EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000004399 (Gene tree)
Gene ID: 109992909
Gene Symbol: setd1a
Alias: -
Full Name: histone-lysine N-methyltransferase SETD1B-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 21762 bases
Position: chrFKLU01000244.1:454742-476503
Accession: 109992909
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000005705	RRM_1	PF00076.22	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000005999	-	11823	XM_020645688	ENSLBEP00000005705	2217 (aa)	XP_020501344	UPI0009B35060

Gene Model

Click here to download ENSLBEG00000004399's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000004399's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000004399	setd1a	64	58.449	ENSLBEG00000020113	setd1ba	60	58.449

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000004399	setd1a	86	82.014	ENSAPOG00000018002	setd1a	75	96.020	Acanthochromis_polyacanthus
ENSLBEG00000004399	setd1a	76	89.342	ENSACIG00000007144	setd1a	99	89.342	Amphilophus_citrinellus
ENSLBEG00000004399	setd1a	100	83.088	ENSAOCG00000003663	setd1a	68	83.138	Amphiprion_ocellaris
ENSLBEG00000004399	setd1a	100	80.599	ENSATEG00000022798	setd1a	69	80.443	Anabas_testudineus
ENSLBEG00000004399	setd1a	100	83.430	ENSACLG00000024747	setd1a	69	80.822	Astatotilapia_calliptera
ENSLBEG00000004399	setd1a	100	77.419	ENSCSEG00000021605	setd1a	69	76.747	Cynoglossus_semilaevis
ENSLBEG00000004399	setd1a	69	75.212	ENSCVAG00000011672	setd1a	69	75.522	Cyprinodon_variegatus
ENSLBEG00000004399	setd1a	90	73.293	ENSFHEG00000023258	setd1a	69	84.127	Fundulus_heteroclitus
ENSLBEG00000004399	setd1a	58	92.593	ENSGAFG00000011698	setd1a	82	92.593	Gambusia_affinis
ENSLBEG00000004399	setd1a	79	86.612	ENSGACG00000013688	setd1a	89	87.037	Gasterosteus_aculeatus
ENSLBEG00000004399	setd1a	100	83.565	ENSHBUG00000008893	setd1a	69	81.213	Haplochromis_burtoni
ENSLBEG00000004399	setd1a	74	84.659	ENSHCOG00000003119	setd1a	95	84.659	Hippocampus_comes
ENSLBEG00000004399	setd1a	100	78.997	ENSKMAG00000009484	setd1a	69	78.198	Kryptolebias_marmoratus
ENSLBEG00000004399	setd1a	71	88.235	ENSMAMG00000021851	setd1a	98	88.192	Mastacembelus_armatus
ENSLBEG00000004399	setd1a	100	83.475	ENSMZEG00005023141	setd1a	69	80.940	Maylandia_zebra
ENSLBEG00000004399	setd1a	74	85.099	ENSMMOG00000016992	setd1a	92	91.404	Mola_mola
ENSLBEG00000004399	setd1a	99	74.048	ENSMALG00000007401	setd1a	69	75.867	Monopterus_albus
ENSLBEG00000004399	setd1a	74	78.537	ENSNBRG00000004760	setd1a	75	76.872	Neolamprologus_brichardi
ENSLBEG00000004399	setd1a	69	76.190	ENSORLG00000002213	setd1a	100	75.168	Oryzias_latipes
ENSLBEG00000004399	setd1a	69	76.402	ENSORLG00020011897	setd1a	100	75.157	Oryzias_latipes_hni
ENSLBEG00000004399	setd1a	69	76.597	ENSORLG00015004826	setd1a	100	75.291	Oryzias_latipes_hsok
ENSLBEG00000004399	setd1a	100	75.539	ENSOMEG00000019732	setd1a	75	74.345	Oryzias_melastigma
ENSLBEG00000004399	setd1a	50	67.230	ENSOGAG00000028006	-	52	72.973	Otolemur_garnettii
ENSLBEG00000004399	setd1a	100	73.500	ENSPFOG00000013669	setd1a	70	73.859	Poecilia_formosa
ENSLBEG00000004399	setd1a	100	75.045	ENSPLAG00000009294	setd1a	100	74.406	Poecilia_latipinna
ENSLBEG00000004399	setd1a	100	75.134	ENSPMEG00000005864	setd1a	100	74.284	Poecilia_mexicana
ENSLBEG00000004399	setd1a	100	74.664	ENSPREG00000010201	setd1a	100	74.396	Poecilia_reticulata
ENSLBEG00000004399	setd1a	100	82.848	ENSPNYG00000014139	setd1a	69	80.626	Pundamilia_nyererei
ENSLBEG00000004399	setd1a	100	80.519	ENSSMAG00000008846	setd1a	100	81.012	Scophthalmus_maximus
ENSLBEG00000004399	setd1a	69	83.713	ENSSDUG00000022142	setd1a	100	84.674	Seriola_dumerili
ENSLBEG00000004399	setd1a	69	83.648	ENSSLDG00000018250	setd1a	100	84.540	Seriola_lalandi_dorsalis
ENSLBEG00000004399	setd1a	69	84.475	ENSSPAG00000007822	setd1a	68	84.866	Stegastes_partitus
ENSLBEG00000004399	setd1a	77	84.355	ENSTRUG00000008953	setd1a	92	83.510	Takifugu_rubripes
ENSLBEG00000004399	setd1a	79	93.711	ENSTNIG00000014930	setd1a	90	89.096	Tetraodon_nigroviridis
ENSLBEG00000004399	setd1a	95	75.811	ENSXCOG00000017585	setd1a	97	74.961	Xiphophorus_couchianus
ENSLBEG00000004399	setd1a	100	75.112	ENSXMAG00000008021	setd1a	100	74.217	Xiphophorus_maculatus