EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000004779 (Gene tree)
Gene ID: 109983778
Gene Symbol: plecb
Alias: si:ch211-24c14.1
Full Name: plectin-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 118096 bases
Position: chrFKLU01000004.1:1965798-2083893
Accession: 109983778
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000006292	S10_plectin	PF03501.15	1.2e-36	1	1
ENSLBEP00000006247	S10_plectin	PF03501.15	1.2e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000006609	-	17955	XM_020633662	ENSLBEP00000006292	5771 (aa)	XP_020489318	-
ENSLBET00000006526	-	14549	-	ENSLBEP00000006215	4535 (aa)	-	-
ENSLBET00000006563	-	17970	-	ENSLBEP00000006247	5776 (aa)	-	-
ENSLBET00000006687	-	13949	-	ENSLBEP00000006367	4544 (aa)	-	-
ENSLBET00000006643	-	14082	-	ENSLBEP00000006326	4493 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000004779's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000004779's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000004779	plecb	100	80.704	ENSATEG00000024559	plecb	100	79.800	Anabas_testudineus
ENSLBEG00000004779	plecb	99	80.746	ENSACLG00000022613	plecb	99	80.611	Astatotilapia_calliptera
ENSLBEG00000004779	plecb	95	83.814	ENSCVAG00000013972	plecb	94	83.602	Cyprinodon_variegatus
ENSLBEG00000004779	plecb	92	77.170	ENSELUG00000020803	plecb	97	76.537	Esox_lucius
ENSLBEG00000004779	plecb	80	80.926	ENSGMOG00000006545	plecb	99	80.993	Gadus_morhua
ENSLBEG00000004779	plecb	81	86.217	ENSGACG00000005431	plecb	99	86.415	Gasterosteus_aculeatus
ENSLBEG00000004779	plecb	82	74.102	ENSIPUG00000020055	plecb	86	72.084	Ictalurus_punctatus
ENSLBEG00000004779	plecb	80	86.275	ENSKMAG00000003609	plecb	99	86.254	Kryptolebias_marmoratus
ENSLBEG00000004779	plecb	100	78.991	ENSMAMG00000001487	plecb	100	79.073	Mastacembelus_armatus
ENSLBEG00000004779	plecb	80	71.801	ENSONIG00000013803	pleca	99	71.984	Oreochromis_niloticus
ENSLBEG00000004779	plecb	99	77.896	ENSORLG00000023311	plecb	99	76.372	Oryzias_latipes
ENSLBEG00000004779	plecb	96	77.943	ENSORLG00020001716	plecb	99	76.376	Oryzias_latipes_hni
ENSLBEG00000004779	plecb	96	77.649	ENSORLG00015017959	plecb	99	76.247	Oryzias_latipes_hsok
ENSLBEG00000004779	plecb	95	80.105	ENSOMEG00000011949	plecb	99	77.984	Oryzias_melastigma
ENSLBEG00000004779	plecb	81	72.163	ENSPKIG00000014989	pleca	89	72.342	Paramormyrops_kingsleyae
ENSLBEG00000004779	plecb	99	79.167	ENSPMEG00000014762	plecb	99	78.645	Poecilia_mexicana
ENSLBEG00000004779	plecb	99	79.207	ENSPREG00000014625	plecb	99	78.426	Poecilia_reticulata
ENSLBEG00000004779	plecb	100	80.561	ENSSMAG00000007821	plecb	100	80.606	Scophthalmus_maximus
ENSLBEG00000004779	plecb	99	79.766	ENSTRUG00000003715	plecb	99	79.829	Takifugu_rubripes