EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000004199 (Gene tree)
Gene ID: 109994105
Gene Symbol: tsen54
Alias: zgc:109927
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 6772 bases
Position: chrFKLU01000279.1:333791-340562
Accession: 109994105
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000005461	tRNA_int_end_N2	PF12928.7	4.6e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000005741	-	1707	XM_020647274	ENSLBEP00000005461	516 (aa)	XP_020502930	UPI0009B3DDE8

Gene Model

Click here to download ENSLBEG00000004199's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000004199's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000004199	tsen54	97	45.049	ENSG00000182173	TSEN54	100	65.278	Homo_sapiens
ENSLBEG00000004199	tsen54	100	73.143	ENSAPOG00000009659	tsen54	98	72.762	Acanthochromis_polyacanthus
ENSLBEG00000004199	tsen54	96	43.074	ENSAMEG00000009414	TSEN54	96	43.403	Ailuropoda_melanoleuca
ENSLBEG00000004199	tsen54	100	74.286	ENSAOCG00000000152	tsen54	98	73.333	Amphiprion_ocellaris
ENSLBEG00000004199	tsen54	100	72.952	ENSAPEG00000018931	tsen54	98	72.571	Amphiprion_percula
ENSLBEG00000004199	tsen54	100	71.241	ENSATEG00000019860	tsen54	100	71.429	Anabas_testudineus
ENSLBEG00000004199	tsen54	86	43.197	ENSAPLG00000009419	TSEN54	99	43.197	Anas_platyrhynchos
ENSLBEG00000004199	tsen54	97	46.125	ENSACAG00000006714	TSEN54	98	46.463	Anolis_carolinensis
ENSLBEG00000004199	tsen54	97	44.639	ENSANAG00000024061	TSEN54	96	44.272	Aotus_nancymaae
ENSLBEG00000004199	tsen54	100	70.342	ENSACLG00000019800	tsen54	100	70.532	Astatotilapia_calliptera
ENSLBEG00000004199	tsen54	97	56.311	ENSAMXG00000006546	tsen54	97	56.311	Astyanax_mexicanus
ENSLBEG00000004199	tsen54	97	43.436	ENSBTAG00000000824	TSEN54	97	43.870	Bos_taurus
ENSLBEG00000004199	tsen54	97	44.747	ENSCJAG00000014278	TSEN54	96	44.466	Callithrix_jacchus
ENSLBEG00000004199	tsen54	97	43.238	ENSCAFG00000004798	TSEN54	97	43.643	Canis_familiaris
ENSLBEG00000004199	tsen54	97	43.238	ENSCAFG00020000312	TSEN54	97	43.643	Canis_lupus_dingo
ENSLBEG00000004199	tsen54	97	45.294	ENSCHIG00000019908	TSEN54	97	44.902	Capra_hircus
ENSLBEG00000004199	tsen54	86	42.325	ENSTSYG00000037439	TSEN54	99	42.358	Carlito_syrichta
ENSLBEG00000004199	tsen54	97	44.854	ENSCCAG00000036624	TSEN54	96	44.466	Cebus_capucinus
ENSLBEG00000004199	tsen54	97	44.466	ENSCATG00000042877	TSEN54	96	44.078	Cercocebus_atys
ENSLBEG00000004199	tsen54	97	43.969	ENSCLAG00000002924	TSEN54	96	43.580	Chinchilla_lanigera
ENSLBEG00000004199	tsen54	97	44.466	ENSCSAG00000004809	TSEN54	97	44.078	Chlorocebus_sabaeus
ENSLBEG00000004199	tsen54	97	45.698	ENSCPBG00000028071	TSEN54	98	45.698	Chrysemys_picta_bellii
ENSLBEG00000004199	tsen54	97	44.942	ENSCANG00000028053	TSEN54	97	44.553	Colobus_angolensis_palliatus
ENSLBEG00000004199	tsen54	97	43.436	ENSCGRG00001020029	Tsen54	97	43.050	Cricetulus_griseus_chok1gshd
ENSLBEG00000004199	tsen54	84	41.463	ENSCGRG00000016289	Tsen54	99	41.020	Cricetulus_griseus_crigri
ENSLBEG00000004199	tsen54	81	53.901	ENSCSEG00000020586	tsen54	99	53.191	Cynoglossus_semilaevis
ENSLBEG00000004199	tsen54	81	53.756	ENSDARG00000036844	tsen54	100	54.695	Danio_rerio
ENSLBEG00000004199	tsen54	97	43.321	ENSDNOG00000018452	TSEN54	97	44.106	Dasypus_novemcinctus
ENSLBEG00000004199	tsen54	97	44.123	ENSDORG00000004073	Tsen54	97	44.358	Dipodomys_ordii
ENSLBEG00000004199	tsen54	96	31.638	ENSEBUG00000005203	TSEN54	70	43.125	Eptatretus_burgeri
ENSLBEG00000004199	tsen54	97	44.894	ENSEASG00005000579	TSEN54	97	44.509	Equus_asinus_asinus
ENSLBEG00000004199	tsen54	97	44.509	ENSECAG00000004924	TSEN54	97	44.123	Equus_caballus
ENSLBEG00000004199	tsen54	86	41.991	ENSEEUG00000008467	TSEN54	99	42.391	Erinaceus_europaeus
ENSLBEG00000004199	tsen54	99	57.196	ENSELUG00000017703	tsen54	92	57.856	Esox_lucius
ENSLBEG00000004199	tsen54	97	44.168	ENSFCAG00000023712	TSEN54	97	44.509	Felis_catus
ENSLBEG00000004199	tsen54	93	44.376	ENSFALG00000001119	TSEN54	92	44.490	Ficedula_albicollis
ENSLBEG00000004199	tsen54	86	43.167	ENSFDAG00000019090	TSEN54	99	42.516	Fukomys_damarensis
ENSLBEG00000004199	tsen54	100	66.985	ENSFHEG00000005470	tsen54	100	66.985	Fundulus_heteroclitus
ENSLBEG00000004199	tsen54	82	57.513	ENSGMOG00000013146	tsen54	99	57.513	Gadus_morhua
ENSLBEG00000004199	tsen54	93	41.379	ENSGALG00000047163	TSEN54	96	41.379	Gallus_gallus
ENSLBEG00000004199	tsen54	100	65.192	ENSGAFG00000005111	tsen54	100	65.000	Gambusia_affinis
ENSLBEG00000004199	tsen54	97	63.386	ENSGACG00000014987	tsen54	100	62.846	Gasterosteus_aculeatus
ENSLBEG00000004199	tsen54	97	45.489	ENSGAGG00000006825	TSEN54	96	45.681	Gopherus_agassizii
ENSLBEG00000004199	tsen54	96	44.834	ENSGGOG00000009417	TSEN54	99	44.444	Gorilla_gorilla
ENSLBEG00000004199	tsen54	90	68.697	ENSHBUG00000018296	tsen54	92	68.908	Haplochromis_burtoni
ENSLBEG00000004199	tsen54	97	44.636	ENSHGLG00000007979	TSEN54	97	44.444	Heterocephalus_glaber_female
ENSLBEG00000004199	tsen54	97	43.678	ENSHGLG00100005497	TSEN54	97	43.487	Heterocephalus_glaber_male
ENSLBEG00000004199	tsen54	81	58.865	ENSHCOG00000007481	tsen54	100	59.102	Hippocampus_comes
ENSLBEG00000004199	tsen54	97	51.267	ENSIPUG00000000590	tsen54	97	51.267	Ictalurus_punctatus
ENSLBEG00000004199	tsen54	97	43.605	ENSSTOG00000012883	TSEN54	97	43.411	Ictidomys_tridecemlineatus
ENSLBEG00000004199	tsen54	97	45.028	ENSJJAG00000007365	Tsen54	97	44.841	Jaculus_jaculus
ENSLBEG00000004199	tsen54	100	67.978	ENSKMAG00000006944	tsen54	100	67.978	Kryptolebias_marmoratus
ENSLBEG00000004199	tsen54	97	40.000	ENSLACG00000009497	TSEN54	99	40.192	Latimeria_chalumnae
ENSLBEG00000004199	tsen54	97	54.753	ENSLOCG00000011191	tsen54	97	54.563	Lepisosteus_oculatus
ENSLBEG00000004199	tsen54	92	43.002	ENSLAFG00000011655	TSEN54	92	43.522	Loxodonta_africana
ENSLBEG00000004199	tsen54	97	44.660	ENSMFAG00000000712	TSEN54	97	44.272	Macaca_fascicularis
ENSLBEG00000004199	tsen54	97	44.660	ENSMNEG00000029199	TSEN54	97	44.272	Macaca_nemestrina
ENSLBEG00000004199	tsen54	86	43.107	ENSMLEG00000044168	TSEN54	88	42.670	Mandrillus_leucophaeus
ENSLBEG00000004199	tsen54	100	71.042	ENSMAMG00000019773	tsen54	100	71.429	Mastacembelus_armatus
ENSLBEG00000004199	tsen54	100	69.962	ENSMZEG00005000884	tsen54	100	70.152	Maylandia_zebra
ENSLBEG00000004199	tsen54	93	40.882	ENSMGAG00000009556	TSEN54	92	41.851	Meleagris_gallopavo
ENSLBEG00000004199	tsen54	97	43.774	ENSMAUG00000016838	Tsen54	97	43.385	Mesocricetus_auratus
ENSLBEG00000004199	tsen54	97	43.212	ENSMICG00000044012	TSEN54	96	45.117	Microcebus_murinus
ENSLBEG00000004199	tsen54	97	43.738	ENSMOCG00000021585	Tsen54	97	43.353	Microtus_ochrogaster
ENSLBEG00000004199	tsen54	96	64.173	ENSMMOG00000020189	tsen54	99	64.567	Mola_mola
ENSLBEG00000004199	tsen54	97	42.966	ENSMODG00000007438	TSEN54	95	42.966	Monodelphis_domestica
ENSLBEG00000004199	tsen54	99	68.511	ENSMALG00000020573	tsen54	99	69.084	Monopterus_albus
ENSLBEG00000004199	tsen54	97	43.378	MGP_CAROLIEiJ_G0017417	Tsen54	97	42.994	Mus_caroli
ENSLBEG00000004199	tsen54	97	43.378	ENSMUSG00000020781	Tsen54	97	43.186	Mus_musculus
ENSLBEG00000004199	tsen54	97	43.178	MGP_PahariEiJ_G0018547	Tsen54	97	42.804	Mus_pahari
ENSLBEG00000004199	tsen54	97	43.186	MGP_SPRETEiJ_G0018262	Tsen54	97	42.912	Mus_spretus
ENSLBEG00000004199	tsen54	97	42.075	ENSMPUG00000013870	TSEN54	97	42.205	Mustela_putorius_furo
ENSLBEG00000004199	tsen54	97	41.843	ENSMLUG00000015298	TSEN54	96	42.466	Myotis_lucifugus
ENSLBEG00000004199	tsen54	97	44.487	ENSNGAG00000015673	Tsen54	97	44.487	Nannospalax_galili
ENSLBEG00000004199	tsen54	88	38.574	ENSMEUG00000011908	TSEN54	99	39.535	Notamacropus_eugenii
ENSLBEG00000004199	tsen54	97	41.300	ENSOPRG00000012513	TSEN54	96	40.883	Ochotona_princeps
ENSLBEG00000004199	tsen54	100	69.829	ENSONIG00000009543	tsen54	100	69.070	Oreochromis_niloticus
ENSLBEG00000004199	tsen54	97	40.812	ENSOCUG00000009875	TSEN54	97	40.971	Oryctolagus_cuniculus
ENSLBEG00000004199	tsen54	100	61.420	ENSORLG00000000852	tsen54	100	60.653	Oryzias_latipes
ENSLBEG00000004199	tsen54	100	61.420	ENSORLG00020018221	tsen54	100	60.653	Oryzias_latipes_hni
ENSLBEG00000004199	tsen54	98	62.231	ENSORLG00015009413	tsen54	99	61.448	Oryzias_latipes_hsok
ENSLBEG00000004199	tsen54	99	60.994	ENSOMEG00000014402	tsen54	98	60.612	Oryzias_melastigma
ENSLBEG00000004199	tsen54	97	43.945	ENSOGAG00000001442	TSEN54	97	43.945	Otolemur_garnettii
ENSLBEG00000004199	tsen54	86	40.305	ENSOARG00000010361	TSEN54	99	40.821	Ovis_aries
ENSLBEG00000004199	tsen54	94	44.711	ENSPPAG00000043519	TSEN54	99	44.622	Pan_paniscus
ENSLBEG00000004199	tsen54	97	44.168	ENSPPRG00000009162	TSEN54	97	44.509	Panthera_pardus
ENSLBEG00000004199	tsen54	86	42.763	ENSPTIG00000019312	TSEN54	96	42.982	Panthera_tigris_altaica
ENSLBEG00000004199	tsen54	97	45.049	ENSPTRG00000009646	TSEN54	97	44.660	Pan_troglodytes
ENSLBEG00000004199	tsen54	97	44.747	ENSPANG00000020133	TSEN54	96	44.358	Papio_anubis
ENSLBEG00000004199	tsen54	99	52.174	ENSPKIG00000023018	tsen54	99	52.482	Paramormyrops_kingsleyae
ENSLBEG00000004199	tsen54	81	41.309	ENSPSIG00000012807	TSEN54	100	41.309	Pelodiscus_sinensis
ENSLBEG00000004199	tsen54	93	46.138	ENSPMGG00000019578	tsen54	100	45.935	Periophthalmus_magnuspinnatus
ENSLBEG00000004199	tsen54	97	44.168	ENSPEMG00000014857	Tsen54	97	43.786	Peromyscus_maniculatus_bairdii
ENSLBEG00000004199	tsen54	100	65.649	ENSPFOG00000022740	tsen54	100	65.649	Poecilia_formosa
ENSLBEG00000004199	tsen54	100	65.962	ENSPLAG00000014847	tsen54	100	65.962	Poecilia_latipinna
ENSLBEG00000004199	tsen54	100	65.769	ENSPMEG00000022876	tsen54	100	65.769	Poecilia_mexicana
ENSLBEG00000004199	tsen54	100	65.577	ENSPREG00000013090	tsen54	100	65.577	Poecilia_reticulata
ENSLBEG00000004199	tsen54	91	42.620	ENSPPYG00000008629	TSEN54	99	43.035	Pongo_abelii
ENSLBEG00000004199	tsen54	70	61.146	ENSPCAG00000002093	TSEN54	73	61.146	Procavia_capensis
ENSLBEG00000004199	tsen54	97	43.048	ENSPCOG00000027880	TSEN54	97	44.509	Propithecus_coquereli
ENSLBEG00000004199	tsen54	97	44.023	ENSPVAG00000008446	TSEN54	97	44.466	Pteropus_vampyrus
ENSLBEG00000004199	tsen54	94	69.138	ENSPNYG00000010217	tsen54	100	69.339	Pundamilia_nyererei
ENSLBEG00000004199	tsen54	98	54.492	ENSPNAG00000003770	tsen54	98	54.599	Pygocentrus_nattereri
ENSLBEG00000004199	tsen54	97	44.402	ENSRNOG00000004598	Tsen54	97	44.402	Rattus_norvegicus
ENSLBEG00000004199	tsen54	97	44.466	ENSRBIG00000043040	TSEN54	97	44.078	Rhinopithecus_bieti
ENSLBEG00000004199	tsen54	97	44.466	ENSRROG00000030797	TSEN54	97	44.078	Rhinopithecus_roxellana
ENSLBEG00000004199	tsen54	97	41.715	ENSSBOG00000013543	TSEN54	96	41.553	Saimiri_boliviensis_boliviensis
ENSLBEG00000004199	tsen54	97	42.748	ENSSHAG00000018127	TSEN54	96	42.748	Sarcophilus_harrisii
ENSLBEG00000004199	tsen54	80	52.103	ENSSFOG00015004093	tsen54	99	51.869	Scleropages_formosus
ENSLBEG00000004199	tsen54	97	67.383	ENSSMAG00000012449	tsen54	98	67.969	Scophthalmus_maximus
ENSLBEG00000004199	tsen54	100	73.333	ENSSDUG00000021506	tsen54	100	73.333	Seriola_dumerili
ENSLBEG00000004199	tsen54	100	72.381	ENSSLDG00000016303	tsen54	100	72.381	Seriola_lalandi_dorsalis
ENSLBEG00000004199	tsen54	79	41.492	ENSSPUG00000008988	TSEN54	96	41.259	Sphenodon_punctatus
ENSLBEG00000004199	tsen54	93	71.079	ENSSPAG00000008098	-	100	70.468	Stegastes_partitus
ENSLBEG00000004199	tsen54	81	64.319	ENSSPAG00000008047	tsen54	100	64.085	Stegastes_partitus
ENSLBEG00000004199	tsen54	97	44.553	ENSSSCG00000036852	TSEN54	97	44.553	Sus_scrofa
ENSLBEG00000004199	tsen54	86	43.736	ENSTGUG00000008548	TSEN54	99	43.736	Taeniopygia_guttata
ENSLBEG00000004199	tsen54	100	65.517	ENSTRUG00000004230	tsen54	100	64.943	Takifugu_rubripes
ENSLBEG00000004199	tsen54	97	63.095	ENSTNIG00000011281	tsen54	98	65.278	Tetraodon_nigroviridis
ENSLBEG00000004199	tsen54	86	41.522	ENSTTRG00000015828	TSEN54	99	41.522	Tursiops_truncatus
ENSLBEG00000004199	tsen54	80	40.596	ENSUAMG00000010045	TSEN54	80	60.000	Ursus_americanus
ENSLBEG00000004199	tsen54	83	41.071	ENSUMAG00000008979	TSEN54	99	41.871	Ursus_maritimus
ENSLBEG00000004199	tsen54	96	43.077	ENSVVUG00000011411	TSEN54	97	43.870	Vulpes_vulpes
ENSLBEG00000004199	tsen54	97	42.690	ENSXETG00000012532	tsen54	100	60.000	Xenopus_tropicalis
ENSLBEG00000004199	tsen54	97	57.708	ENSXCOG00000018245	tsen54	100	60.941	Xiphophorus_couchianus
ENSLBEG00000004199	tsen54	100	65.385	ENSXMAG00000018818	tsen54	100	65.000	Xiphophorus_maculatus