EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000005325 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: alpha-1-antitrypsin homolog
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 5126 bases
Position: chrFKLU01000058.1:83-5208
Accession: 109983650
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000006904	RVT_1	PF00078.27	6.6e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000007255	-	840	-	ENSLBEP00000006904	279 (aa)	-	-
ENSLBET00000007264	-	357	XM_020633447	ENSLBEP00000006913	118 (aa)	XP_020489103	-

Gene Model

Click here to download ENSLBEG00000005325's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000005325's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000005325	-	60	64.072	ENSLBEG00000019648	-	54	64.072
ENSLBEG00000005325	-	60	62.275	ENSLBEG00000028866	-	53	62.275
ENSLBEG00000005325	-	59	61.212	ENSLBEG00000009763	-	57	61.212
ENSLBEG00000005325	-	67	36.364	ENSLBEG00000028549	-	51	36.364
ENSLBEG00000005325	-	50	64.029	ENSLBEG00000013551	-	50	64.029

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000005325	-	51	52.113	ENSAPOG00000023528	-	56	52.113	Acanthochromis_polyacanthus
ENSLBEG00000005325	-	61	48.521	ENSATEG00000002253	-	50	48.521	Anabas_testudineus
ENSLBEG00000005325	-	60	59.524	ENSATEG00000008662	-	51	59.524	Anabas_testudineus
ENSLBEG00000005325	-	56	56.962	ENSACLG00000019046	-	51	56.962	Astatotilapia_calliptera
ENSLBEG00000005325	-	60	48.810	ENSACLG00000008092	-	64	48.810	Astatotilapia_calliptera
ENSLBEG00000005325	-	58	50.932	ENSIPUG00000006650	-	56	50.932	Ictalurus_punctatus
ENSLBEG00000005325	-	60	56.548	ENSMALG00000018544	-	56	56.548	Monopterus_albus
ENSLBEG00000005325	-	66	51.630	ENSONIG00000021067	-	58	51.630	Oreochromis_niloticus
ENSLBEG00000005325	-	50	57.554	ENSOANG00000029335	-	51	57.554	Ornithorhynchus_anatinus
ENSLBEG00000005325	-	67	51.872	ENSORLG00000026272	-	54	51.872	Oryzias_latipes
ENSLBEG00000005325	-	67	51.337	ENSORLG00000029862	-	56	51.337	Oryzias_latipes
ENSLBEG00000005325	-	65	52.747	ENSORLG00000028294	-	56	52.747	Oryzias_latipes
ENSLBEG00000005325	-	60	56.548	ENSORLG00015002932	-	60	56.548	Oryzias_latipes_hsok
ENSLBEG00000005325	-	59	63.253	ENSORLG00015005396	-	50	63.253	Oryzias_latipes_hsok
ENSLBEG00000005325	-	60	54.167	ENSOMEG00000019261	-	55	54.167	Oryzias_melastigma
ENSLBEG00000005325	-	56	55.414	ENSPFOG00000024796	-	54	55.414	Poecilia_formosa
ENSLBEG00000005325	-	62	58.140	ENSPMEG00000005106	-	52	58.140	Poecilia_mexicana