EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000005593 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: CUGBP Elav-like family member 2
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 5152 bases
Position: chrFKLU01001512.1:28881-34032
Accession: 110004340
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000007222	RRM_1	PF00076.22	3.3e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000007599	-	375	XM_020659889	ENSLBEP00000007222	124 (aa)	XP_020515545	-

Gene Model

Click here to download ENSLBEG00000005593's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000005593's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000005593	-	98	33.735	ENSLBEG00000007096	elavl4	67	31.356
ENSLBEG00000005593	-	88	32.110	ENSLBEG00000015023	elavl4	94	32.110
ENSLBEG00000005593	-	81	44.444	ENSLBEG00000028513	-	69	39.796
ENSLBEG00000005593	-	95	34.783	ENSLBEG00000027924	ELAVL2	73	34.906
ENSLBEG00000005593	-	95	33.898	ENSLBEG00000008073	elavl3	74	39.000
ENSLBEG00000005593	-	92	44.444	ENSLBEG00000021924	elavl1a	76	44.444
ENSLBEG00000005593	-	60	35.135	ENSLBEG00000027731	-	60	35.135

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000005593	-	100	95.349	ENSDARG00000002131	celf2	62	95.349	Danio_rerio
ENSLBEG00000005593	-	100	90.625	ENSKMAG00000004040	celf2	66	90.625	Kryptolebias_marmoratus
ENSLBEG00000005593	-	73	91.111	ENSPMAG00000008007	-	100	91.111	Petromyzon_marinus
ENSLBEG00000005593	-	72	96.629	ENSPNYG00000023850	-	79	96.629	Pundamilia_nyererei
ENSLBEG00000005593	-	100	95.349	ENSSSCG00000031855	-	73	95.349	Sus_scrofa