EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000004545 (Gene tree)
Gene ID: 109987761
Gene Symbol: hnrnpm
Alias: si:ch211-197g15.1|wu:fa10g07|wu:fa98b02
Full Name: heterogeneous nuclear ribonucleoprotein M-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 7731 bases
Position: chrFKLU01000123.1:317992-325722
Accession: 109987761
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000005955	RRM_1	PF00076.22	6.6e-51	1	3
ENSLBEP00000005955	RRM_1	PF00076.22	6.6e-51	2	3
ENSLBEP00000005955	RRM_1	PF00076.22	6.6e-51	3	3
ENSLBEP00000005913	RRM_1	PF00076.22	7.5e-51	1	3
ENSLBEP00000005913	RRM_1	PF00076.22	7.5e-51	2	3
ENSLBEP00000005913	RRM_1	PF00076.22	7.5e-51	3	3
ENSLBEP00000005894	RRM_1	PF00076.22	8.1e-51	1	3
ENSLBEP00000005894	RRM_1	PF00076.22	8.1e-51	2	3
ENSLBEP00000005894	RRM_1	PF00076.22	8.1e-51	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000006195	-	3324	XM_020638963	ENSLBEP00000005894	713 (aa)	XP_020494619	-
ENSLBET00000006214	-	3285	XM_020638965	ENSLBEP00000005913	700 (aa)	XP_020494621	-
ENSLBET00000006256	-	3222	XM_020638964	ENSLBEP00000005955	679 (aa)	XP_020494620	-

Gene Model

Click here to download ENSLBEG00000004545's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000004545's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000004545	hnrnpm	83	59.701	ENSLBEG00000005649	myef2	94	57.143

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000004545	hnrnpm	86	68.966	ENSG00000099783	HNRNPM	79	85.000	Homo_sapiens
ENSLBEG00000004545	hnrnpm	92	81.920	ENSAPOG00000001463	hnrnpm	97	69.331	Acanthochromis_polyacanthus
ENSLBEG00000004545	hnrnpm	95	50.882	ENSAMEG00000004979	HNRNPM	82	65.359	Ailuropoda_melanoleuca
ENSLBEG00000004545	hnrnpm	100	81.604	ENSACIG00000011870	hnrnpm	100	74.502	Amphilophus_citrinellus
ENSLBEG00000004545	hnrnpm	96	84.425	ENSAOCG00000008519	hnrnpm	100	78.932	Amphiprion_ocellaris
ENSLBEG00000004545	hnrnpm	100	83.939	ENSAPEG00000004257	hnrnpm	100	78.255	Amphiprion_percula
ENSLBEG00000004545	hnrnpm	100	81.678	ENSATEG00000008976	hnrnpm	100	82.378	Anabas_testudineus
ENSLBEG00000004545	hnrnpm	95	50.000	ENSAPLG00000010149	HNRNPM	80	66.071	Anas_platyrhynchos
ENSLBEG00000004545	hnrnpm	87	65.546	ENSANAG00000019489	-	57	74.603	Aotus_nancymaae
ENSLBEG00000004545	hnrnpm	86	68.966	ENSANAG00000025358	HNRNPM	86	75.177	Aotus_nancymaae
ENSLBEG00000004545	hnrnpm	100	77.701	ENSACLG00000020495	hnrnpm	100	80.603	Astatotilapia_calliptera
ENSLBEG00000004545	hnrnpm	72	75.954	ENSAMXG00000016073	hnrnpm	99	73.836	Astyanax_mexicanus
ENSLBEG00000004545	hnrnpm	86	69.828	ENSBTAG00000021039	HNRNPM	78	77.600	Bos_taurus
ENSLBEG00000004545	hnrnpm	86	69.828	ENSCJAG00000010802	HNRNPM	83	75.177	Callithrix_jacchus
ENSLBEG00000004545	hnrnpm	86	69.828	ENSCAFG00000018524	HNRNPM	71	77.600	Canis_familiaris
ENSLBEG00000004545	hnrnpm	83	69.231	ENSCAFG00020022128	HNRNPM	80	77.600	Canis_lupus_dingo
ENSLBEG00000004545	hnrnpm	86	69.828	ENSCHIG00000026313	HNRNPM	76	77.600	Capra_hircus
ENSLBEG00000004545	hnrnpm	86	68.966	ENSTSYG00000011487	-	84	77.564	Carlito_syrichta
ENSLBEG00000004545	hnrnpm	85	61.062	ENSTSYG00000037074	-	75	71.200	Carlito_syrichta
ENSLBEG00000004545	hnrnpm	86	59.664	ENSTSYG00000030502	-	68	60.870	Carlito_syrichta
ENSLBEG00000004545	hnrnpm	86	68.966	ENSCPOG00000015182	HNRNPM	81	77.600	Cavia_porcellus
ENSLBEG00000004545	hnrnpm	74	66.667	ENSCCAG00000018580	-	64	66.667	Cebus_capucinus
ENSLBEG00000004545	hnrnpm	87	63.063	ENSCCAG00000018782	HNRNPM	86	75.177	Cebus_capucinus
ENSLBEG00000004545	hnrnpm	86	68.966	ENSCATG00000035478	HNRNPM	81	77.600	Cercocebus_atys
ENSLBEG00000004545	hnrnpm	86	68.966	ENSCLAG00000011194	-	81	77.600	Chinchilla_lanigera
ENSLBEG00000004545	hnrnpm	85	64.423	ENSCLAG00000003049	-	72	62.069	Chinchilla_lanigera
ENSLBEG00000004545	hnrnpm	87	65.323	ENSCSAG00000008009	HNRNPM	82	77.600	Chlorocebus_sabaeus
ENSLBEG00000004545	hnrnpm	95	50.337	ENSCHOG00000013627	HNRNPM	82	65.359	Choloepus_hoffmanni
ENSLBEG00000004545	hnrnpm	92	52.018	ENSCPBG00000017052	-	74	65.066	Chrysemys_picta_bellii
ENSLBEG00000004545	hnrnpm	86	68.966	ENSCANG00000043491	HNRNPM	85	77.600	Colobus_angolensis_palliatus
ENSLBEG00000004545	hnrnpm	90	50.000	ENSCGRG00001012021	-	82	64.262	Cricetulus_griseus_chok1gshd
ENSLBEG00000004545	hnrnpm	97	42.686	ENSCGRG00001004486	-	72	55.172	Cricetulus_griseus_chok1gshd
ENSLBEG00000004545	hnrnpm	84	57.282	ENSCGRG00001004249	-	74	57.282	Cricetulus_griseus_chok1gshd
ENSLBEG00000004545	hnrnpm	86	69.828	ENSCGRG00001022655	-	77	71.429	Cricetulus_griseus_chok1gshd
ENSLBEG00000004545	hnrnpm	95	42.878	ENSCGRG00001008003	-	51	37.576	Cricetulus_griseus_chok1gshd
ENSLBEG00000004545	hnrnpm	97	42.686	ENSCGRG00000003596	-	72	55.172	Cricetulus_griseus_crigri
ENSLBEG00000004545	hnrnpm	86	67.241	ENSCGRG00000012441	-	81	74.400	Cricetulus_griseus_crigri
ENSLBEG00000004545	hnrnpm	85	69.828	ENSCGRG00000010065	-	77	69.828	Cricetulus_griseus_crigri
ENSLBEG00000004545	hnrnpm	95	42.878	ENSCGRG00000012006	-	51	37.576	Cricetulus_griseus_crigri
ENSLBEG00000004545	hnrnpm	100	78.303	ENSCSEG00000014980	hnrnpm	100	73.040	Cynoglossus_semilaevis
ENSLBEG00000004545	hnrnpm	96	80.612	ENSCVAG00000020838	hnrnpm	100	69.947	Cyprinodon_variegatus
ENSLBEG00000004545	hnrnpm	73	71.028	ENSDARG00000061735	hnrnpm	100	68.864	Danio_rerio
ENSLBEG00000004545	hnrnpm	86	69.828	ENSDNOG00000012157	HNRNPM	71	77.600	Dasypus_novemcinctus
ENSLBEG00000004545	hnrnpm	86	68.966	ENSDORG00000008105	Hnrnpm	81	77.600	Dipodomys_ordii
ENSLBEG00000004545	hnrnpm	95	50.340	ENSETEG00000019712	HNRNPM	82	65.359	Echinops_telfairi
ENSLBEG00000004545	hnrnpm	86	69.828	ENSEASG00005022434	HNRNPM	76	77.600	Equus_asinus_asinus
ENSLBEG00000004545	hnrnpm	86	69.828	ENSECAG00000023868	HNRNPM	73	77.600	Equus_caballus
ENSLBEG00000004545	hnrnpm	96	77.633	ENSELUG00000021183	hnrnpm	98	78.644	Esox_lucius
ENSLBEG00000004545	hnrnpm	95	49.113	ENSFCAG00000015218	HNRNPM	82	64.052	Felis_catus
ENSLBEG00000004545	hnrnpm	82	69.231	ENSFALG00000001059	HNRNPM	77	77.600	Ficedula_albicollis
ENSLBEG00000004545	hnrnpm	86	68.966	ENSFDAG00000014680	HNRNPM	76	77.600	Fukomys_damarensis
ENSLBEG00000004545	hnrnpm	100	78.881	ENSFHEG00000006712	hnrnpm	96	72.765	Fundulus_heteroclitus
ENSLBEG00000004545	hnrnpm	96	71.140	ENSGMOG00000009724	hnrnpm	57	76.712	Gadus_morhua
ENSLBEG00000004545	hnrnpm	95	50.668	ENSGALG00000000377	HNRNPM	90	65.371	Gallus_gallus
ENSLBEG00000004545	hnrnpm	95	79.281	ENSGACG00000010265	hnrnpm	52	81.416	Gasterosteus_aculeatus
ENSLBEG00000004545	hnrnpm	92	51.271	ENSGAGG00000019124	-	78	65.066	Gopherus_agassizii
ENSLBEG00000004545	hnrnpm	86	68.966	ENSGGOG00000003498	HNRNPM	81	77.600	Gorilla_gorilla
ENSLBEG00000004545	hnrnpm	96	79.595	ENSHBUG00000023451	hnrnpm	100	83.213	Haplochromis_burtoni
ENSLBEG00000004545	hnrnpm	84	70.588	ENSHGLG00000009796	-	76	73.333	Heterocephalus_glaber_female
ENSLBEG00000004545	hnrnpm	86	68.966	ENSHGLG00100006675	-	81	77.600	Heterocephalus_glaber_male
ENSLBEG00000004545	hnrnpm	96	78.426	ENSHCOG00000019984	hnrnpm	100	70.629	Hippocampus_comes
ENSLBEG00000004545	hnrnpm	99	71.167	ENSIPUG00000025097	hnrnpm	96	73.227	Ictalurus_punctatus
ENSLBEG00000004545	hnrnpm	86	68.966	ENSSTOG00000008112	HNRNPM	81	77.600	Ictidomys_tridecemlineatus
ENSLBEG00000004545	hnrnpm	86	68.103	ENSJJAG00000017319	Hnrnpm	81	76.800	Jaculus_jaculus
ENSLBEG00000004545	hnrnpm	97	73.132	ENSLOCG00000004456	hnrnpm	98	66.667	Lepisosteus_oculatus
ENSLBEG00000004545	hnrnpm	94	53.162	ENSLAFG00000013603	HNRNPM	97	65.563	Loxodonta_africana
ENSLBEG00000004545	hnrnpm	86	68.966	ENSMFAG00000037617	HNRNPM	81	77.600	Macaca_fascicularis
ENSLBEG00000004545	hnrnpm	86	69.828	ENSMMUG00000018806	HNRNPM	84	76.923	Macaca_mulatta
ENSLBEG00000004545	hnrnpm	86	69.828	ENSMNEG00000036546	HNRNPM	83	77.600	Macaca_nemestrina
ENSLBEG00000004545	hnrnpm	86	68.966	ENSMLEG00000042113	HNRNPM	81	77.600	Mandrillus_leucophaeus
ENSLBEG00000004545	hnrnpm	100	82.446	ENSMAMG00000005612	hnrnpm	100	80.933	Mastacembelus_armatus
ENSLBEG00000004545	hnrnpm	100	81.103	ENSMZEG00005002512	hnrnpm	100	74.040	Maylandia_zebra
ENSLBEG00000004545	hnrnpm	95	50.732	ENSMGAG00000000700	HNRNPM	96	65.371	Meleagris_gallopavo
ENSLBEG00000004545	hnrnpm	86	68.966	ENSMAUG00000017476	Hnrnpm	81	77.600	Mesocricetus_auratus
ENSLBEG00000004545	hnrnpm	83	69.444	ENSMICG00000028503	-	88	75.200	Microcebus_murinus
ENSLBEG00000004545	hnrnpm	86	65.517	ENSMICG00000002532	-	83	74.576	Microcebus_murinus
ENSLBEG00000004545	hnrnpm	86	68.966	ENSMOCG00000005769	Hnrnpm	81	77.600	Microtus_ochrogaster
ENSLBEG00000004545	hnrnpm	100	80.645	ENSMMOG00000019610	hnrnpm	100	70.968	Mola_mola
ENSLBEG00000004545	hnrnpm	86	66.667	ENSMODG00000003473	-	80	66.667	Monodelphis_domestica
ENSLBEG00000004545	hnrnpm	95	52.126	ENSMODG00000003801	-	82	65.359	Monodelphis_domestica
ENSLBEG00000004545	hnrnpm	87	65.323	MGP_CAROLIEiJ_G0021413	Hnrnpm	80	77.600	Mus_caroli
ENSLBEG00000004545	hnrnpm	87	65.323	ENSMUSG00000059208	Hnrnpm	86	78.049	Mus_musculus
ENSLBEG00000004545	hnrnpm	87	65.323	MGP_PahariEiJ_G0020418	Hnrnpm	80	77.600	Mus_pahari
ENSLBEG00000004545	hnrnpm	87	65.323	MGP_SPRETEiJ_G0022325	Hnrnpm	80	76.000	Mus_spretus
ENSLBEG00000004545	hnrnpm	86	68.966	ENSMLUG00000006696	-	80	77.600	Myotis_lucifugus
ENSLBEG00000004545	hnrnpm	86	67.241	ENSMLUG00000025231	-	88	83.824	Myotis_lucifugus
ENSLBEG00000004545	hnrnpm	86	49.138	ENSNGAG00000017657	-	90	62.400	Nannospalax_galili
ENSLBEG00000004545	hnrnpm	86	68.966	ENSNGAG00000003707	Hnrnpm	78	77.600	Nannospalax_galili
ENSLBEG00000004545	hnrnpm	100	78.750	ENSNBRG00000015999	hnrnpm	99	84.104	Neolamprologus_brichardi
ENSLBEG00000004545	hnrnpm	95	50.273	ENSMEUG00000004789	HNRNPM	82	60.784	Notamacropus_eugenii
ENSLBEG00000004545	hnrnpm	86	73.239	ENSOPRG00000001943	HNRNPM	68	73.239	Ochotona_princeps
ENSLBEG00000004545	hnrnpm	87	58.871	ENSODEG00000009194	-	78	59.350	Octodon_degus
ENSLBEG00000004545	hnrnpm	84	67.327	ENSODEG00000004347	-	73	67.327	Octodon_degus
ENSLBEG00000004545	hnrnpm	96	50.295	ENSODEG00000010314	-	93	63.141	Octodon_degus
ENSLBEG00000004545	hnrnpm	70	44.186	ENSODEG00000011442	-	59	41.602	Octodon_degus
ENSLBEG00000004545	hnrnpm	100	80.221	ENSONIG00000001758	hnrnpm	100	79.115	Oreochromis_niloticus
ENSLBEG00000004545	hnrnpm	81	45.474	ENSOANG00000010259	HNRNPM	72	48.529	Ornithorhynchus_anatinus
ENSLBEG00000004545	hnrnpm	54	62.630	ENSOANG00000005883	-	95	63.103	Ornithorhynchus_anatinus
ENSLBEG00000004545	hnrnpm	61	45.149	ENSOCUG00000023204	-	95	45.594	Oryctolagus_cuniculus
ENSLBEG00000004545	hnrnpm	86	68.966	ENSOCUG00000000552	-	75	77.600	Oryctolagus_cuniculus
ENSLBEG00000004545	hnrnpm	96	80.233	ENSORLG00000005400	hnrnpm	99	80.959	Oryzias_latipes
ENSLBEG00000004545	hnrnpm	96	80.204	ENSORLG00020022108	hnrnpm	100	80.932	Oryzias_latipes_hni
ENSLBEG00000004545	hnrnpm	98	79.090	ENSORLG00015019809	hnrnpm	98	80.959	Oryzias_latipes_hsok
ENSLBEG00000004545	hnrnpm	100	78.947	ENSOMEG00000013075	hnrnpm	100	74.862	Oryzias_melastigma
ENSLBEG00000004545	hnrnpm	51	61.111	ENSOGAG00000032900	-	56	46.610	Otolemur_garnettii
ENSLBEG00000004545	hnrnpm	86	68.966	ENSOGAG00000030987	HNRNPM	80	77.600	Otolemur_garnettii
ENSLBEG00000004545	hnrnpm	86	69.828	ENSOARG00000003961	HNRNPM	71	77.600	Ovis_aries
ENSLBEG00000004545	hnrnpm	86	65.517	ENSPPAG00000039365	HNRNPM	82	65.359	Pan_paniscus
ENSLBEG00000004545	hnrnpm	86	68.966	ENSPPRG00000009284	HNRNPM	81	77.600	Panthera_pardus
ENSLBEG00000004545	hnrnpm	86	68.966	ENSPTIG00000003024	HNRNPM	70	68.966	Panthera_tigris_altaica
ENSLBEG00000004545	hnrnpm	86	65.517	ENSPTRG00000010424	HNRNPM	82	65.359	Pan_troglodytes
ENSLBEG00000004545	hnrnpm	86	68.966	ENSPANG00000000283	HNRNPM	81	77.600	Papio_anubis
ENSLBEG00000004545	hnrnpm	99	70.339	ENSPKIG00000001332	hnrnpm	99	68.276	Paramormyrops_kingsleyae
ENSLBEG00000004545	hnrnpm	95	51.475	ENSPSIG00000011477	HNRNPM	58	48.718	Pelodiscus_sinensis
ENSLBEG00000004545	hnrnpm	86	68.966	ENSPEMG00000009260	Hnrnpm	81	77.600	Peromyscus_maniculatus_bairdii
ENSLBEG00000004545	hnrnpm	88	64.655	ENSPCIG00000020115	HNRNPM	83	77.600	Phascolarctos_cinereus
ENSLBEG00000004545	hnrnpm	99	76.479	ENSPFOG00000013612	hnrnpm	100	79.466	Poecilia_formosa
ENSLBEG00000004545	hnrnpm	96	71.970	ENSPMEG00000011182	hnrnpm	98	76.453	Poecilia_mexicana
ENSLBEG00000004545	hnrnpm	100	78.147	ENSPREG00000016114	hnrnpm	100	70.745	Poecilia_reticulata
ENSLBEG00000004545	hnrnpm	86	68.966	ENSPPYG00000009506	HNRNPM	81	77.600	Pongo_abelii
ENSLBEG00000004545	hnrnpm	95	50.943	ENSPCAG00000009678	HNRNPM	82	64.706	Procavia_capensis
ENSLBEG00000004545	hnrnpm	86	65.517	ENSPCOG00000020227	HNRNPM	82	74.576	Propithecus_coquereli
ENSLBEG00000004545	hnrnpm	95	47.598	ENSPVAG00000009647	HNRNPM	75	65.359	Pteropus_vampyrus
ENSLBEG00000004545	hnrnpm	96	77.762	ENSPNYG00000006542	hnrnpm	100	80.918	Pundamilia_nyererei
ENSLBEG00000004545	hnrnpm	87	65.323	ENSRNOG00000007921	Hnrnpm	82	77.600	Rattus_norvegicus
ENSLBEG00000004545	hnrnpm	86	68.966	ENSRBIG00000039870	-	81	77.600	Rhinopithecus_bieti
ENSLBEG00000004545	hnrnpm	83	69.444	ENSRBIG00000041503	HNRNPM	88	69.444	Rhinopithecus_bieti
ENSLBEG00000004545	hnrnpm	86	68.966	ENSRROG00000038240	-	81	77.600	Rhinopithecus_roxellana
ENSLBEG00000004545	hnrnpm	86	68.966	ENSRROG00000033189	-	82	77.600	Rhinopithecus_roxellana
ENSLBEG00000004545	hnrnpm	86	65.517	ENSSBOG00000032416	HNRNPM	81	77.600	Saimiri_boliviensis_boliviensis
ENSLBEG00000004545	hnrnpm	83	69.444	ENSSHAG00000005864	HNRNPM	88	77.600	Sarcophilus_harrisii
ENSLBEG00000004545	hnrnpm	96	73.110	ENSSFOG00015008815	hnrnpm	98	67.318	Scleropages_formosus
ENSLBEG00000004545	hnrnpm	100	80.583	ENSSMAG00000003992	hnrnpm	100	76.731	Scophthalmus_maximus
ENSLBEG00000004545	hnrnpm	100	88.936	ENSSDUG00000002188	hnrnpm	99	91.393	Seriola_dumerili
ENSLBEG00000004545	hnrnpm	100	80.224	ENSSLDG00000016713	hnrnpm	100	79.663	Seriola_lalandi_dorsalis
ENSLBEG00000004545	hnrnpm	81	80.282	ENSSARG00000000267	HNRNPM	66	80.282	Sorex_araneus
ENSLBEG00000004545	hnrnpm	94	51.006	ENSSPUG00000002270	HNRNPM	93	65.018	Sphenodon_punctatus
ENSLBEG00000004545	hnrnpm	100	81.564	ENSSPAG00000023132	hnrnpm	99	84.302	Stegastes_partitus
ENSLBEG00000004545	hnrnpm	86	69.828	ENSSSCG00000013602	HNRNPM	79	77.600	Sus_scrofa
ENSLBEG00000004545	hnrnpm	86	46.912	ENSTGUG00000000938	HNRNPM	79	65.447	Taeniopygia_guttata
ENSLBEG00000004545	hnrnpm	96	71.104	ENSTRUG00000013783	hnrnpm	89	80.000	Takifugu_rubripes
ENSLBEG00000004545	hnrnpm	96	76.676	ENSTNIG00000015530	hnrnpm	100	85.305	Tetraodon_nigroviridis
ENSLBEG00000004545	hnrnpm	71	63.467	ENSTBEG00000008718	HNRNPM	67	65.359	Tupaia_belangeri
ENSLBEG00000004545	hnrnpm	95	47.684	ENSTTRG00000009769	HNRNPM	79	64.539	Tursiops_truncatus
ENSLBEG00000004545	hnrnpm	83	69.231	ENSUAMG00000005710	HNRNPM	80	77.600	Ursus_americanus
ENSLBEG00000004545	hnrnpm	72	49.223	ENSUMAG00000014575	HNRNPM	84	76.923	Ursus_maritimus
ENSLBEG00000004545	hnrnpm	94	42.042	ENSVPAG00000004215	HNRNPM	89	50.980	Vicugna_pacos
ENSLBEG00000004545	hnrnpm	83	69.231	ENSVVUG00000024984	HNRNPM	80	77.600	Vulpes_vulpes
ENSLBEG00000004545	hnrnpm	95	51.857	ENSXETG00000001777	hnrnpm	53	47.541	Xenopus_tropicalis
ENSLBEG00000004545	hnrnpm	96	73.324	ENSXCOG00000002651	hnrnpm	98	66.620	Xiphophorus_couchianus
ENSLBEG00000004545	hnrnpm	92	74.887	ENSXMAG00000018502	hnrnpm	99	67.728	Xiphophorus_maculatus