ENSPMEG00000007842	-	100	99.083	Poecilia_mexicana
ENSLBEG00000004172	-	100	98.624	ENSPREG00000006336	-	100	98.624	Poecilia_reticulata
ENSLBEG00000004172	-	100	96.789	ENSPREG00000014269	rab11bb	100	96.789	Poecilia_reticulata
ENSLBEG00000004172	-	100	96.789	ENSPNYG00000004098	rab11bb	100	96.789	Pundamilia_nyererei
ENSLBEG00000004172	-	100	99.083	ENSPNYG00000019611	-	100	99.083	Pundamilia_nyererei
ENSLBEG00000004172	-	100	96.330	ENSRROG00000037812	-	100	96.330	Rhinopithecus_roxellana
ENSLBEG00000004172	-	97	96.226	ENSSHAG00000006816	-	97	96.226	Sarcophilus_harrisii
ENSLBEG00000004172	-	100	72.523	ENSSFOG00015006245	-	100	72.523	Scleropages_formosus
ENSLBEG00000004172	-	100	96.330	ENSSFOG00015009042	rab11bb	100	96.330	Scleropages_formosus
ENSLBEG00000004172	-	100	96.330	ENSSMAG00000004922	rab11bb	100	96.330	Scophthalmus_maximus
ENSLBEG00000004172	-	100	95.413	ENSSMAG00000018613	-	100	95.413	Scophthalmus_maximus
ENSLBEG00000004172	-	100	96.789	ENSSDUG00000013558	rab11bb	100	96.789	Seriola_dumerili
ENSLBEG00000004172	-	100	99.083	ENSSDUG00000002934	-	100	99.083	Seriola_dumerili
ENSLBEG00000004172	-	100	96.789	ENSSLDG00000020676	rab11bb	100	96.789	Seriola_lalandi_dorsalis
ENSLBEG00000004172	-	100	99.083	ENSSLDG00000005275	-	100	99.083	Seriola_lalandi_dorsalis
ENSLBEG00000004172	-	100	97.248	ENSSPUG00000002243	-	100	97.248	Sphenodon_punctatus
ENSLBEG00000004172	-	100	96.789	ENSSPAG00000011419	rab11bb	100	96.789	Stegastes_partitus
ENSLBEG00000004172	-	100	99.083	ENSSPAG00000014559	-	100	99.083	Stegastes_partitus
ENSLBEG00000004172	-	100	97.248	ENSTGUG00000000084	-	100	97.248	Taeniopygia_guttata
ENSLBEG00000004172	-	99	98.611	ENSTRUG00000021619	-	100	98.611	Takifugu_rubripes
ENSLBEG00000004172	-	99	94.931	ENSTRUG00000021614	-	99	94.931	Takifugu_rubripes
ENSLBEG00000004172	-	100	96.789	ENSTRUG00000022029	rab11bb	100	96.789	Takifugu_rubripes
ENSLBEG00000004172	-	99	94.470	ENSTNIG00000013184	-	99	94.470	Tetraodon_nigroviridis
ENSLBEG00000004172	-	99	98.611	ENSTNIG00000013182	-	100	98.611	Tetraodon_nigroviridis
ENSLBEG00000004172	-	100	95.872	ENSTNIG00000011081	rab11bb	100	95.872	Tetraodon_nigroviridis
ENSLBEG00000004172	-	93	96.059	ENSTNIG00000002003	-	100	96.059	Tetraodon_nigroviridis
ENSLBEG00000004172	-	94	97.073	ENSUAMG00000006639	-	99	97.073	Ursus_americanus
ENSLBEG00000004172	-	100	96.347	ENSXETG00000025484	rab11b.1	99	96.347	Xenopus_tropicalis
ENSLBEG00000004172	-	100	96.789	ENSXCOG00000008042	-	100	96.789	Xiphophorus_couchianus
ENSLBEG00000004172	-	100	99.083	ENSXCOG00000009190	-	100	99.083	Xiphophorus_couchianus
ENSLBEG00000004172	-	100	98.624	ENSXMAG00000024840	-	100	98.624	Xiphophorus_maculatus
ENSLBEG00000004172	-	100	96.789	ENSXMAG00000011926	rab11bb	100	96.789	Xiphophorus_maculatus