EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000004576 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 3799 bases
Position: chrFKLU01004614.1:10863-14661
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000005964	RVT_1	PF00078.27	1e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000006265	-	2445	-	ENSLBEP00000005964	814 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000004576's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000004576's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000004576	-	85	84.354	ENSLBEG00000003745	-	83	84.354
ENSLBEG00000004576	-	99	94.975	ENSLBEG00000006732	-	99	94.975

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000004576	-	91	38.847	ENSACIG00000010787	-	78	38.847	Amphilophus_citrinellus
ENSLBEG00000004576	-	87	45.127	ENSACIG00000009025	-	81	45.127	Amphilophus_citrinellus
ENSLBEG00000004576	-	82	43.182	ENSACIG00000012161	-	61	43.182	Amphilophus_citrinellus
ENSLBEG00000004576	-	89	43.426	ENSACIG00000013116	-	74	43.426	Amphilophus_citrinellus
ENSLBEG00000004576	-	82	47.100	ENSACIG00000007038	-	60	47.100	Amphilophus_citrinellus
ENSLBEG00000004576	-	79	40.831	ENSAMXG00000042811	-	59	39.773	Astyanax_mexicanus
ENSLBEG00000004576	-	80	40.465	ENSCPBG00000003842	-	53	40.132	Chrysemys_picta_bellii
ENSLBEG00000004576	-	87	39.278	ENSCVAG00000004138	-	69	39.278	Cyprinodon_variegatus
ENSLBEG00000004576	-	78	36.328	ENSELUG00000004618	-	56	36.328	Esox_lucius
ENSLBEG00000004576	-	81	42.410	ENSELUG00000004597	-	73	42.410	Esox_lucius
ENSLBEG00000004576	-	85	37.061	ENSFHEG00000002853	-	75	37.061	Fundulus_heteroclitus
ENSLBEG00000004576	-	86	43.038	ENSFHEG00000002865	-	61	43.038	Fundulus_heteroclitus
ENSLBEG00000004576	-	73	41.333	ENSFHEG00000007211	-	64	39.957	Fundulus_heteroclitus
ENSLBEG00000004576	-	87	41.797	ENSFHEG00000022106	-	68	41.797	Fundulus_heteroclitus
ENSLBEG00000004576	-	80	37.264	ENSHCOG00000007389	-	62	37.264	Hippocampus_comes
ENSLBEG00000004576	-	73	36.963	ENSHCOG00000007436	-	57	36.963	Hippocampus_comes
ENSLBEG00000004576	-	81	37.972	ENSHCOG00000000471	-	57	37.972	Hippocampus_comes
ENSLBEG00000004576	-	80	37.674	ENSHCOG00000007397	-	59	37.674	Hippocampus_comes
ENSLBEG00000004576	-	72	34.300	ENSLACG00000006357	-	77	34.300	Latimeria_chalumnae
ENSLBEG00000004576	-	77	39.506	ENSLOCG00000017064	-	58	39.506	Lepisosteus_oculatus
ENSLBEG00000004576	-	84	34.737	ENSLOCG00000011928	-	73	34.605	Lepisosteus_oculatus
ENSLBEG00000004576	-	86	46.771	ENSMAMG00000019985	-	62	46.405	Mastacembelus_armatus
ENSLBEG00000004576	-	89	43.789	ENSONIG00000020875	-	64	43.789	Oreochromis_niloticus
ENSLBEG00000004576	-	76	39.541	ENSOMEG00000015368	-	61	39.055	Oryzias_melastigma
ENSLBEG00000004576	-	62	35.774	ENSPMGG00000001593	-	63	35.774	Periophthalmus_magnuspinnatus
ENSLBEG00000004576	-	82	40.000	ENSPMGG00000017392	-	72	40.000	Periophthalmus_magnuspinnatus
ENSLBEG00000004576	-	84	40.898	ENSPLAG00000022994	-	67	40.898	Poecilia_latipinna
ENSLBEG00000004576	-	93	38.800	ENSPLAG00000011817	-	78	36.644	Poecilia_latipinna
ENSLBEG00000004576	-	86	39.485	ENSPLAG00000023379	-	88	39.485	Poecilia_latipinna
ENSLBEG00000004576	-	82	40.898	ENSPLAG00000011810	-	66	40.898	Poecilia_latipinna
ENSLBEG00000004576	-	97	37.049	ENSPMEG00000008574	-	79	37.049	Poecilia_mexicana
ENSLBEG00000004576	-	81	41.315	ENSPMEG00000003431	-	71	40.000	Poecilia_mexicana
ENSLBEG00000004576	-	78	42.928	ENSPREG00000005756	-	59	43.317	Poecilia_reticulata
ENSLBEG00000004576	-	90	39.195	ENSPREG00000012484	-	66	39.195	Poecilia_reticulata
ENSLBEG00000004576	-	86	40.650	ENSPREG00000005456	-	61	40.650	Poecilia_reticulata
ENSLBEG00000004576	-	78	41.089	ENSPNAG00000007038	-	57	40.227	Pygocentrus_nattereri
ENSLBEG00000004576	-	79	32.540	ENSPNAG00000014625	-	53	32.540	Pygocentrus_nattereri
ENSLBEG00000004576	-	88	39.729	ENSPNAG00000016635	-	63	39.729	Pygocentrus_nattereri
ENSLBEG00000004576	-	64	39.803	ENSPNAG00000017596	-	61	38.889	Pygocentrus_nattereri
ENSLBEG00000004576	-	88	40.173	ENSPNAG00000003539	-	63	40.173	Pygocentrus_nattereri
ENSLBEG00000004576	-	78	39.066	ENSPNAG00000021754	-	57	36.748	Pygocentrus_nattereri
ENSLBEG00000004576	-	81	40.996	ENSXCOG00000013093	-	59	40.996	Xiphophorus_couchianus
ENSLBEG00000004576	-	94	39.041	ENSXCOG00000008881	-	99	39.041	Xiphophorus_couchianus
ENSLBEG00000004576	-	86	36.721	ENSXMAG00000028672	-	75	36.721	Xiphophorus_maculatus