EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSLBEG00000005001 (Gene tree)
Gene ID
109992959
Gene Symbol
-
Alias
-
Full Name
splicing factor U2AF 65 kDa subunit-like
Gene Type
protein_coding
Species
Labrus_bergylta
Status
putative
Strand
Minus strand
Length
5000 bases
Position
chrFKLU01000244.1:588508-593507
Accession
109992959
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSLBEP00000006500RRM_1PF00076.224.1e-2913
ENSLBEP00000006500RRM_1PF00076.224.1e-2923
ENSLBEP00000006500RRM_1PF00076.224.1e-2933
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSLBET00000006832-1395XM_020645748ENSLBEP00000006500464 (aa)XP_020501404-
Gene Model
Click here to download ENSLBEG00000005001's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000005001's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSLBEG00000005001-9076.303ENSLBEG00000016162u2af2a9772.198
ENSLBEG00000005001-7537.255ENSLBEG00000012505puf60b6437.255
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSLBEG00000005001-8977.482ENSG00000063244U2AF29980.000Homo_sapiens
ENSLBEG00000005001-6775.227ENSAPOG00000023155u2af2a9975.227Acanthochromis_polyacanthus
ENSLBEG00000005001-9995.425ENSAPOG00000002208-9795.425Acanthochromis_polyacanthus
ENSLBEG00000005001-8076.280ENSAMEG00000003864U2AF210071.734Ailuropoda_melanoleuca
ENSLBEG00000005001-8379.692ENSACIG00000005749u2af2a9970.996Amphilophus_citrinellus
ENSLBEG00000005001-9995.000ENSACIG00000014173-9995.000Amphilophus_citrinellus
ENSLBEG00000005001-9995.425ENSAOCG00000003595-9795.425Amphiprion_ocellaris
ENSLBEG00000005001-8678.908ENSAOCG00000015571u2af2a9772.629Amphiprion_ocellaris
ENSLBEG00000005001-9993.696ENSAPEG00000020062-9793.696Amphiprion_percula
ENSLBEG00000005001-8379.949ENSAPEG00000009376u2af2a9378.519Amphiprion_percula
ENSLBEG00000005001-9995.207ENSATEG00000020577-9995.207Anabas_testudineus
ENSLBEG00000005001-9076.540ENSATEG00000022332u2af2a9772.198Anabas_testudineus
ENSLBEG00000005001-8678.571ENSACAG00000015489U2AF29673.333Anolis_carolinensis
ENSLBEG00000005001-8977.483ENSANAG00000028042U2AF29671.875Aotus_nancymaae
ENSLBEG00000005001-8678.660ENSACLG00000022181u2af2a9970.996Astatotilapia_calliptera
ENSLBEG00000005001-9995.207ENSACLG00000020793-9795.207Astatotilapia_calliptera
ENSLBEG00000005001-8377.638ENSAMXG00000033347u2af2a9770.253Astyanax_mexicanus
ENSLBEG00000005001-8678.164ENSAMXG00000039454u2af2b9671.368Astyanax_mexicanus
ENSLBEG00000005001-8977.218ENSBTAG00000002830U2AF29674.026Bos_taurus
ENSLBEG00000005001-8655.528WBGene00006697uaf-110054.110Caenorhabditis_elegans
ENSLBEG00000005001-8976.978ENSCJAG00000017128U2AF29773.605Callithrix_jacchus
ENSLBEG00000005001-8977.482ENSCAFG00000002551U2AF29673.218Canis_familiaris
ENSLBEG00000005001-8678.624ENSCAFG00020015445U2AF29871.849Canis_lupus_dingo
ENSLBEG00000005001-8666.098ENSCHIG00000023595U2AF28766.098Capra_hircus
ENSLBEG00000005001-8976.978ENSTSYG00000007432U2AF29972.128Carlito_syrichta
ENSLBEG00000005001-8977.218ENSCAPG00000008466U2AF29972.961Cavia_aperea
ENSLBEG00000005001-8977.218ENSCPOG00000001582U2AF29673.019Cavia_porcellus
ENSLBEG00000005001-8976.978ENSCCAG00000023336U2AF29672.805Cebus_capucinus
ENSLBEG00000005001-8977.482ENSCATG00000004637U2AF29673.218Cercocebus_atys
ENSLBEG00000005001-8977.482ENSCLAG00000000596U2AF29673.218Chinchilla_lanigera
ENSLBEG00000005001-8977.482ENSCSAG00000001722U2AF29673.218Chlorocebus_sabaeus
ENSLBEG00000005001-8976.415ENSCPBG00000004485U2AF29980.000Chrysemys_picta_bellii
ENSLBEG00000005001-8568.766ENSCING00000003455-8963.326Ciona_intestinalis
ENSLBEG00000005001-8667.168ENSCSAVG00000006813-9660.377Ciona_savignyi
ENSLBEG00000005001-8077.089ENSCANG00000031002-9372.447Colobus_angolensis_palliatus
ENSLBEG00000005001-8871.671ENSCANG00000043845-9668.602Colobus_angolensis_palliatus
ENSLBEG00000005001-8976.978ENSCGRG00001003185-9674.026Cricetulus_griseus_chok1gshd
ENSLBEG00000005001-8973.608ENSCGRG00001007486-9569.737Cricetulus_griseus_chok1gshd
ENSLBEG00000005001-8973.608ENSCGRG00000018587-9569.737Cricetulus_griseus_crigri
ENSLBEG00000005001-5376.000ENSCGRG00000004524-8273.664Cricetulus_griseus_crigri
ENSLBEG00000005001-6473.718ENSCSEG00000018709u2af2a9573.718Cynoglossus_semilaevis
ENSLBEG00000005001-9988.017ENSCSEG00000020504-9188.235Cynoglossus_semilaevis
ENSLBEG00000005001-9893.598ENSCVAG00000023307-9793.682Cyprinodon_variegatus
ENSLBEG00000005001-8778.571ENSCVAG00000001259u2af2a9772.845Cyprinodon_variegatus
ENSLBEG00000005001-8378.718ENSDARG00000012505u2af2a9770.513Danio_rerio
ENSLBEG00000005001-9176.471ENSDARG00000011740u2af2b9572.318Danio_rerio
ENSLBEG00000005001-8077.089ENSDNOG00000047039U2AF29272.447Dasypus_novemcinctus
ENSLBEG00000005001-8976.978ENSDORG00000003250U2af29672.805Dipodomys_ordii
ENSLBEG00000005001-8951.034FBgn0034834LS28752.913Drosophila_melanogaster
ENSLBEG00000005001-8570.529FBgn0005411U2af5010070.557Drosophila_melanogaster
ENSLBEG00000005001-9170.188ENSEBUG00000010917U2AF29667.097Eptatretus_burgeri
ENSLBEG00000005001-8961.483ENSEBUG00000001732U2AF29658.099Eptatretus_burgeri
ENSLBEG00000005001-8678.765ENSEASG00005020708U2AF29073.176Equus_asinus_asinus
ENSLBEG00000005001-8579.545ENSECAG00000010110U2AF29674.026Equus_caballus
ENSLBEG00000005001-9073.770ENSELUG00000022291u2af2b9771.242Esox_lucius
ENSLBEG00000005001-9074.942ENSELUG00000015850u2af2a9771.822Esox_lucius
ENSLBEG00000005001-9989.325ENSELUG00000018459-9789.325Esox_lucius
ENSLBEG00000005001-8976.978ENSFCAG00000011504U2AF29672.805Felis_catus
ENSLBEG00000005001-8977.218ENSFDAG00000011264U2AF29672.961Fukomys_damarensis
ENSLBEG00000005001-8876.794ENSFHEG00000016025u2af2a9772.414Fundulus_heteroclitus
ENSLBEG00000005001-8379.744ENSGMOG00000004535u2af2a9772.222Gadus_morhua
ENSLBEG00000005001-8578.734ENSGALG00000052748U2AF26373.789Gallus_gallus
ENSLBEG00000005001-8778.571ENSGAFG00000013626u2af2a8572.845Gambusia_affinis
ENSLBEG00000005001-9989.978ENSGAFG00000005628-9789.325Gambusia_affinis
ENSLBEG00000005001-8379.949ENSGACG00000010632U2AF29772.043Gasterosteus_aculeatus
ENSLBEG00000005001-9885.563ENSGACG00000014500-9785.345Gasterosteus_aculeatus
ENSLBEG00000005001-6780.000ENSGAGG00000011849U2AF29980.000Gopherus_agassizii
ENSLBEG00000005001-5770.189ENSGGOG00000036399-9670.189Gorilla_gorilla
ENSLBEG00000005001-8678.660ENSHBUG00000013935u2af2a9970.996Haplochromis_burtoni
ENSLBEG00000005001-9995.207ENSHBUG00000017424-9795.207Haplochromis_burtoni
ENSLBEG00000005001-8976.978ENSHGLG00000005889U2AF29672.805Heterocephalus_glaber_female
ENSLBEG00000005001-8976.978ENSHGLG00100004757U2AF29972.747Heterocephalus_glaber_male
ENSLBEG00000005001-9074.592ENSHCOG00000019367u2af2a9770.913Hippocampus_comes
ENSLBEG00000005001-9983.878ENSIPUG00000009844-9681.264Ictalurus_punctatus
ENSLBEG00000005001-8378.205ENSIPUG00000007717u2af2a9769.658Ictalurus_punctatus
ENSLBEG00000005001-8678.554ENSIPUG00000009077u2af29572.103Ictalurus_punctatus
ENSLBEG00000005001-8976.978ENSSTOG00000019595U2AF29672.805Ictidomys_tridecemlineatus
ENSLBEG00000005001-8976.978ENSJJAG00000017705U2af29672.805Jaculus_jaculus
ENSLBEG00000005001-9076.540ENSKMAG00000005960u2af2a9972.451Kryptolebias_marmoratus
ENSLBEG00000005001-8079.733ENSLACG00000001648U2AF29979.733Latimeria_chalumnae
ENSLBEG00000005001-9988.671ENSLOCG00000010843-9788.671Lepisosteus_oculatus
ENSLBEG00000005001-6180.000ENSLOCG00000008050u2af2b9371.182Lepisosteus_oculatus
ENSLBEG00000005001-9965.481ENSLAFG00000028496-9766.810Loxodonta_africana
ENSLBEG00000005001-8878.240ENSLAFG00000018056-9673.650Loxodonta_africana
ENSLBEG00000005001-8976.978ENSMFAG00000038383U2AF29672.805Macaca_fascicularis
ENSLBEG00000005001-8976.739ENSMMUG00000004810U2AF29672.591Macaca_mulatta
ENSLBEG00000005001-8977.482ENSMNEG00000042096U2AF29773.605Macaca_nemestrina
ENSLBEG00000005001-8977.482ENSMLEG00000032219U2AF28972.805Mandrillus_leucophaeus
ENSLBEG00000005001-9992.375ENSMAMG00000020158-9692.375Mastacembelus_armatus
ENSLBEG00000005001-8677.751ENSMAMG00000019817u2af2a9971.554Mastacembelus_armatus
ENSLBEG00000005001-8678.660ENSMZEG00005016563u2af2a9772.414Maylandia_zebra
ENSLBEG00000005001-9995.207ENSMZEG00005023318-9795.207Maylandia_zebra
ENSLBEG00000005001-8976.978ENSMAUG00000008180U2af29872.805Mesocricetus_auratus
ENSLBEG00000005001-8977.482ENSMICG00000027681U2AF29872.961Microcebus_murinus
ENSLBEG00000005001-6777.778ENSMOCG00000001018-9977.778Microtus_ochrogaster
ENSLBEG00000005001-8976.978ENSMOCG00000013214-9672.805Microtus_ochrogaster
ENSLBEG00000005001-9567.538ENSMOCG00000007227-8473.067Microtus_ochrogaster
ENSLBEG00000005001-8379.949ENSMMOG00000016600u2af2a9970.996Mola_mola
ENSLBEG00000005001-8588.442ENSMMOG00000000531-8788.177Mola_mola
ENSLBEG00000005001-9176.941ENSMALG00000009985u2af2a9773.060Monopterus_albus
ENSLBEG00000005001-8977.482MGP_CAROLIEiJ_G0029150U2af29673.218Mus_caroli
ENSLBEG00000005001-8977.482ENSMUSG00000030435U2af29980.000Mus_musculus
ENSLBEG00000005001-8977.482MGP_PahariEiJ_G0021017U2af29673.218Mus_pahari
ENSLBEG00000005001-8977.482MGP_SPRETEiJ_G0030203U2af29673.218Mus_spretus
ENSLBEG00000005001-8977.482ENSMPUG00000007135U2AF29673.218Mustela_putorius_furo
ENSLBEG00000005001-5274.699ENSMLUG00000011051-9974.699Myotis_lucifugus
ENSLBEG00000005001-8976.978ENSNGAG00000020369U2af29672.805Nannospalax_galili
ENSLBEG00000005001-8678.660ENSNBRG00000002568u2af2a9970.996Neolamprologus_brichardi
ENSLBEG00000005001-9995.861ENSNBRG00000011100-9995.861Neolamprologus_brichardi
ENSLBEG00000005001-8968.735ENSNLEG00000010562U2AF29980.000Nomascus_leucogenys
ENSLBEG00000005001-8966.586ENSMEUG00000002346U2AF29963.420Notamacropus_eugenii
ENSLBEG00000005001-9854.486ENSODEG00000009254-8362.667Octodon_degus
ENSLBEG00000005001-8971.223ENSODEG00000012729-9667.666Octodon_degus
ENSLBEG00000005001-9995.207ENSONIG00000009682-9795.207Oreochromis_niloticus
ENSLBEG00000005001-9374.943ENSONIG00000012793u2af2a9772.318Oreochromis_niloticus
ENSLBEG00000005001-9076.540ENSORLG00000011545u2af2a9772.609Oryzias_latipes
ENSLBEG00000005001-9076.540ENSORLG00020006941u2af2a9772.609Oryzias_latipes_hni
ENSLBEG00000005001-9076.540ENSORLG00015012843u2af2a9772.198Oryzias_latipes_hsok
ENSLBEG00000005001-9076.850ENSOMEG00000011386u2af2a9972.807Oryzias_melastigma
ENSLBEG00000005001-9248.602ENSOGAG00000034729-8153.030Otolemur_garnettii
ENSLBEG00000005001-8976.978ENSOGAG00000007206-9672.805Otolemur_garnettii
ENSLBEG00000005001-9367.615ENSOARG00000001091U2AF28572.993Ovis_aries
ENSLBEG00000005001-8976.978ENSPPAG00000039782U2AF29672.805Pan_paniscus
ENSLBEG00000005001-8976.978ENSPPRG00000013843U2AF29672.805Panthera_pardus
ENSLBEG00000005001-9967.880ENSPTIG00000005489U2AF28773.544Panthera_tigris_altaica
ENSLBEG00000005001-8976.978ENSPTRG00000011523U2AF29980.000Pan_troglodytes
ENSLBEG00000005001-8977.482ENSPANG00000008459U2AF29673.218Papio_anubis
ENSLBEG00000005001-9987.364ENSPKIG00000014878-9787.364Paramormyrops_kingsleyae
ENSLBEG00000005001-8976.442ENSPKIG00000024346u2af2b9770.779Paramormyrops_kingsleyae
ENSLBEG00000005001-8658.373ENSPSIG00000008014U2AF29955.649Pelodiscus_sinensis
ENSLBEG00000005001-8374.745ENSPMGG00000022980u2af2a9968.103Periophthalmus_magnuspinnatus
ENSLBEG00000005001-8976.978ENSPEMG00000007378U2af29980.000Peromyscus_maniculatus_bairdii
ENSLBEG00000005001-8375.827ENSPMAG00000004097u2af2a10071.002Petromyzon_marinus
ENSLBEG00000005001-8977.218ENSPCIG00000018013U2AF29673.019Phascolarctos_cinereus
ENSLBEG00000005001-9690.359ENSPFOG00000006433-9789.978Poecilia_formosa
ENSLBEG00000005001-8778.571ENSPFOG00000010799u2af2a9772.845Poecilia_formosa
ENSLBEG00000005001-8778.571ENSPLAG00000014365u2af2a9772.845Poecilia_latipinna
ENSLBEG00000005001-9690.359ENSPLAG00000003275-9989.417Poecilia_latipinna
ENSLBEG00000005001-8778.571ENSPMEG00000002969u2af2a9772.845Poecilia_mexicana
ENSLBEG00000005001-9689.910ENSPMEG00000003734-9988.985Poecilia_mexicana
ENSLBEG00000005001-8778.571ENSPREG00000008739u2af2a9972.451Poecilia_reticulata
ENSLBEG00000005001-9692.825ENSPREG00000013036-10095.205Poecilia_reticulata
ENSLBEG00000005001-6078.445ENSPPYG00000010429-7778.445Pongo_abelii
ENSLBEG00000005001-8961.244ENSPCAG00000014399-9658.761Procavia_capensis
ENSLBEG00000005001-8670.324ENSPCAG00000003709-9670.324Procavia_capensis
ENSLBEG00000005001-8976.978ENSPCOG00000025870U2AF29972.304Propithecus_coquereli
ENSLBEG00000005001-8976.739ENSPVAG00000004540U2AF29672.591Pteropus_vampyrus
ENSLBEG00000005001-9995.207ENSPNYG00000011605-9795.207Pundamilia_nyererei
ENSLBEG00000005001-8678.660ENSPNYG00000001438u2af2a9970.996Pundamilia_nyererei
ENSLBEG00000005001-8679.353ENSPNAG00000027289u2af2b9672.532Pygocentrus_nattereri
ENSLBEG00000005001-8379.744ENSPNAG00000017620u2af2a9371.274Pygocentrus_nattereri
ENSLBEG00000005001-9990.632ENSPNAG00000007182-9790.632Pygocentrus_nattereri
ENSLBEG00000005001-8977.482ENSRNOG00000015914U2af29673.218Rattus_norvegicus
ENSLBEG00000005001-8976.739ENSRBIG00000041018U2AF29672.591Rhinopithecus_bieti
ENSLBEG00000005001-8972.155ENSRROG00000031238-9668.683Rhinopithecus_roxellana
ENSLBEG00000005001-7976.738ENSRROG00000031103-10072.104Rhinopithecus_roxellana
ENSLBEG00000005001-8977.482ENSSBOG00000023891U2AF29673.218Saimiri_boliviensis_boliviensis
ENSLBEG00000005001-5368.151ENSSHAG00000001167U2AF28656.955Sarcophilus_harrisii
ENSLBEG00000005001-8778.519ENSSFOG00015019182u2af2b8978.519Scleropages_formosus
ENSLBEG00000005001-9988.017ENSSFOG00015003884-9788.017Scleropages_formosus
ENSLBEG00000005001-9373.469ENSSMAG00000012582u2af2a9771.983Scophthalmus_maximus
ENSLBEG00000005001-9893.819ENSSMAG00000013779-9793.900Scophthalmus_maximus
ENSLBEG00000005001-9995.445ENSSDUG00000021434-9495.445Seriola_dumerili
ENSLBEG00000005001-8678.660ENSSDUG00000009457u2af2a9772.414Seriola_dumerili
ENSLBEG00000005001-9995.445ENSSLDG00000016151-9995.445Seriola_lalandi_dorsalis
ENSLBEG00000005001-8678.660ENSSLDG00000022742u2af2a9772.414Seriola_lalandi_dorsalis
ENSLBEG00000005001-8677.372ENSSPUG00000010229U2AF29672.340Sphenodon_punctatus
ENSLBEG00000005001-8678.908ENSSPAG00000022519u2af2a9772.629Stegastes_partitus
ENSLBEG00000005001-9995.643ENSSPAG00000005241-9795.643Stegastes_partitus
ENSLBEG00000005001-8977.482ENSSSCG00000034815U2AF29674.026Sus_scrofa
ENSLBEG00000005001-8378.149ENSTRUG00000005514u2af2a9970.878Takifugu_rubripes
ENSLBEG00000005001-9076.722ENSTNIG00000008106U2AF29773.922Tetraodon_nigroviridis
ENSLBEG00000005001-8788.916ENSTNIG00000011257-9785.683Tetraodon_nigroviridis
ENSLBEG00000005001-7973.925ENSTBEG00000009104U2AF29774.863Tupaia_belangeri
ENSLBEG00000005001-8976.978ENSTTRG00000000987U2AF29672.805Tursiops_truncatus
ENSLBEG00000005001-8678.765ENSUAMG00000019883U2AF29972.668Ursus_americanus
ENSLBEG00000005001-8678.765ENSUMAG00000024586U2AF29980.000Ursus_maritimus
ENSLBEG00000005001-8977.482ENSVVUG00000006956U2AF26772.650Vulpes_vulpes
ENSLBEG00000005001-8580.051ENSXETG00000019128u2af29674.242Xenopus_tropicalis
ENSLBEG00000005001-8379.949ENSXCOG00000019406u2af2a9972.807Xiphophorus_couchianus
ENSLBEG00000005001-8778.571ENSXMAG00000011979u2af2a9772.845Xiphophorus_maculatus
ENSLBEG00000005001-9791.982ENSXMAG00000000768-9291.939Xiphophorus_maculatus

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