EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000005435 (Gene tree)
Gene ID: 109998010
Gene Symbol: casc3
Alias: -
Full Name: CASC3%2C exon junction complex subunit
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 10460 bases
Position: chrFKLU01000454.1:356413-366872
Accession: 109998010
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000007025	Btz	PF09405.10	4.8e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000007385	-	4673	XM_020652711	ENSLBEP00000007025	805 (aa)	XP_020508367	UPI0009B47169

Gene Model

Click here to download ENSLBEG00000005435's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000005435's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000005435	casc3	57	60.112	ENSG00000108349	CASC3	63	67.606	Homo_sapiens
ENSLBEG00000005435	casc3	54	71.065	ENSAPOG00000008467	casc3	96	68.549	Acanthochromis_polyacanthus
ENSLBEG00000005435	casc3	57	60.452	ENSAMEG00000007764	CASC3	75	51.543	Ailuropoda_melanoleuca
ENSLBEG00000005435	casc3	70	86.986	ENSACIG00000000720	casc3	83	82.738	Amphilophus_citrinellus
ENSLBEG00000005435	casc3	100	72.044	ENSAOCG00000016676	casc3	96	70.513	Amphiprion_ocellaris
ENSLBEG00000005435	casc3	100	71.887	ENSAPEG00000006787	casc3	96	68.549	Amphiprion_percula
ENSLBEG00000005435	casc3	100	76.543	ENSATEG00000017196	casc3	96	75.707	Anabas_testudineus
ENSLBEG00000005435	casc3	53	67.626	ENSACAG00000002674	CASC3	61	68.939	Anolis_carolinensis
ENSLBEG00000005435	casc3	57	50.799	ENSANAG00000034820	-	82	51.118	Aotus_nancymaae
ENSLBEG00000005435	casc3	100	73.300	ENSACLG00000016198	casc3	96	74.003	Astatotilapia_calliptera
ENSLBEG00000005435	casc3	99	55.409	ENSAMXG00000032452	casc3	79	55.590	Astyanax_mexicanus
ENSLBEG00000005435	casc3	77	52.681	ENSBTAG00000006250	CASC3	64	67.832	Bos_taurus
ENSLBEG00000005435	casc3	56	62.500	ENSCJAG00000016032	CASC3	62	69.173	Callithrix_jacchus
ENSLBEG00000005435	casc3	57	60.112	ENSCAFG00000016141	CASC3	75	50.459	Canis_familiaris
ENSLBEG00000005435	casc3	76	51.447	ENSCAFG00020018882	CASC3	74	67.133	Canis_lupus_dingo
ENSLBEG00000005435	casc3	76	53.376	ENSCHIG00000006338	CASC3	64	67.133	Capra_hircus
ENSLBEG00000005435	casc3	54	66.887	ENSTSYG00000002975	CASC3	65	68.531	Carlito_syrichta
ENSLBEG00000005435	casc3	54	66.013	ENSCAPG00000010514	CASC3	74	68.310	Cavia_aperea
ENSLBEG00000005435	casc3	58	60.112	ENSCCAG00000033620	CASC3	65	68.345	Cebus_capucinus
ENSLBEG00000005435	casc3	57	60.112	ENSCATG00000033593	CASC3	64	68.345	Cercocebus_atys
ENSLBEG00000005435	casc3	57	61.798	ENSCLAG00000013730	CASC3	72	68.531	Chinchilla_lanigera
ENSLBEG00000005435	casc3	57	60.112	ENSCSAG00000002777	CASC3	64	68.345	Chlorocebus_sabaeus
ENSLBEG00000005435	casc3	58	65.734	ENSCPBG00000004750	CASC3	71	68.182	Chrysemys_picta_bellii
ENSLBEG00000005435	casc3	57	60.112	ENSCANG00000008814	CASC3	64	68.345	Colobus_angolensis_palliatus
ENSLBEG00000005435	casc3	59	59.322	ENSCGRG00000001952	Casc3	69	69.697	Cricetulus_griseus_crigri
ENSLBEG00000005435	casc3	100	68.881	ENSCSEG00000010047	casc3	96	65.854	Cynoglossus_semilaevis
ENSLBEG00000005435	casc3	79	69.702	ENSCVAG00000014935	casc3	96	67.436	Cyprinodon_variegatus
ENSLBEG00000005435	casc3	99	52.963	ENSDARG00000029911	casc3	79	52.615	Danio_rerio
ENSLBEG00000005435	casc3	58	60.674	ENSDNOG00000017249	CASC3	71	51.429	Dasypus_novemcinctus
ENSLBEG00000005435	casc3	58	59.783	ENSETEG00000013720	CASC3	65	68.531	Echinops_telfairi
ENSLBEG00000005435	casc3	57	60.674	ENSEASG00005002909	CASC3	76	67.832	Equus_asinus_asinus
ENSLBEG00000005435	casc3	57	60.674	ENSECAG00000019947	CASC3	56	67.832	Equus_caballus
ENSLBEG00000005435	casc3	100	55.924	ENSELUG00000015093	casc3	80	57.508	Esox_lucius
ENSLBEG00000005435	casc3	61	52.885	ENSFCAG00000014998	CASC3	76	51.227	Felis_catus
ENSLBEG00000005435	casc3	53	65.753	ENSFALG00000000412	CASC3	80	48.160	Ficedula_albicollis
ENSLBEG00000005435	casc3	58	64.024	ENSFDAG00000020696	CASC3	80	50.909	Fukomys_damarensis
ENSLBEG00000005435	casc3	56	63.694	ENSGALG00000031813	CASC3	79	52.632	Gallus_gallus
ENSLBEG00000005435	casc3	99	69.068	ENSGAFG00000017148	casc3	83	69.290	Gambusia_affinis
ENSLBEG00000005435	casc3	59	63.158	ENSGAGG00000008432	CASC3	79	68.182	Gopherus_agassizii
ENSLBEG00000005435	casc3	57	60.112	ENSGGOG00000005067	CASC3	64	68.345	Gorilla_gorilla
ENSLBEG00000005435	casc3	100	73.300	ENSHBUG00000013155	casc3	96	74.003	Haplochromis_burtoni
ENSLBEG00000005435	casc3	56	63.030	ENSHGLG00100002268	CASC3	72	67.376	Heterocephalus_glaber_male
ENSLBEG00000005435	casc3	100	59.410	ENSHCOG00000002664	casc3	79	61.111	Hippocampus_comes
ENSLBEG00000005435	casc3	53	68.345	ENSJJAG00000023525	Casc3	62	68.841	Jaculus_jaculus
ENSLBEG00000005435	casc3	93	69.560	ENSKMAG00000019507	casc3	99	69.470	Kryptolebias_marmoratus
ENSLBEG00000005435	casc3	79	46.686	ENSLACG00000013200	CASC3	66	52.778	Latimeria_chalumnae
ENSLBEG00000005435	casc3	58	57.592	ENSLAFG00000000606	CASC3	65	67.133	Loxodonta_africana
ENSLBEG00000005435	casc3	57	60.112	ENSMFAG00000041496	CASC3	83	51.368	Macaca_fascicularis
ENSLBEG00000005435	casc3	57	60.112	ENSMMUG00000045187	CASC3	64	68.345	Macaca_mulatta
ENSLBEG00000005435	casc3	57	60.112	ENSMLEG00000029049	CASC3	71	68.345	Mandrillus_leucophaeus
ENSLBEG00000005435	casc3	96	72.680	ENSMAMG00000005235	casc3	96	72.294	Mastacembelus_armatus
ENSLBEG00000005435	casc3	100	73.300	ENSMZEG00005003815	casc3	96	74.003	Maylandia_zebra
ENSLBEG00000005435	casc3	56	60.479	ENSMGAG00000013247	CASC3	71	69.065	Meleagris_gallopavo
ENSLBEG00000005435	casc3	57	58.989	ENSMICG00000003321	CASC3	64	68.345	Microcebus_murinus
ENSLBEG00000005435	casc3	73	52.000	ENSMOCG00000013644	Casc3	54	46.173	Microtus_ochrogaster
ENSLBEG00000005435	casc3	100	70.813	ENSMMOG00000014339	casc3	96	70.437	Mola_mola
ENSLBEG00000005435	casc3	54	60.645	ENSMODG00000013044	CASC3	58	65.909	Monodelphis_domestica
ENSLBEG00000005435	casc3	59	92.000	ENSMALG00000019771	casc3	84	83.740	Monopterus_albus
ENSLBEG00000005435	casc3	86	48.329	MGP_CAROLIEiJ_G0017099	Casc3	54	47.475	Mus_caroli
ENSLBEG00000005435	casc3	66	61.236	ENSMUSG00000078676	Casc3	84	48.232	Mus_musculus
ENSLBEG00000005435	casc3	66	61.236	MGP_SPRETEiJ_G0017943	Casc3	83	47.980	Mus_spretus
ENSLBEG00000005435	casc3	58	60.112	ENSMPUG00000014903	CASC3	73	51.274	Mustela_putorius_furo
ENSLBEG00000005435	casc3	57	59.551	ENSMLUG00000010520	CASC3	74	50.316	Myotis_lucifugus
ENSLBEG00000005435	casc3	77	44.688	ENSNGAG00000023121	Casc3	68	62.585	Nannospalax_galili
ENSLBEG00000005435	casc3	57	60.674	ENSNLEG00000001598	CASC3	64	69.065	Nomascus_leucogenys
ENSLBEG00000005435	casc3	56	64.848	ENSODEG00000017858	CASC3	76	50.746	Octodon_degus
ENSLBEG00000005435	casc3	100	74.907	ENSONIG00000009337	casc3	91	80.357	Oreochromis_niloticus
ENSLBEG00000005435	casc3	59	60.674	ENSOCUG00000002954	CASC3	76	50.153	Oryctolagus_cuniculus
ENSLBEG00000005435	casc3	100	63.041	ENSORLG00000023125	casc3	80	67.834	Oryzias_latipes
ENSLBEG00000005435	casc3	57	60.674	ENSOGAG00000034486	CASC3	64	67.606	Otolemur_garnettii
ENSLBEG00000005435	casc3	57	60.112	ENSPPAG00000035069	CASC3	65	68.345	Pan_paniscus
ENSLBEG00000005435	casc3	61	52.885	ENSPPRG00000023670	CASC3	76	50.920	Panthera_pardus
ENSLBEG00000005435	casc3	57	59.551	ENSPTIG00000010891	CASC3	64	66.901	Panthera_tigris_altaica
ENSLBEG00000005435	casc3	57	60.112	ENSPANG00000021708	CASC3	64	68.345	Papio_anubis
ENSLBEG00000005435	casc3	99	51.671	ENSPKIG00000023186	casc3	79	52.879	Paramormyrops_kingsleyae
ENSLBEG00000005435	casc3	59	60.112	ENSPEMG00000009774	Casc3	65	69.173	Peromyscus_maniculatus_bairdii
ENSLBEG00000005435	casc3	57	58.757	ENSPCIG00000025678	CASC3	65	69.065	Phascolarctos_cinereus
ENSLBEG00000005435	casc3	77	72.196	ENSPFOG00000017632	casc3	96	71.603	Poecilia_formosa
ENSLBEG00000005435	casc3	79	73.994	ENSPLAG00000005268	casc3	96	70.026	Poecilia_latipinna
ENSLBEG00000005435	casc3	50	87.050	ENSPMEG00000010299	casc3	73	75.862	Poecilia_mexicana
ENSLBEG00000005435	casc3	76	74.801	ENSPREG00000011856	casc3	91	73.878	Poecilia_reticulata
ENSLBEG00000005435	casc3	57	60.112	ENSPPYG00000008467	CASC3	64	68.345	Pongo_abelii
ENSLBEG00000005435	casc3	57	58.989	ENSPCOG00000008183	CASC3	64	68.841	Propithecus_coquereli
ENSLBEG00000005435	casc3	57	60.112	ENSPVAG00000008556	CASC3	62	69.173	Pteropus_vampyrus
ENSLBEG00000005435	casc3	100	73.424	ENSPNYG00000011962	casc3	96	74.131	Pundamilia_nyererei
ENSLBEG00000005435	casc3	99	54.869	ENSPNAG00000015928	casc3	79	54.559	Pygocentrus_nattereri
ENSLBEG00000005435	casc3	60	58.115	ENSRNOG00000009716	Casc3	70	69.173	Rattus_norvegicus
ENSLBEG00000005435	casc3	57	60.112	ENSRBIG00000033289	CASC3	65	68.345	Rhinopithecus_bieti
ENSLBEG00000005435	casc3	57	60.112	ENSRROG00000022337	CASC3	65	68.345	Rhinopithecus_roxellana
ENSLBEG00000005435	casc3	57	59.551	ENSSBOG00000031406	CASC3	70	68.345	Saimiri_boliviensis_boliviensis
ENSLBEG00000005435	casc3	57	59.887	ENSSHAG00000013338	CASC3	71	69.697	Sarcophilus_harrisii
ENSLBEG00000005435	casc3	99	52.421	ENSSFOG00015002645	casc3	80	54.421	Scleropages_formosus
ENSLBEG00000005435	casc3	100	70.438	ENSSMAG00000016096	casc3	96	69.697	Scophthalmus_maximus
ENSLBEG00000005435	casc3	100	73.684	ENSSDUG00000016893	casc3	91	71.338	Seriola_dumerili
ENSLBEG00000005435	casc3	81	76.323	ENSSLDG00000020308	casc3	78	92.437	Seriola_lalandi_dorsalis
ENSLBEG00000005435	casc3	100	72.783	ENSSPAG00000023008	casc3	80	76.266	Stegastes_partitus
ENSLBEG00000005435	casc3	58	58.919	ENSSSCG00000017477	CASC3	70	68.571	Sus_scrofa
ENSLBEG00000005435	casc3	96	65.645	ENSTRUG00000000673	casc3	95	65.045	Takifugu_rubripes
ENSLBEG00000005435	casc3	89	68.542	ENSTNIG00000003208	casc3	65	68.783	Tetraodon_nigroviridis
ENSLBEG00000005435	casc3	76	52.090	ENSUAMG00000015116	CASC3	76	67.133	Ursus_americanus
ENSLBEG00000005435	casc3	57	58.427	ENSUMAG00000017697	CASC3	92	65.035	Ursus_maritimus
ENSLBEG00000005435	casc3	57	60.112	ENSVVUG00000000997	CASC3	75	50.153	Vulpes_vulpes
ENSLBEG00000005435	casc3	100	70.762	ENSXMAG00000013937	casc3	96	69.270	Xiphophorus_maculatus