EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000004417 (Gene tree)
Gene ID: 109983091
Gene Symbol: -
Alias: -
Full Name: 2'%2C3'-cyclic nucleotide 3' phosphodiesterase
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 6783 bases
Position: chrFKLU01000050.1:557290-564072
Accession: 109983091
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000005730	CNPase	PF05881.12	2.3e-112	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000006025	-	4665	XM_020632622	ENSLBEP00000005730	994 (aa)	XP_020488278	-

Gene Model

Click here to download ENSLBEG00000004417's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000004417's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000004417	-	64	74.201	ENSAPOG00000000586	CNP	100	77.737	Acanthochromis_polyacanthus
ENSLBEG00000004417	-	69	71.642	ENSACIG00000010353	CNP	99	80.827	Amphilophus_citrinellus
ENSLBEG00000004417	-	85	61.338	ENSAOCG00000012107	CNP	100	60.778	Amphiprion_ocellaris
ENSLBEG00000004417	-	76	70.287	ENSAPEG00000004626	CNP	100	61.873	Amphiprion_percula
ENSLBEG00000004417	-	66	75.878	ENSATEG00000001565	CNP	98	75.878	Anabas_testudineus
ENSLBEG00000004417	-	70	71.218	ENSACLG00000002493	CNP	100	64.758	Astatotilapia_calliptera
ENSLBEG00000004417	-	61	68.632	ENSCSEG00000016323	CNP	98	75.126	Cynoglossus_semilaevis
ENSLBEG00000004417	-	88	56.426	ENSCVAG00000009329	CNP	98	56.426	Cyprinodon_variegatus
ENSLBEG00000004417	-	51	63.725	ENSELUG00000018311	-	85	64.093	Esox_lucius
ENSLBEG00000004417	-	73	60.928	ENSFHEG00000012297	CNP	93	69.647	Fundulus_heteroclitus
ENSLBEG00000004417	-	84	55.919	ENSGAFG00000001088	CNP	100	55.589	Gambusia_affinis
ENSLBEG00000004417	-	69	72.650	ENSHBUG00000001895	CNP	100	65.709	Haplochromis_burtoni
ENSLBEG00000004417	-	71	65.377	ENSKMAG00000020217	CNP	99	66.457	Kryptolebias_marmoratus
ENSLBEG00000004417	-	70	78.621	ENSMAMG00000022301	CNP	95	80.095	Mastacembelus_armatus
ENSLBEG00000004417	-	70	71.429	ENSMZEG00005022756	CNP	100	64.937	Maylandia_zebra
ENSLBEG00000004417	-	82	73.123	ENSMALG00000006914	CNP	100	72.332	Monopterus_albus
ENSLBEG00000004417	-	90	55.540	ENSNBRG00000018997	CNP	100	59.685	Neolamprologus_brichardi
ENSLBEG00000004417	-	92	56.472	ENSONIG00000001073	CNP	99	80.377	Oreochromis_niloticus
ENSLBEG00000004417	-	83	57.477	ENSORLG00000026570	CNP	100	57.477	Oryzias_latipes
ENSLBEG00000004417	-	87	58.521	ENSORLG00020008668	CNP	100	58.521	Oryzias_latipes_hni
ENSLBEG00000004417	-	89	57.632	ENSORLG00015000871	CNP	100	57.632	Oryzias_latipes_hsok
ENSLBEG00000004417	-	58	73.697	ENSOMEG00000022908	CNP	89	73.697	Oryzias_melastigma
ENSLBEG00000004417	-	77	61.594	ENSPFOG00000023789	CNP	100	59.932	Poecilia_formosa
ENSLBEG00000004417	-	78	61.496	ENSPLAG00000021778	CNP	100	59.828	Poecilia_latipinna
ENSLBEG00000004417	-	78	61.441	ENSPMEG00000011481	CNP	100	59.863	Poecilia_mexicana
ENSLBEG00000004417	-	78	62.250	ENSPREG00000010590	CNP	100	62.250	Poecilia_reticulata
ENSLBEG00000004417	-	70	70.588	ENSPNYG00000011312	CNP	100	64.222	Pundamilia_nyererei
ENSLBEG00000004417	-	80	73.725	ENSSMAG00000007666	-	100	73.725	Scophthalmus_maximus
ENSLBEG00000004417	-	76	79.388	ENSSDUG00000022943	-	99	80.000	Seriola_dumerili
ENSLBEG00000004417	-	74	80.126	ENSSLDG00000017502	-	99	79.633	Seriola_lalandi_dorsalis
ENSLBEG00000004417	-	63	80.741	ENSSPAG00000006727	cnp	92	80.788	Stegastes_partitus
ENSLBEG00000004417	-	69	71.076	ENSTRUG00000022019	CNP	94	72.261	Takifugu_rubripes
ENSLBEG00000004417	-	66	68.119	ENSXMAG00000008845	-	84	58.117	Xiphophorus_maculatus