EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000004982 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: FA complementation group M
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 51583 bases
Position: chrFKLU01000184.1:488155-539737
Accession: 109990551
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000006514	ResIII	PF04851.15	2.8e-18	1	1
ENSLBEP00000006579	ResIII	PF04851.15	3.4e-18	1	1
ENSLBEP00000006514	DEAD	PF00270.29	1.5e-19	1	1
ENSLBEP00000006579	DEAD	PF00270.29	1.6e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000006846	-	4838	XM_020642714	ENSLBEP00000006514	1565 (aa)	XP_020498370	-
ENSLBET00000006913	-	5433	-	ENSLBEP00000006579	1810 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000004982's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000004982's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000004982	-	69	55.569	ENSG00000187790	FANCM	97	58.956	Homo_sapiens
ENSLBEG00000004982	-	76	50.457	ENSAMEG00000002114	FANCM	62	54.481	Ailuropoda_melanoleuca
ENSLBEG00000004982	-	97	70.672	ENSATEG00000012412	-	90	70.988	Anabas_testudineus
ENSLBEG00000004982	-	69	54.577	ENSANAG00000025075	FANCM	55	54.801	Aotus_nancymaae
ENSLBEG00000004982	-	99	63.403	ENSACLG00000016008	-	91	64.017	Astatotilapia_calliptera
ENSLBEG00000004982	-	98	46.144	ENSAMXG00000020275	-	83	49.495	Astyanax_mexicanus
ENSLBEG00000004982	-	65	58.495	ENSBTAG00000002612	FANCM	94	55.860	Bos_taurus
ENSLBEG00000004982	-	64	54.429	ENSCJAG00000015945	FANCM	56	54.831	Callithrix_jacchus
ENSLBEG00000004982	-	69	55.254	ENSCAFG00000014062	FANCM	55	55.542	Canis_familiaris
ENSLBEG00000004982	-	69	54.900	ENSCHIG00000015176	FANCM	62	55.018	Capra_hircus
ENSLBEG00000004982	-	98	39.749	ENSCPOG00000001446	FANCM	66	48.177	Cavia_porcellus
ENSLBEG00000004982	-	69	55.217	ENSCCAG00000026593	FANCM	57	54.567	Cebus_capucinus
ENSLBEG00000004982	-	69	54.684	ENSCATG00000031379	FANCM	56	54.631	Cercocebus_atys
ENSLBEG00000004982	-	69	54.684	ENSCSAG00000015308	FANCM	56	54.279	Chlorocebus_sabaeus
ENSLBEG00000004982	-	91	41.364	ENSCPBG00000015089	FANCM	72	54.608	Chrysemys_picta_bellii
ENSLBEG00000004982	-	72	55.285	ENSCANG00000029498	FANCM	56	54.631	Colobus_angolensis_palliatus
ENSLBEG00000004982	-	69	54.470	ENSCGRG00001023573	Fancm	62	54.470	Cricetulus_griseus_chok1gshd
ENSLBEG00000004982	-	98	57.731	ENSCSEG00000002313	-	85	62.893	Cynoglossus_semilaevis
ENSLBEG00000004982	-	89	61.752	ENSCVAG00000015579	-	89	62.473	Cyprinodon_variegatus
ENSLBEG00000004982	-	68	54.976	ENSDNOG00000007697	FANCM	62	54.599	Dasypus_novemcinctus
ENSLBEG00000004982	-	77	54.726	ENSDORG00000010095	Fancm	62	55.181	Dipodomys_ordii
ENSLBEG00000004982	-	58	55.726	ENSEASG00005007781	FANCM	97	59.348	Equus_asinus_asinus
ENSLBEG00000004982	-	92	53.961	ENSELUG00000015761	-	93	52.826	Esox_lucius
ENSLBEG00000004982	-	62	53.417	ENSFALG00000001703	FANCM	55	53.417	Ficedula_albicollis
ENSLBEG00000004982	-	69	54.162	ENSFDAG00000009043	FANCM	61	53.991	Fukomys_damarensis
ENSLBEG00000004982	-	90	64.151	ENSGMOG00000002019	-	83	64.159	Gadus_morhua
ENSLBEG00000004982	-	63	57.945	ENSGALG00000031182	FANCM	59	55.026	Gallus_gallus
ENSLBEG00000004982	-	97	59.109	ENSGACG00000009448	-	75	66.279	Gasterosteus_aculeatus
ENSLBEG00000004982	-	77	55.930	ENSGGOG00000008546	FANCM	62	55.516	Gorilla_gorilla
ENSLBEG00000004982	-	99	62.289	ENSHBUG00000007085	-	89	63.808	Haplochromis_burtoni
ENSLBEG00000004982	-	98	38.628	ENSHGLG00000013787	FANCM	61	54.930	Heterocephalus_glaber_female
ENSLBEG00000004982	-	98	38.688	ENSHGLG00100006377	FANCM	61	54.930	Heterocephalus_glaber_male
ENSLBEG00000004982	-	98	47.763	ENSIPUG00000014629	fancm	88	63.686	Ictalurus_punctatus
ENSLBEG00000004982	-	99	39.964	ENSLACG00000007739	FANCM	62	54.704	Latimeria_chalumnae
ENSLBEG00000004982	-	94	50.960	ENSLOCG00000011318	FANCM	86	48.491	Lepisosteus_oculatus
ENSLBEG00000004982	-	92	42.687	ENSLAFG00000001136	FANCM	62	54.782	Loxodonta_africana
ENSLBEG00000004982	-	69	54.631	ENSMFAG00000000383	FANCM	56	54.471	Macaca_fascicularis
ENSLBEG00000004982	-	69	54.631	ENSMMUG00000016513	FANCM	56	54.471	Macaca_mulatta
ENSLBEG00000004982	-	69	54.631	ENSMNEG00000038659	FANCM	56	54.396	Macaca_nemestrina
ENSLBEG00000004982	-	69	49.400	ENSMLEG00000035743	FANCM	53	49.279	Mandrillus_leucophaeus
ENSLBEG00000004982	-	97	63.800	ENSMAMG00000007087	-	90	65.041	Mastacembelus_armatus
ENSLBEG00000004982	-	99	63.464	ENSMZEG00005004644	-	91	63.808	Maylandia_zebra
ENSLBEG00000004982	-	69	50.594	ENSMAUG00000015450	Fancm	62	50.950	Mesocricetus_auratus
ENSLBEG00000004982	-	77	55.814	ENSMICG00000005811	FANCM	55	55.503	Microcebus_murinus
ENSLBEG00000004982	-	69	54.459	ENSMOCG00000008775	Fancm	63	54.816	Microtus_ochrogaster
ENSLBEG00000004982	-	91	68.103	ENSMMOG00000010215	-	94	68.271	Mola_mola
ENSLBEG00000004982	-	72	51.913	ENSMODG00000007334	FANCM	62	54.262	Monodelphis_domestica
ENSLBEG00000004982	-	79	47.048	MGP_CAROLIEiJ_G0017791	Fancm	72	47.429	Mus_caroli
ENSLBEG00000004982	-	79	47.254	ENSMUSG00000055884	Fancm	97	56.983	Mus_musculus
ENSLBEG00000004982	-	72	49.834	MGP_PahariEiJ_G0029547	Fancm	72	44.496	Mus_pahari
ENSLBEG00000004982	-	79	47.601	MGP_SPRETEiJ_G0018636	Fancm	72	47.695	Mus_spretus
ENSLBEG00000004982	-	69	55.307	ENSMPUG00000004849	FANCM	72	47.597	Mustela_putorius_furo
ENSLBEG00000004982	-	77	54.070	ENSMLUG00000006671	FANCM	56	53.310	Myotis_lucifugus
ENSLBEG00000004982	-	98	38.471	ENSNGAG00000017199	Fancm	56	53.673	Nannospalax_galili
ENSLBEG00000004982	-	69	55.334	ENSNLEG00000004432	FANCM	62	55.100	Nomascus_leucogenys
ENSLBEG00000004982	-	59	53.061	ENSMEUG00000004977	-	55	53.061	Notamacropus_eugenii
ENSLBEG00000004982	-	89	75.489	ENSONIG00000003531	-	91	65.481	Oreochromis_niloticus
ENSLBEG00000004982	-	62	58.087	ENSOANG00000013997	FANCM	53	58.106	Ornithorhynchus_anatinus
ENSLBEG00000004982	-	69	56.789	ENSOCUG00000007539	FANCM	63	56.671	Oryctolagus_cuniculus
ENSLBEG00000004982	-	95	62.834	ENSORLG00000014503	-	90	62.603	Oryzias_latipes
ENSLBEG00000004982	-	95	62.757	ENSORLG00020013516	-	91	63.674	Oryzias_latipes_hni
ENSLBEG00000004982	-	95	63.169	ENSORLG00015012100	-	89	62.733	Oryzias_latipes_hsok
ENSLBEG00000004982	-	95	62.448	ENSOMEG00000010717	-	88	63.158	Oryzias_melastigma
ENSLBEG00000004982	-	79	48.402	ENSOGAG00000003015	FANCM	56	48.590	Otolemur_garnettii
ENSLBEG00000004982	-	69	54.900	ENSOARG00000009429	FANCM	62	55.018	Ovis_aries
ENSLBEG00000004982	-	69	55.920	ENSPPAG00000028944	FANCM	62	55.686	Pan_paniscus
ENSLBEG00000004982	-	69	55.569	ENSPTRG00000006307	FANCM	62	55.334	Pan_troglodytes
ENSLBEG00000004982	-	69	54.684	ENSPANG00000023200	FANCM	56	54.396	Papio_anubis
ENSLBEG00000004982	-	69	53.529	ENSPEMG00000005619	Fancm	62	53.555	Peromyscus_maniculatus_bairdii
ENSLBEG00000004982	-	80	76.975	ENSPFOG00000002008	-	73	77.872	Poecilia_formosa
ENSLBEG00000004982	-	96	60.560	ENSPLAG00000014164	-	90	61.688	Poecilia_latipinna
ENSLBEG00000004982	-	99	58.530	ENSPMEG00000010746	-	89	61.638	Poecilia_mexicana
ENSLBEG00000004982	-	98	58.532	ENSPREG00000019849	-	88	62.690	Poecilia_reticulata
ENSLBEG00000004982	-	69	55.334	ENSPPYG00000005781	FANCM	65	55.100	Pongo_abelii
ENSLBEG00000004982	-	64	51.940	ENSPCAG00000011363	-	56	51.940	Procavia_capensis
ENSLBEG00000004982	-	70	54.864	ENSPCOG00000014388	FANCM	60	54.125	Propithecus_coquereli
ENSLBEG00000004982	-	63	55.824	ENSPVAG00000015802	FANCM	57	55.824	Pteropus_vampyrus
ENSLBEG00000004982	-	98	43.001	ENSPNAG00000013558	-	76	49.857	Pygocentrus_nattereri
ENSLBEG00000004982	-	92	39.881	ENSRNOG00000056721	Fancm	76	52.189	Rattus_norvegicus
ENSLBEG00000004982	-	77	55.285	ENSRBIG00000011451	FANCM	58	54.884	Rhinopithecus_bieti
ENSLBEG00000004982	-	77	55.297	ENSRROG00000028917	FANCM	58	54.895	Rhinopithecus_roxellana
ENSLBEG00000004982	-	64	55.136	ENSSBOG00000030882	FANCM	55	55.018	Saimiri_boliviensis_boliviensis
ENSLBEG00000004982	-	68	56.499	ENSSHAG00000000507	FANCM	54	54.023	Sarcophilus_harrisii
ENSLBEG00000004982	-	98	64.470	ENSSMAG00000019903	-	100	80.000	Scophthalmus_maximus
ENSLBEG00000004982	-	93	67.032	ENSSDUG00000016682	-	91	88.601	Seriola_dumerili
ENSLBEG00000004982	-	99	66.809	ENSSLDG00000003408	-	87	68.163	Seriola_lalandi_dorsalis
ENSLBEG00000004982	-	72	49.388	ENSSSCG00000005000	FANCM	64	49.642	Sus_scrofa
ENSLBEG00000004982	-	97	58.586	ENSTNIG00000017277	-	89	58.990	Tetraodon_nigroviridis
ENSLBEG00000004982	-	79	46.765	ENSTTRG00000006669	FANCM	66	47.418	Tursiops_truncatus
ENSLBEG00000004982	-	64	58.209	ENSVPAG00000005763	FANCM	56	58.209	Vicugna_pacos
ENSLBEG00000004982	-	69	54.900	ENSVVUG00000000357	FANCM	55	54.748	Vulpes_vulpes
ENSLBEG00000004982	-	96	61.064	ENSXMAG00000007702	-	89	63.537	Xiphophorus_maculatus