EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000005609 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: ESF1 homolog
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 807 bases
Position: chrFKLU01007664.1:3379-4185
Accession: 109978940
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000007237	NUC153	PF08159.12	2.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000007614	-	462	XM_020628097	ENSLBEP00000007237	153 (aa)	XP_020483753	-

Gene Model

Click here to download ENSLBEG00000005609's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000005609's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000005609	-	83	85.385	ENSLBEG00000021140	-	95	86.047
ENSLBEG00000005609	-	100	100.000	ENSLBEG00000001908	-	100	100.000
ENSLBEG00000005609	-	100	100.000	ENSLBEG00000007524	-	100	100.000
ENSLBEG00000005609	-	100	100.000	ENSLBEG00000007885	-	100	100.000
ENSLBEG00000005609	-	100	70.482	ENSLBEG00000007144	-	100	70.482
ENSLBEG00000005609	-	100	77.778	ENSLBEG00000016183	-	100	75.817
ENSLBEG00000005609	-	100	100.000	ENSLBEG00000015261	-	100	100.000
ENSLBEG00000005609	-	100	100.000	ENSLBEG00000003471	-	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000005609	-	99	52.632	ENSCPOG00000034000	-	99	55.263	Cavia_porcellus
ENSLBEG00000005609	-	99	57.237	ENSCPBG00000023302	-	99	57.237	Chrysemys_picta_bellii
ENSLBEG00000005609	-	99	56.579	ENSCGRG00000002170	-	99	59.211	Cricetulus_griseus_crigri
ENSLBEG00000005609	-	99	51.316	ENSGAGG00000008589	-	99	53.947	Gopherus_agassizii
ENSLBEG00000005609	-	99	55.921	ENSMMUG00000038493	-	99	55.921	Macaca_mulatta
ENSLBEG00000005609	-	99	53.289	ENSNGAG00000021039	-	99	55.921	Nannospalax_galili
ENSLBEG00000005609	-	61	63.542	ENSNBRG00000001132	-	100	65.625	Neolamprologus_brichardi
ENSLBEG00000005609	-	99	54.902	ENSOANG00000004380	-	99	58.170	Ornithorhynchus_anatinus
ENSLBEG00000005609	-	90	55.797	ENSPSIG00000017141	-	97	58.667	Pelodiscus_sinensis
ENSLBEG00000005609	-	99	66.667	ENSSFOG00015010118	-	99	66.667	Scleropages_formosus
ENSLBEG00000005609	-	99	62.893	ENSSMAG00000021068	-	99	62.264	Scophthalmus_maximus
ENSLBEG00000005609	-	69	69.159	ENSSLDG00000005715	-	96	70.476	Seriola_lalandi_dorsalis
ENSLBEG00000005609	-	99	53.947	ENSUAMG00000012282	-	99	57.237	Ursus_americanus
ENSLBEG00000005609	-	60	72.826	ENSXCOG00000010728	-	84	73.034	Xiphophorus_couchianus