EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000004565 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: tudor domain-containing protein 6-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 5115 bases
Position: chrFKLU01000020.1:1026709-1031823
Accession: 109978206
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000005928	TUDOR	PF00567.24	9.6e-157	1	7
ENSLBEP00000005928	TUDOR	PF00567.24	9.6e-157	2	7
ENSLBEP00000005928	TUDOR	PF00567.24	9.6e-157	3	7
ENSLBEP00000005928	TUDOR	PF00567.24	9.6e-157	4	7
ENSLBEP00000005928	TUDOR	PF00567.24	9.6e-157	5	7
ENSLBEP00000005928	TUDOR	PF00567.24	9.6e-157	6	7
ENSLBEP00000005928	TUDOR	PF00567.24	9.6e-157	7	7

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000006229	-	5115	XM_020627679	ENSLBEP00000005928	1704 (aa)	XP_020483335	-

Gene Model

Click here to download ENSLBEG00000004565's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000004565's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000004565	-	99	45.060	ENSLBEG00000022955	tdrd6	85	45.060
ENSLBEG00000004565	-	68	31.304	ENSLBEG00000004161	tdrd1	69	31.304

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000004565	-	99	58.768	ENSAPOG00000020893	-	99	58.768	Acanthochromis_polyacanthus
ENSLBEG00000004565	-	99	31.688	ENSAPOG00000023805	tdrd6	87	31.688	Acanthochromis_polyacanthus
ENSLBEG00000004565	-	95	30.832	ENSAMEG00000001687	TDRD6	82	30.832	Ailuropoda_melanoleuca
ENSLBEG00000004565	-	100	59.112	ENSACIG00000009194	-	100	59.112	Amphilophus_citrinellus
ENSLBEG00000004565	-	92	45.902	ENSACIG00000012633	-	94	45.902	Amphilophus_citrinellus
ENSLBEG00000004565	-	99	42.105	ENSAOCG00000013365	tdrd6	74	42.105	Amphiprion_ocellaris
ENSLBEG00000004565	-	99	59.346	ENSAOCG00000017073	-	99	59.346	Amphiprion_ocellaris
ENSLBEG00000004565	-	99	40.000	ENSAPEG00000015328	tdrd6	87	40.000	Amphiprion_percula
ENSLBEG00000004565	-	99	58.333	ENSAPEG00000011090	-	98	58.333	Amphiprion_percula
ENSLBEG00000004565	-	99	43.780	ENSATEG00000016586	tdrd6	78	43.780	Anabas_testudineus
ENSLBEG00000004565	-	99	66.146	ENSATEG00000001389	si:ch211-189e2.3	99	66.146	Anabas_testudineus
ENSLBEG00000004565	-	99	30.575	ENSACAG00000013170	TDRD6	99	31.264	Anolis_carolinensis
ENSLBEG00000004565	-	99	30.966	ENSANAG00000004725	TDRD6	82	30.966	Aotus_nancymaae
ENSLBEG00000004565	-	99	55.939	ENSACLG00000003092	-	100	55.939	Astatotilapia_calliptera
ENSLBEG00000004565	-	95	43.571	ENSACLG00000007717	-	83	43.571	Astatotilapia_calliptera
ENSLBEG00000004565	-	93	43.915	ENSAMXG00000010029	tdrd6	72	31.643	Astyanax_mexicanus
ENSLBEG00000004565	-	92	42.714	ENSAMXG00000032110	si:ch211-189e2.3	99	42.714	Astyanax_mexicanus
ENSLBEG00000004565	-	99	32.018	ENSBTAG00000009978	TDRD6	82	32.166	Bos_taurus
ENSLBEG00000004565	-	100	31.076	ENSCJAG00000012035	TDRD6	83	31.076	Callithrix_jacchus
ENSLBEG00000004565	-	99	30.078	ENSCAFG00000002036	TDRD6	84	31.106	Canis_familiaris
ENSLBEG00000004565	-	99	30.677	ENSCAFG00020012649	TDRD6	84	31.770	Canis_lupus_dingo
ENSLBEG00000004565	-	99	32.397	ENSCHIG00000012400	TDRD6	82	32.397	Capra_hircus
ENSLBEG00000004565	-	100	31.041	ENSCCAG00000027454	TDRD6	83	31.041	Cebus_capucinus
ENSLBEG00000004565	-	96	32.195	ENSCHOG00000000169	TDRD6	71	32.195	Choloepus_hoffmanni
ENSLBEG00000004565	-	86	42.857	ENSCPBG00000021664	TDRD6	60	42.857	Chrysemys_picta_bellii
ENSLBEG00000004565	-	99	31.238	ENSCANG00000030562	TDRD6	82	31.238	Colobus_angolensis_palliatus
ENSLBEG00000004565	-	99	56.512	ENSCSEG00000003495	-	99	56.512	Cynoglossus_semilaevis
ENSLBEG00000004565	-	99	31.388	ENSCSEG00000019023	tdrd6	83	31.388	Cynoglossus_semilaevis
ENSLBEG00000004565	-	57	50.526	ENSCVAG00000001528	-	95	50.526	Cyprinodon_variegatus
ENSLBEG00000004565	-	50	58.947	ENSCVAG00000018874	-	100	58.947	Cyprinodon_variegatus
ENSLBEG00000004565	-	100	37.500	ENSDARG00000089954	si:ch211-189e2.3	95	37.500	Danio_rerio
ENSLBEG00000004565	-	100	38.660	ENSDARG00000070052	tdrd6	88	38.660	Danio_rerio
ENSLBEG00000004565	-	99	32.584	ENSDORG00000023218	Tdrd6	81	32.584	Dipodomys_ordii
ENSLBEG00000004565	-	99	31.828	ENSETEG00000015260	TDRD6	84	31.828	Echinops_telfairi
ENSLBEG00000004565	-	99	31.798	ENSECAG00000024889	TDRD6	80	31.718	Equus_caballus
ENSLBEG00000004565	-	65	31.982	ENSEEUG00000010497	-	50	31.982	Erinaceus_europaeus
ENSLBEG00000004565	-	99	48.989	ENSELUG00000018873	-	99	48.989	Esox_lucius
ENSLBEG00000004565	-	99	49.522	ENSELUG00000010350	tdrd6	74	49.522	Esox_lucius
ENSLBEG00000004565	-	99	33.168	ENSFCAG00000023001	TDRD6	81	33.168	Felis_catus
ENSLBEG00000004565	-	94	30.995	ENSFALG00000001522	TDRD6	75	30.995	Ficedula_albicollis
ENSLBEG00000004565	-	99	42.105	ENSFHEG00000022915	tdrd6	75	42.105	Fundulus_heteroclitus
ENSLBEG00000004565	-	54	51.534	ENSGMOG00000012765	-	99	51.534	Gadus_morhua
ENSLBEG00000004565	-	94	44.819	ENSGMOG00000005132	tdrd6	93	44.819	Gadus_morhua
ENSLBEG00000004565	-	99	44.111	ENSGAFG00000009328	tdrd6	77	44.111	Gambusia_affinis
ENSLBEG00000004565	-	93	42.857	ENSGACG00000004820	tdrd6	99	42.857	Gasterosteus_aculeatus
ENSLBEG00000004565	-	98	32.737	ENSGAGG00000019966	TDRD6	84	32.737	Gopherus_agassizii
ENSLBEG00000004565	-	99	56.173	ENSHBUG00000000351	-	100	56.173	Haplochromis_burtoni
ENSLBEG00000004565	-	95	43.333	ENSHBUG00000012579	tdrd6	79	43.333	Haplochromis_burtoni
ENSLBEG00000004565	-	96	31.163	ENSHGLG00000019324	TDRD6	77	31.163	Heterocephalus_glaber_female
ENSLBEG00000004565	-	96	31.163	ENSHGLG00100006669	TDRD6	77	31.163	Heterocephalus_glaber_male
ENSLBEG00000004565	-	99	41.627	ENSHCOG00000019950	tdrd6	88	41.627	Hippocampus_comes
ENSLBEG00000004565	-	99	52.577	ENSHCOG00000017328	-	100	52.577	Hippocampus_comes
ENSLBEG00000004565	-	99	32.636	ENSIPUG00000023805	tdrd6	77	32.219	Ictalurus_punctatus
ENSLBEG00000004565	-	99	30.891	ENSSTOG00000028193	TDRD6	80	30.891	Ictidomys_tridecemlineatus
ENSLBEG00000004565	-	99	53.840	ENSKMAG00000015790	-	98	53.840	Kryptolebias_marmoratus
ENSLBEG00000004565	-	77	34.426	ENSKMAG00000003969	-	91	34.582	Kryptolebias_marmoratus
ENSLBEG00000004565	-	98	47.242	ENSLOCG00000016482	tdrd6	99	47.242	Lepisosteus_oculatus
ENSLBEG00000004565	-	99	31.841	ENSLAFG00000025617	TDRD6	81	31.841	Loxodonta_africana
ENSLBEG00000004565	-	99	57.722	ENSMAMG00000000227	-	100	57.722	Mastacembelus_armatus
ENSLBEG00000004565	-	94	44.498	ENSMAMG00000007725	tdrd6	82	44.498	Mastacembelus_armatus
ENSLBEG00000004565	-	95	43.571	ENSMZEG00005003573	tdrd6	78	43.571	Maylandia_zebra
ENSLBEG00000004565	-	99	56.056	ENSMZEG00005012754	-	100	56.056	Maylandia_zebra
ENSLBEG00000004565	-	88	34.211	ENSMGAG00000014281	-	72	34.211	Meleagris_gallopavo
ENSLBEG00000004565	-	96	31.754	ENSMICG00000030777	TDRD6	79	31.754	Microcebus_murinus
ENSLBEG00000004565	-	99	32.096	ENSMOCG00000005983	Tdrd6	81	31.798	Microtus_ochrogaster
ENSLBEG00000004565	-	99	44.048	ENSMMOG00000015651	tdrd6	85	44.048	Mola_mola
ENSLBEG00000004565	-	99	32.192	ENSMODG00000018889	TDRD6	77	31.111	Monodelphis_domestica
ENSLBEG00000004565	-	99	44.524	ENSMALG00000019679	tdrd6	78	44.524	Monopterus_albus
ENSLBEG00000004565	-	99	60.514	ENSMALG00000019184	-	99	60.514	Monopterus_albus
ENSLBEG00000004565	-	99	30.604	ENSMPUG00000012444	TDRD6	83	30.604	Mustela_putorius_furo
ENSLBEG00000004565	-	99	31.982	ENSNGAG00000024357	Tdrd6	82	31.982	Nannospalax_galili
ENSLBEG00000004565	-	92	43.333	ENSNBRG00000018258	tdrd6	88	43.333	Neolamprologus_brichardi
ENSLBEG00000004565	-	99	51.379	ENSNBRG00000007041	-	99	51.446	Neolamprologus_brichardi
ENSLBEG00000004565	-	99	33.181	ENSMEUG00000014304	TDRD6	76	31.515	Notamacropus_eugenii
ENSLBEG00000004565	-	99	43.810	ENSONIG00000001218	tdrd6	100	43.810	Oreochromis_niloticus
ENSLBEG00000004565	-	98	41.429	ENSORLG00000015951	amh	80	41.429	Oryzias_latipes
ENSLBEG00000004565	-	98	42.143	ENSORLG00020005897	amh	80	42.143	Oryzias_latipes_hni
ENSLBEG00000004565	-	99	41.905	ENSORLG00015001382	amh	78	41.905	Oryzias_latipes_hsok
ENSLBEG00000004565	-	99	41.089	ENSOMEG00000014481	tdrd6	79	41.089	Oryzias_melastigma
ENSLBEG00000004565	-	100	31.776	ENSOGAG00000000404	TDRD6	80	31.776	Otolemur_garnettii
ENSLBEG00000004565	-	97	32.194	ENSOARG00000010906	TDRD6	80	32.194	Ovis_aries
ENSLBEG00000004565	-	99	30.400	ENSPPRG00000007625	TDRD6	84	30.478	Panthera_pardus
ENSLBEG00000004565	-	97	31.224	ENSPTIG00000013853	TDRD6	79	31.224	Panthera_tigris_altaica
ENSLBEG00000004565	-	99	39.385	ENSPKIG00000012265	tdrd6	82	39.385	Paramormyrops_kingsleyae
ENSLBEG00000004565	-	97	31.304	ENSPSIG00000017275	-	66	31.304	Pelodiscus_sinensis
ENSLBEG00000004565	-	96	31.304	ENSPSIG00000000397	-	74	31.304	Pelodiscus_sinensis
ENSLBEG00000004565	-	98	41.148	ENSPMGG00000014626	tdrd6	99	41.148	Periophthalmus_magnuspinnatus
ENSLBEG00000004565	-	99	45.000	ENSPMGG00000000674	-	99	45.000	Periophthalmus_magnuspinnatus
ENSLBEG00000004565	-	99	30.785	ENSPCIG00000027676	TDRD6	82	30.785	Phascolarctos_cinereus
ENSLBEG00000004565	-	99	44.111	ENSPFOG00000012487	tdrd6	99	44.111	Poecilia_formosa
ENSLBEG00000004565	-	100	44.111	ENSPLAG00000020472	tdrd6	76	44.111	Poecilia_latipinna
ENSLBEG00000004565	-	99	44.111	ENSPMEG00000000075	tdrd6	76	44.111	Poecilia_mexicana
ENSLBEG00000004565	-	99	44.342	ENSPREG00000018829	tdrd6	76	44.342	Poecilia_reticulata
ENSLBEG00000004565	-	99	31.878	ENSPCOG00000011534	TDRD6	83	31.455	Propithecus_coquereli
ENSLBEG00000004565	-	99	30.556	ENSPVAG00000000587	TDRD6	83	30.556	Pteropus_vampyrus
ENSLBEG00000004565	-	92	43.333	ENSPNYG00000021847	tdrd6	86	43.333	Pundamilia_nyererei
ENSLBEG00000004565	-	99	56.132	ENSPNYG00000008466	-	99	56.132	Pundamilia_nyererei
ENSLBEG00000004565	-	99	33.256	ENSPNAG00000008860	tdrd6	86	33.256	Pygocentrus_nattereri
ENSLBEG00000004565	-	99	44.828	ENSPNAG00000000359	si:ch211-189e2.3	92	44.828	Pygocentrus_nattereri
ENSLBEG00000004565	-	99	32.096	ENSRNOG00000025693	Tdrd6	81	32.096	Rattus_norvegicus
ENSLBEG00000004565	-	99	31.349	ENSRBIG00000030252	TDRD6	82	31.349	Rhinopithecus_bieti
ENSLBEG00000004565	-	99	31.349	ENSRROG00000043964	TDRD6	82	31.349	Rhinopithecus_roxellana
ENSLBEG00000004565	-	100	30.452	ENSSBOG00000031889	TDRD6	83	30.452	Saimiri_boliviensis_boliviensis
ENSLBEG00000004565	-	99	30.196	ENSSHAG00000016901	TDRD6	83	30.196	Sarcophilus_harrisii
ENSLBEG00000004565	-	92	47.865	ENSSFOG00015014356	tdrd6	71	47.865	Scleropages_formosus
ENSLBEG00000004565	-	99	59.160	ENSSMAG00000014450	-	99	59.160	Scophthalmus_maximus
ENSLBEG00000004565	-	99	35.459	ENSSMAG00000004490	tdrd6	85	35.459	Scophthalmus_maximus
ENSLBEG00000004565	-	99	64.456	ENSSDUG00000007597	-	99	64.456	Seriola_dumerili
ENSLBEG00000004565	-	92	45.215	ENSSDUG00000006559	tdrd6	78	45.215	Seriola_dumerili
ENSLBEG00000004565	-	99	44.498	ENSSLDG00000004470	tdrd6	80	38.835	Seriola_lalandi_dorsalis
ENSLBEG00000004565	-	100	64.302	ENSSLDG00000002178	-	99	64.302	Seriola_lalandi_dorsalis
ENSLBEG00000004565	-	99	31.887	ENSSARG00000005817	TDRD6	84	31.887	Sorex_araneus
ENSLBEG00000004565	-	90	43.301	ENSSPAG00000013194	tdrd6	90	43.301	Stegastes_partitus
ENSLBEG00000004565	-	100	32.096	ENSSSCG00000021218	TDRD6	83	31.613	Sus_scrofa
ENSLBEG00000004565	-	99	30.769	ENSTGUG00000013234	TDRD6	100	31.469	Taeniopygia_guttata
ENSLBEG00000004565	-	76	38.627	ENSTRUG00000006534	-	94	38.627	Takifugu_rubripes
ENSLBEG00000004565	-	95	48.774	ENSTRUG00000023197	-	99	48.774	Takifugu_rubripes
ENSLBEG00000004565	-	80	48.533	ENSTNIG00000019317	-	88	48.533	Tetraodon_nigroviridis
ENSLBEG00000004565	-	99	30.709	ENSUAMG00000014941	TDRD6	83	30.709	Ursus_americanus
ENSLBEG00000004565	-	96	31.418	ENSUMAG00000005127	TDRD6	75	31.418	Ursus_maritimus
ENSLBEG00000004565	-	99	31.270	ENSVVUG00000029302	TDRD6	85	30.724	Vulpes_vulpes
ENSLBEG00000004565	-	94	33.516	ENSXETG00000016255	tdrd6	91	33.516	Xenopus_tropicalis
ENSLBEG00000004565	-	91	43.649	ENSXCOG00000008476	tdrd6	94	43.649	Xiphophorus_couchianus
ENSLBEG00000004565	-	99	43.649	ENSXMAG00000025787	tdrd6	78	43.649	Xiphophorus_maculatus