EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000005220 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 7396 bases
Position: chrFKLU01010742.1:218-7613
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000006864	EST1_DNA_bind	PF10373.9	3.5e-46	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000007206	-	2088	-	ENSLBEP00000006864	695 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000005220's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000005220's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000005220	-	75	83.920	ENSLBEG00000002983	smg7	53	83.920

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000005220	-	75	64.273	ENSG00000116698	SMG7	73	64.273	Homo_sapiens
ENSLBEG00000005220	-	76	79.305	ENSAPOG00000009611	smg7	56	79.270	Acanthochromis_polyacanthus
ENSLBEG00000005220	-	75	63.000	ENSAMEG00000002357	SMG7	52	63.000	Ailuropoda_melanoleuca
ENSLBEG00000005220	-	75	78.297	ENSACIG00000015152	smg7	56	78.297	Amphilophus_citrinellus
ENSLBEG00000005220	-	75	80.067	ENSAOCG00000013538	smg7	52	80.067	Amphiprion_ocellaris
ENSLBEG00000005220	-	75	79.732	ENSAPEG00000007851	smg7	52	79.732	Amphiprion_percula
ENSLBEG00000005220	-	75	79.698	ENSATEG00000006931	smg7	52	79.698	Anabas_testudineus
ENSLBEG00000005220	-	75	61.526	ENSAPLG00000015811	SMG7	52	61.526	Anas_platyrhynchos
ENSLBEG00000005220	-	75	61.296	ENSACAG00000014989	SMG7	50	61.296	Anolis_carolinensis
ENSLBEG00000005220	-	75	64.273	ENSANAG00000028114	SMG7	52	62.667	Aotus_nancymaae
ENSLBEG00000005220	-	75	78.727	ENSACLG00000022079	smg7	52	78.727	Astatotilapia_calliptera
ENSLBEG00000005220	-	75	71.477	ENSAMXG00000020809	smg7	52	71.477	Astyanax_mexicanus
ENSLBEG00000005220	-	75	64.098	ENSBTAG00000008003	SMG7	52	62.167	Bos_taurus
ENSLBEG00000005220	-	75	64.098	ENSCJAG00000005135	SMG7	52	62.500	Callithrix_jacchus
ENSLBEG00000005220	-	75	64.098	ENSCAFG00020015475	SMG7	52	62.500	Canis_lupus_dingo
ENSLBEG00000005220	-	75	64.098	ENSTSYG00000002667	SMG7	52	62.500	Carlito_syrichta
ENSLBEG00000005220	-	75	62.833	ENSCCAG00000028596	SMG7	52	62.833	Cebus_capucinus
ENSLBEG00000005220	-	75	64.623	ENSCATG00000011063	SMG7	52	63.000	Cercocebus_atys
ENSLBEG00000005220	-	75	64.448	ENSCLAG00000010751	SMG7	52	62.500	Chinchilla_lanigera
ENSLBEG00000005220	-	75	62.126	ENSCPBG00000015724	SMG7	52	62.292	Chrysemys_picta_bellii
ENSLBEG00000005220	-	75	63.000	ENSCANG00000015680	SMG7	52	63.000	Colobus_angolensis_palliatus
ENSLBEG00000005220	-	75	63.398	ENSCGRG00001013705	Smg7	52	61.706	Cricetulus_griseus_chok1gshd
ENSLBEG00000005220	-	75	63.398	ENSCGRG00000018401	Smg7	53	61.706	Cricetulus_griseus_crigri
ENSLBEG00000005220	-	75	73.071	ENSCVAG00000011842	smg7	55	72.578	Cyprinodon_variegatus
ENSLBEG00000005220	-	75	72.483	ENSDARG00000060767	smg7	52	72.483	Danio_rerio
ENSLBEG00000005220	-	75	63.620	ENSETEG00000002654	SMG7	50	63.748	Echinops_telfairi
ENSLBEG00000005220	-	65	77.407	ENSECAG00000004313	SMG7	50	64.974	Equus_caballus
ENSLBEG00000005220	-	75	72.651	ENSELUG00000010293	smg7	53	72.651	Esox_lucius
ENSLBEG00000005220	-	75	64.623	ENSFCAG00000010900	SMG7	53	64.623	Felis_catus
ENSLBEG00000005220	-	75	61.857	ENSFALG00000003047	SMG7	53	61.857	Ficedula_albicollis
ENSLBEG00000005220	-	75	73.000	ENSFHEG00000011073	smg7	62	63.687	Fundulus_heteroclitus
ENSLBEG00000005220	-	76	62.545	ENSGMOG00000004916	smg7	50	62.657	Gadus_morhua
ENSLBEG00000005220	-	75	61.692	ENSGALG00000004667	SMG7	52	61.692	Gallus_gallus
ENSLBEG00000005220	-	75	73.913	ENSGAFG00000019000	smg7	64	62.415	Gambusia_affinis
ENSLBEG00000005220	-	76	75.960	ENSGACG00000001634	smg7	54	75.879	Gasterosteus_aculeatus
ENSLBEG00000005220	-	75	64.448	ENSGGOG00000002342	SMG7	52	62.833	Gorilla_gorilla
ENSLBEG00000005220	-	75	78.894	ENSHBUG00000003726	smg7	55	78.894	Haplochromis_burtoni
ENSLBEG00000005220	-	75	64.623	ENSHGLG00000009353	SMG7	52	63.000	Heterocephalus_glaber_female
ENSLBEG00000005220	-	75	62.833	ENSHGLG00100009637	-	52	62.833	Heterocephalus_glaber_male
ENSLBEG00000005220	-	75	72.194	ENSIPUG00000016997	smg7	54	71.812	Ictalurus_punctatus
ENSLBEG00000005220	-	75	63.923	ENSSTOG00000000401	SMG7	50	63.923	Ictidomys_tridecemlineatus
ENSLBEG00000005220	-	75	70.383	ENSKMAG00000004900	smg7	54	71.547	Kryptolebias_marmoratus
ENSLBEG00000005220	-	75	66.372	ENSLACG00000000972	SMG7	51	64.587	Latimeria_chalumnae
ENSLBEG00000005220	-	75	61.692	ENSLOCG00000002010	smg7	61	53.836	Lepisosteus_oculatus
ENSLBEG00000005220	-	75	64.623	ENSMFAG00000031653	SMG7	52	63.000	Macaca_fascicularis
ENSLBEG00000005220	-	75	64.623	ENSMMUG00000018458	SMG7	52	63.000	Macaca_mulatta
ENSLBEG00000005220	-	75	63.000	ENSMNEG00000034798	SMG7	52	63.000	Macaca_nemestrina
ENSLBEG00000005220	-	75	64.623	ENSMLEG00000037170	SMG7	52	63.000	Mandrillus_leucophaeus
ENSLBEG00000005220	-	75	79.195	ENSMAMG00000018733	smg7	51	79.195	Mastacembelus_armatus
ENSLBEG00000005220	-	75	78.727	ENSMZEG00005015247	smg7	52	78.727	Maylandia_zebra
ENSLBEG00000005220	-	75	61.526	ENSMGAG00000001561	SMG7	53	61.526	Meleagris_gallopavo
ENSLBEG00000005220	-	75	63.222	ENSMAUG00000019484	Smg7	52	61.538	Mesocricetus_auratus
ENSLBEG00000005220	-	75	64.273	ENSMICG00000007145	SMG7	52	62.667	Microcebus_murinus
ENSLBEG00000005220	-	75	63.573	ENSMOCG00000020748	Smg7	52	61.000	Microtus_ochrogaster
ENSLBEG00000005220	-	75	76.667	ENSMMOG00000001524	smg7	53	76.461	Mola_mola
ENSLBEG00000005220	-	75	62.667	ENSMODG00000007139	SMG7	56	62.667	Monodelphis_domestica
ENSLBEG00000005220	-	75	80.369	ENSMALG00000000061	smg7	50	80.369	Monopterus_albus
ENSLBEG00000005220	-	75	64.273	MGP_CAROLIEiJ_G0014704	Smg7	52	62.167	Mus_caroli
ENSLBEG00000005220	-	75	63.923	ENSMUSG00000042772	Smg7	52	62.040	Mus_musculus
ENSLBEG00000005220	-	75	64.273	MGP_PahariEiJ_G0027940	Smg7	52	62.167	Mus_pahari
ENSLBEG00000005220	-	75	63.923	MGP_SPRETEiJ_G0015511	Smg7	52	62.040	Mus_spretus
ENSLBEG00000005220	-	75	64.273	ENSNGAG00000009836	Smg7	52	62.667	Nannospalax_galili
ENSLBEG00000005220	-	70	78.393	ENSNBRG00000024343	smg7	52	78.393	Neolamprologus_brichardi
ENSLBEG00000005220	-	75	64.623	ENSNLEG00000018018	SMG7	52	63.000	Nomascus_leucogenys
ENSLBEG00000005220	-	75	64.623	ENSODEG00000010390	SMG7	52	62.833	Octodon_degus
ENSLBEG00000005220	-	75	79.397	ENSONIG00000000277	smg7	52	79.397	Oreochromis_niloticus
ENSLBEG00000005220	-	75	73.693	ENSORLG00000007314	smg7	55	73.524	Oryzias_latipes
ENSLBEG00000005220	-	75	73.862	ENSORLG00020015779	smg7	54	73.693	Oryzias_latipes_hni
ENSLBEG00000005220	-	75	73.768	ENSORLG00015012289	smg7	54	73.524	Oryzias_latipes_hsok
ENSLBEG00000005220	-	75	73.693	ENSOMEG00000002328	smg7	52	73.524	Oryzias_melastigma
ENSLBEG00000005220	-	75	64.273	ENSOARG00000001352	SMG7	51	64.273	Ovis_aries
ENSLBEG00000005220	-	75	63.000	ENSPPAG00000031619	SMG7	52	63.000	Pan_paniscus
ENSLBEG00000005220	-	75	64.623	ENSPPRG00000011222	SMG7	52	63.000	Panthera_pardus
ENSLBEG00000005220	-	75	64.623	ENSPTIG00000007242	SMG7	52	63.000	Panthera_tigris_altaica
ENSLBEG00000005220	-	75	64.623	ENSPTRG00000001764	SMG7	52	63.000	Pan_troglodytes
ENSLBEG00000005220	-	75	64.623	ENSPANG00000004520	SMG7	52	63.000	Papio_anubis
ENSLBEG00000005220	-	75	66.891	ENSPKIG00000007242	smg7	55	66.891	Paramormyrops_kingsleyae
ENSLBEG00000005220	-	75	63.972	ENSPSIG00000012201	SMG7	53	63.300	Pelodiscus_sinensis
ENSLBEG00000005220	-	75	63.573	ENSPEMG00000011315	Smg7	52	62.779	Peromyscus_maniculatus_bairdii
ENSLBEG00000005220	-	75	62.667	ENSPCIG00000003786	SMG7	54	62.667	Phascolarctos_cinereus
ENSLBEG00000005220	-	75	73.534	ENSPFOG00000019219	smg7	62	62.331	Poecilia_formosa
ENSLBEG00000005220	-	75	73.702	ENSPLAG00000001446	smg7	64	62.466	Poecilia_latipinna
ENSLBEG00000005220	-	75	73.869	ENSPMEG00000005218	smg7	66	62.602	Poecilia_mexicana
ENSLBEG00000005220	-	75	71.859	ENSPREG00000019039	smg7	69	60.800	Poecilia_reticulata
ENSLBEG00000005220	-	75	63.000	ENSPPYG00000000427	SMG7	52	63.000	Pongo_abelii
ENSLBEG00000005220	-	75	64.098	ENSPCOG00000011996	SMG7	50	64.098	Propithecus_coquereli
ENSLBEG00000005220	-	75	78.894	ENSPNYG00000007643	smg7	52	78.894	Pundamilia_nyererei
ENSLBEG00000005220	-	75	71.812	ENSPNAG00000011374	smg7	52	71.812	Pygocentrus_nattereri
ENSLBEG00000005220	-	75	64.273	ENSRNOG00000027962	Smg7	73	64.273	Rattus_norvegicus
ENSLBEG00000005220	-	75	64.623	ENSRBIG00000036316	SMG7	52	63.000	Rhinopithecus_bieti
ENSLBEG00000005220	-	75	64.623	ENSRROG00000035719	SMG7	52	63.000	Rhinopithecus_roxellana
ENSLBEG00000005220	-	75	64.273	ENSSBOG00000023454	SMG7	52	62.667	Saimiri_boliviensis_boliviensis
ENSLBEG00000005220	-	75	62.500	ENSSHAG00000013147	SMG7	52	62.500	Sarcophilus_harrisii
ENSLBEG00000005220	-	75	68.067	ENSSFOG00015017252	smg7	55	68.067	Scleropages_formosus
ENSLBEG00000005220	-	75	77.722	ENSSMAG00000006067	smg7	56	77.722	Scophthalmus_maximus
ENSLBEG00000005220	-	76	79.669	ENSSDUG00000017543	smg7	53	80.301	Seriola_dumerili
ENSLBEG00000005220	-	75	61.857	ENSSPUG00000002064	SMG7	52	61.857	Sphenodon_punctatus
ENSLBEG00000005220	-	75	79.070	ENSSPAG00000008733	smg7	53	79.070	Stegastes_partitus
ENSLBEG00000005220	-	75	64.448	ENSSSCG00000015558	SMG7	50	64.448	Sus_scrofa
ENSLBEG00000005220	-	75	61.857	ENSTGUG00000003928	SMG7	53	61.857	Taeniopygia_guttata
ENSLBEG00000005220	-	75	64.623	ENSUAMG00000017473	SMG7	52	64.623	Ursus_americanus
ENSLBEG00000005220	-	75	64.623	ENSUMAG00000016389	SMG7	52	64.623	Ursus_maritimus
ENSLBEG00000005220	-	75	64.098	ENSVVUG00000008976	SMG7	52	64.098	Vulpes_vulpes
ENSLBEG00000005220	-	75	57.616	ENSXETG00000012528	smg7	52	58.638	Xenopus_tropicalis
ENSLBEG00000005220	-	75	73.199	ENSXMAG00000007123	smg7	52	72.697	Xiphophorus_maculatus