EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000005301 (Gene tree)
Gene ID: 110000453
Gene Symbol: -
Alias: -
Full Name: transportin-2
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 13940 bases
Position: chrFKLU01000672.1:131551-145490
Accession: 110000453
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000006910	IBN_N	PF03810.19	1.8e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000007261	-	6097	XM_020655734	ENSLBEP00000006910	889 (aa)	XP_020511390	UPI0009B40823

Gene Model

Click here to download ENSLBEG00000005301's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000005301's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000005301	-	91	84.491	ENSLBEG00000009521	tnpo1	96	84.491
ENSLBEG00000005301	-	100	95.838	ENSLBEG00000026241	tnpo2	100	95.838

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000005301	-	100	93.251	ENSG00000105576	TNPO2	100	93.251	Homo_sapiens
ENSLBEG00000005301	-	100	99.775	ENSAPOG00000009339	TNPO2	100	99.775	Acanthochromis_polyacanthus
ENSLBEG00000005301	-	82	94.759	ENSAPOG00000013185	-	96	94.759	Acanthochromis_polyacanthus
ENSLBEG00000005301	-	100	90.656	ENSAMEG00000012123	TNPO2	100	90.656	Ailuropoda_melanoleuca
ENSLBEG00000005301	-	87	96.109	ENSACIG00000007518	tnpo2	98	95.736	Amphilophus_citrinellus
ENSLBEG00000005301	-	87	99.482	ENSACIG00000009586	-	100	99.482	Amphilophus_citrinellus
ENSLBEG00000005301	-	100	95.838	ENSAOCG00000010374	tnpo2	100	95.838	Amphiprion_ocellaris
ENSLBEG00000005301	-	100	99.775	ENSAOCG00000010152	-	100	99.775	Amphiprion_ocellaris
ENSLBEG00000005301	-	100	99.775	ENSAPEG00000013268	-	100	99.775	Amphiprion_percula
ENSLBEG00000005301	-	100	95.838	ENSAPEG00000008429	tnpo2	100	95.838	Amphiprion_percula
ENSLBEG00000005301	-	100	99.550	ENSATEG00000019171	-	100	99.550	Anabas_testudineus
ENSLBEG00000005301	-	100	95.163	ENSATEG00000024761	TNPO2	100	95.163	Anabas_testudineus
ENSLBEG00000005301	-	100	93.701	ENSACAG00000003576	TNPO2	100	93.363	Anolis_carolinensis
ENSLBEG00000005301	-	100	93.138	ENSANAG00000036645	TNPO2	100	93.138	Aotus_nancymaae
ENSLBEG00000005301	-	100	95.613	ENSACLG00000001853	tnpo2	100	95.613	Astatotilapia_calliptera
ENSLBEG00000005301	-	100	93.476	ENSACLG00000020672	-	100	93.476	Astatotilapia_calliptera
ENSLBEG00000005301	-	100	94.235	ENSAMXG00000010246	tnpo2	100	94.235	Astyanax_mexicanus
ENSLBEG00000005301	-	100	93.138	ENSBTAG00000011811	TNPO2	100	93.138	Bos_taurus
ENSLBEG00000005301	-	100	92.214	ENSCJAG00000005096	TNPO2	100	92.214	Callithrix_jacchus
ENSLBEG00000005301	-	100	93.363	ENSCAFG00000017226	TNPO2	85	93.363	Canis_familiaris
ENSLBEG00000005301	-	100	93.363	ENSCAFG00020005115	TNPO2	100	93.363	Canis_lupus_dingo
ENSLBEG00000005301	-	100	88.543	ENSCHIG00000011718	TNPO2	100	88.432	Capra_hircus
ENSLBEG00000005301	-	100	93.251	ENSTSYG00000003828	TNPO2	100	93.251	Carlito_syrichta
ENSLBEG00000005301	-	93	90.963	ENSCAPG00000015700	TNPO2	96	90.963	Cavia_aperea
ENSLBEG00000005301	-	100	93.026	ENSCPOG00000007033	TNPO2	100	93.026	Cavia_porcellus
ENSLBEG00000005301	-	100	93.251	ENSCCAG00000024574	TNPO2	100	93.251	Cebus_capucinus
ENSLBEG00000005301	-	100	92.214	ENSCATG00000042599	TNPO2	100	92.214	Cercocebus_atys
ENSLBEG00000005301	-	100	93.026	ENSCLAG00000013442	TNPO2	100	93.026	Chinchilla_lanigera
ENSLBEG00000005301	-	100	93.251	ENSCSAG00000006597	TNPO2	100	93.251	Chlorocebus_sabaeus
ENSLBEG00000005301	-	100	93.926	ENSCPBG00000023892	TNPO2	100	93.701	Chrysemys_picta_bellii
ENSLBEG00000005301	-	96	93.349	ENSCANG00000027834	TNPO2	98	93.349	Colobus_angolensis_palliatus
ENSLBEG00000005301	-	100	92.325	ENSCGRG00001015917	Tnpo2	100	92.325	Cricetulus_griseus_chok1gshd
ENSLBEG00000005301	-	100	93.363	ENSCGRG00000012601	Tnpo2	100	93.363	Cricetulus_griseus_crigri
ENSLBEG00000005301	-	100	91.339	ENSCSEG00000012923	tnpo2	100	91.339	Cynoglossus_semilaevis
ENSLBEG00000005301	-	87	96.899	ENSCSEG00000011477	-	100	96.899	Cynoglossus_semilaevis
ENSLBEG00000005301	-	100	99.550	ENSCVAG00000001908	TNPO2	100	99.550	Cyprinodon_variegatus
ENSLBEG00000005301	-	100	93.596	ENSCVAG00000002750	tnpo2	100	93.371	Cyprinodon_variegatus
ENSLBEG00000005301	-	100	91.564	ENSDARG00000038239	tnpo2	100	91.564	Danio_rerio
ENSLBEG00000005301	-	88	83.801	ENSDNOG00000043264	TNPO2	84	83.801	Dasypus_novemcinctus
ENSLBEG00000005301	-	100	86.667	ENSDORG00000014993	Tnpo2	100	91.241	Dipodomys_ordii
ENSLBEG00000005301	-	100	73.266	FBgn0024921	Tnpo	100	73.154	Drosophila_melanogaster
ENSLBEG00000005301	-	91	84.422	ENSETEG00000014785	TNPO2	92	84.422	Echinops_telfairi
ENSLBEG00000005301	-	100	93.251	ENSEASG00005004160	TNPO2	100	93.251	Equus_asinus_asinus
ENSLBEG00000005301	-	100	93.251	ENSECAG00000013673	TNPO2	100	93.251	Equus_caballus
ENSLBEG00000005301	-	100	95.228	ENSELUG00000008680	tnpo2	100	95.228	Esox_lucius
ENSLBEG00000005301	-	80	95.421	ENSELUG00000016542	-	99	86.684	Esox_lucius
ENSLBEG00000005301	-	100	92.214	ENSFCAG00000000467	TNPO2	100	92.214	Felis_catus
ENSLBEG00000005301	-	100	93.026	ENSFDAG00000021543	TNPO2	100	93.026	Fukomys_damarensis
ENSLBEG00000005301	-	100	93.933	ENSFHEG00000016501	tnpo2	100	93.483	Fundulus_heteroclitus
ENSLBEG00000005301	-	97	98.953	ENSFHEG00000009734	TNPO2	99	98.953	Fundulus_heteroclitus
ENSLBEG00000005301	-	80	98.148	ENSGMOG00000014237	-	90	98.148	Gadus_morhua
ENSLBEG00000005301	-	100	86.913	ENSGMOG00000009021	tnpo2	100	86.913	Gadus_morhua
ENSLBEG00000005301	-	100	94.382	ENSGAFG00000018993	tnpo2	100	94.382	Gambusia_affinis
ENSLBEG00000005301	-	100	99.438	ENSGAFG00000010401	TNPO2	100	99.438	Gambusia_affinis
ENSLBEG00000005301	-	100	93.926	ENSGAGG00000010150	TNPO2	100	93.701	Gopherus_agassizii
ENSLBEG00000005301	-	100	99.663	ENSHBUG00000018317	-	100	99.663	Haplochromis_burtoni
ENSLBEG00000005301	-	100	95.613	ENSHBUG00000014849	tnpo2	100	95.613	Haplochromis_burtoni
ENSLBEG00000005301	-	100	92.913	ENSHGLG00000016928	TNPO2	100	92.913	Heterocephalus_glaber_female
ENSLBEG00000005301	-	100	91.324	ENSHGLG00100009938	TNPO2	100	91.324	Heterocephalus_glaber_male
ENSLBEG00000005301	-	100	93.476	ENSHCOG00000005914	tnpo2	100	93.476	Hippocampus_comes
ENSLBEG00000005301	-	100	99.213	ENSHCOG00000020440	-	100	99.213	Hippocampus_comes
ENSLBEG00000005301	-	100	95.388	ENSIPUG00000005768	tnpo2	100	95.388	Ictalurus_punctatus
ENSLBEG00000005301	-	100	96.738	ENSIPUG00000006884	TNPO2	99	96.738	Ictalurus_punctatus
ENSLBEG00000005301	-	100	93.251	ENSSTOG00000006952	TNPO2	100	93.251	Ictidomys_tridecemlineatus
ENSLBEG00000005301	-	100	92.214	ENSJJAG00000016820	Tnpo2	100	92.214	Jaculus_jaculus
ENSLBEG00000005301	-	100	99.438	ENSKMAG00000018430	TNPO2	100	99.438	Kryptolebias_marmoratus
ENSLBEG00000005301	-	100	91.789	ENSKMAG00000021274	TNPO2	100	91.789	Kryptolebias_marmoratus
ENSLBEG00000005301	-	100	90.551	ENSLACG00000012322	TNPO2	99	90.551	Latimeria_chalumnae
ENSLBEG00000005301	-	100	96.288	ENSLOCG00000006178	tnpo2	99	96.288	Lepisosteus_oculatus
ENSLBEG00000005301	-	100	92.214	ENSLAFG00000003661	TNPO2	100	92.214	Loxodonta_africana
ENSLBEG00000005301	-	100	92.214	ENSMFAG00000037531	TNPO2	100	92.214	Macaca_fascicularis
ENSLBEG00000005301	-	100	93.251	ENSMMUG00000005684	TNPO2	100	93.251	Macaca_mulatta
ENSLBEG00000005301	-	100	93.251	ENSMNEG00000041024	TNPO2	100	93.251	Macaca_nemestrina
ENSLBEG00000005301	-	97	91.465	ENSMLEG00000018391	TNPO2	98	92.272	Mandrillus_leucophaeus
ENSLBEG00000005301	-	100	99.775	ENSMAMG00000011862	-	100	99.775	Mastacembelus_armatus
ENSLBEG00000005301	-	100	93.563	ENSMAMG00000023658	tnpo2	100	93.563	Mastacembelus_armatus
ENSLBEG00000005301	-	100	99.663	ENSMZEG00005007408	-	100	99.663	Maylandia_zebra
ENSLBEG00000005301	-	100	95.613	ENSMZEG00005023965	tnpo2	100	95.613	Maylandia_zebra
ENSLBEG00000005301	-	100	91.368	ENSMZEG00005011298	TNPO2	100	91.685	Maylandia_zebra
ENSLBEG00000005301	-	100	93.251	ENSMICG00000016153	TNPO2	100	93.251	Microcebus_murinus
ENSLBEG00000005301	-	100	93.363	ENSMOCG00000016489	Tnpo2	100	93.363	Microtus_ochrogaster
ENSLBEG00000005301	-	87	90.439	ENSMMOG00000005063	TNPO2	93	90.439	Mola_mola
ENSLBEG00000005301	-	88	98.464	ENSMMOG00000021390	TNPO2	99	98.464	Mola_mola
ENSLBEG00000005301	-	100	93.437	ENSMODG00000006888	TNPO2	100	93.437	Monodelphis_domestica
ENSLBEG00000005301	-	100	94.263	ENSMALG00000004721	tnpo2	100	94.263	Monopterus_albus
ENSLBEG00000005301	-	100	99.325	ENSMALG00000006232	TNPO2	100	99.325	Monopterus_albus
ENSLBEG00000005301	-	100	93.363	MGP_CAROLIEiJ_G0031326	Tnpo2	100	93.363	Mus_caroli
ENSLBEG00000005301	-	100	93.363	ENSMUSG00000031691	Tnpo2	100	93.363	Mus_musculus
ENSLBEG00000005301	-	100	93.363	MGP_PahariEiJ_G0022931	Tnpo2	100	93.363	Mus_pahari
ENSLBEG00000005301	-	100	93.363	MGP_SPRETEiJ_G0032445	Tnpo2	100	93.363	Mus_spretus
ENSLBEG00000005301	-	100	93.363	ENSMPUG00000004663	TNPO2	100	93.363	Mustela_putorius_furo
ENSLBEG00000005301	-	96	93.349	ENSMLUG00000012669	TNPO2	100	93.349	Myotis_lucifugus
ENSLBEG00000005301	-	100	93.363	ENSNGAG00000000650	Tnpo2	100	93.363	Nannospalax_galili
ENSLBEG00000005301	-	100	99.663	ENSNBRG00000023849	TNPO2	100	99.663	Neolamprologus_brichardi
ENSLBEG00000005301	-	100	90.326	ENSNBRG00000006242	TNPO2	100	90.326	Neolamprologus_brichardi
ENSLBEG00000005301	-	100	83.222	ENSNLEG00000012758	TNPO2	100	83.222	Nomascus_leucogenys
ENSLBEG00000005301	-	100	87.542	ENSMEUG00000016658	TNPO2	100	87.542	Notamacropus_eugenii
ENSLBEG00000005301	-	100	93.026	ENSODEG00000009670	TNPO2	100	93.026	Octodon_degus
ENSLBEG00000005301	-	100	95.726	ENSONIG00000002147	tnpo2	100	95.726	Oreochromis_niloticus
ENSLBEG00000005301	-	100	98.664	ENSONIG00000017706	-	100	98.664	Oreochromis_niloticus
ENSLBEG00000005301	-	100	93.588	ENSOANG00000010051	TNPO2	100	93.588	Ornithorhynchus_anatinus
ENSLBEG00000005301	-	91	92.936	ENSOCUG00000008251	TNPO2	90	93.093	Oryctolagus_cuniculus
ENSLBEG00000005301	-	56	98.800	ENSORLG00000011763	TNPO2	99	98.800	Oryzias_latipes
ENSLBEG00000005301	-	100	95.276	ENSORLG00000010363	tnpo2	100	95.276	Oryzias_latipes
ENSLBEG00000005301	-	56	98.600	ENSORLG00020001020	TNPO2	99	98.600	Oryzias_latipes_hni
ENSLBEG00000005301	-	100	95.276	ENSORLG00020015785	tnpo2	100	95.276	Oryzias_latipes_hni
ENSLBEG00000005301	-	100	94.713	ENSORLG00015005489	tnpo2	100	94.713	Oryzias_latipes_hsok
ENSLBEG00000005301	-	56	98.800	ENSORLG00015003941	TNPO2	99	98.800	Oryzias_latipes_hsok
ENSLBEG00000005301	-	100	95.051	ENSOMEG00000014877	TNPO2	100	95.051	Oryzias_melastigma
ENSLBEG00000005301	-	100	99.100	ENSOMEG00000013440	TNPO2	100	99.100	Oryzias_melastigma
ENSLBEG00000005301	-	100	92.463	ENSOARG00000011717	TNPO2	94	91.407	Ovis_aries
ENSLBEG00000005301	-	100	92.214	ENSPPAG00000019494	TNPO2	100	92.214	Pan_paniscus
ENSLBEG00000005301	-	100	92.214	ENSPPRG00000003075	TNPO2	100	92.214	Panthera_pardus
ENSLBEG00000005301	-	85	86.472	ENSPTIG00000011213	TNPO2	97	86.472	Panthera_tigris_altaica
ENSLBEG00000005301	-	100	92.214	ENSPTRG00000010535	TNPO2	100	92.214	Pan_troglodytes
ENSLBEG00000005301	-	100	92.214	ENSPANG00000016857	TNPO2	100	92.214	Papio_anubis
ENSLBEG00000005301	-	97	92.759	ENSPKIG00000002899	-	99	93.261	Paramormyrops_kingsleyae
ENSLBEG00000005301	-	100	94.601	ENSPKIG00000004824	tnpo2	100	94.601	Paramormyrops_kingsleyae
ENSLBEG00000005301	-	100	90.255	ENSPSIG00000010215	TNPO2	100	89.922	Pelodiscus_sinensis
ENSLBEG00000005301	-	56	95.000	ENSPMGG00000022850	tnpo2	99	94.000	Periophthalmus_magnuspinnatus
ENSLBEG00000005301	-	87	98.833	ENSPMGG00000016459	TNPO2	98	98.833	Periophthalmus_magnuspinnatus
ENSLBEG00000005301	-	100	92.325	ENSPEMG00000018702	Tnpo2	100	92.325	Peromyscus_maniculatus_bairdii
ENSLBEG00000005301	-	99	92.825	ENSPCIG00000015327	TNPO2	95	94.399	Phascolarctos_cinereus
ENSLBEG00000005301	-	100	99.550	ENSPFOG00000005417	TNPO2	100	99.550	Poecilia_formosa
ENSLBEG00000005301	-	100	94.382	ENSPFOG00000012466	tnpo2	100	94.382	Poecilia_formosa
ENSLBEG00000005301	-	93	99.517	ENSPLAG00000010687	TNPO2	97	99.517	Poecilia_latipinna
ENSLBEG00000005301	-	100	94.270	ENSPLAG00000018842	tnpo2	100	94.270	Poecilia_latipinna
ENSLBEG00000005301	-	100	99.550	ENSPMEG00000014011	-	100	99.550	Poecilia_mexicana
ENSLBEG00000005301	-	100	94.270	ENSPMEG00000006069	tnpo2	100	94.270	Poecilia_mexicana
ENSLBEG00000005301	-	100	99.550	ENSPREG00000000415	TNPO2	99	99.550	Poecilia_reticulata
ENSLBEG00000005301	-	100	93.933	ENSPREG00000001121	TNPO2	100	93.933	Poecilia_reticulata
ENSLBEG00000005301	-	100	93.251	ENSPPYG00000009602	TNPO2	100	93.251	Pongo_abelii
ENSLBEG00000005301	-	100	83.925	ENSPCAG00000014916	TNPO2	100	83.814	Procavia_capensis
ENSLBEG00000005301	-	100	93.251	ENSPCOG00000018386	TNPO2	100	93.251	Propithecus_coquereli
ENSLBEG00000005301	-	100	88.926	ENSPVAG00000013411	TNPO2	100	88.926	Pteropus_vampyrus
ENSLBEG00000005301	-	100	93.476	ENSPNYG00000001235	-	100	93.476	Pundamilia_nyererei
ENSLBEG00000005301	-	100	95.613	ENSPNYG00000013748	tnpo2	100	95.613	Pundamilia_nyererei
ENSLBEG00000005301	-	100	95.613	ENSPNAG00000024491	tnpo2	100	95.613	Pygocentrus_nattereri
ENSLBEG00000005301	-	100	97.975	ENSPNAG00000026208	-	100	97.975	Pygocentrus_nattereri
ENSLBEG00000005301	-	100	93.251	ENSRNOG00000003970	Tnpo2	97	93.251	Rattus_norvegicus
ENSLBEG00000005301	-	100	93.251	ENSRBIG00000036652	TNPO2	100	93.251	Rhinopithecus_bieti
ENSLBEG00000005301	-	100	93.251	ENSRROG00000040402	TNPO2	100	93.251	Rhinopithecus_roxellana
ENSLBEG00000005301	-	100	93.251	ENSSBOG00000019551	TNPO2	100	93.251	Saimiri_boliviensis_boliviensis
ENSLBEG00000005301	-	96	94.632	ENSSHAG00000015858	TNPO2	99	94.632	Sarcophilus_harrisii
ENSLBEG00000005301	-	100	96.625	ENSSFOG00015018955	TNPO2	100	96.625	Scleropages_formosus
ENSLBEG00000005301	-	100	94.601	ENSSFOG00015010934	tnpo2	100	94.601	Scleropages_formosus
ENSLBEG00000005301	-	100	95.951	ENSSMAG00000012008	tnpo2	100	95.951	Scophthalmus_maximus
ENSLBEG00000005301	-	100	99.550	ENSSMAG00000004050	-	100	99.550	Scophthalmus_maximus
ENSLBEG00000005301	-	100	99.775	ENSSDUG00000002607	TNPO2	100	99.775	Seriola_dumerili
ENSLBEG00000005301	-	100	96.063	ENSSDUG00000001767	tnpo2	100	96.063	Seriola_dumerili
ENSLBEG00000005301	-	100	96.063	ENSSLDG00000025629	tnpo2	100	96.063	Seriola_lalandi_dorsalis
ENSLBEG00000005301	-	100	99.888	ENSSLDG00000013107	-	100	99.888	Seriola_lalandi_dorsalis
ENSLBEG00000005301	-	82	93.250	ENSSARG00000003825	TNPO2	86	93.250	Sorex_araneus
ENSLBEG00000005301	-	100	93.065	ENSSPUG00000000736	TNPO2	100	92.729	Sphenodon_punctatus
ENSLBEG00000005301	-	100	97.528	ENSSPAG00000008511	-	100	97.528	Stegastes_partitus
ENSLBEG00000005301	-	100	95.838	ENSSPAG00000008512	tnpo2	100	95.838	Stegastes_partitus
ENSLBEG00000005301	-	100	93.363	ENSSSCG00000013726	TNPO2	100	93.363	Sus_scrofa
ENSLBEG00000005301	-	100	93.701	ENSTRUG00000012698	tnpo2	99	93.701	Takifugu_rubripes
ENSLBEG00000005301	-	100	98.988	ENSTRUG00000009453	TNPO2	100	98.988	Takifugu_rubripes
ENSLBEG00000005301	-	100	85.714	ENSTNIG00000003295	TNPO2	98	93.966	Tetraodon_nigroviridis
ENSLBEG00000005301	-	100	96.175	ENSTNIG00000014071	TNPO2	100	96.175	Tetraodon_nigroviridis
ENSLBEG00000005301	-	100	92.325	ENSTTRG00000005443	TNPO2	100	92.325	Tursiops_truncatus
ENSLBEG00000005301	-	100	92.214	ENSUAMG00000019621	TNPO2	100	92.214	Ursus_americanus
ENSLBEG00000005301	-	100	89.644	ENSUMAG00000006504	TNPO2	99	89.644	Ursus_maritimus
ENSLBEG00000005301	-	100	86.052	ENSVVUG00000023860	TNPO2	100	85.939	Vulpes_vulpes
ENSLBEG00000005301	-	100	91.789	ENSXETG00000004771	tnpo2	99	91.564	Xenopus_tropicalis
ENSLBEG00000005301	-	100	96.400	ENSXCOG00000014460	TNPO2	99	96.400	Xiphophorus_couchianus
ENSLBEG00000005301	-	100	94.270	ENSXMAG00000014217	TNPO2	100	94.270	Xiphophorus_maculatus
ENSLBEG00000005301	-	100	99.550	ENSXMAG00000012793	TNPO2	100	99.550	Xiphophorus_maculatus