EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000005640 (Gene tree)
Gene ID: 109985418
Gene Symbol: trpt1
Alias: zgc:113138
Full Name: tRNA phosphotransferase 1
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 3311 bases
Position: chrFKLU01000082.1:338650-341960
Accession: 109985418
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000007332	PTS_2-RNA	PF01885.16	1e-64	1	1
ENSLBEP00000007310	PTS_2-RNA	PF01885.16	4.6e-61	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000007710	-	690	-	ENSLBEP00000007332	229 (aa)	-	-
ENSLBET00000007689	-	687	XM_020635744	ENSLBEP00000007310	228 (aa)	XP_020491400	-

Gene Model

Click here to download ENSLBEG00000005640's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000005640's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000005640	trpt1	97	57.466	ENSG00000149743	TRPT1	98	50.867	Homo_sapiens
ENSLBEG00000005640	trpt1	89	86.341	ENSAPOG00000012925	trpt1	90	85.854	Acanthochromis_polyacanthus
ENSLBEG00000005640	trpt1	89	59.709	ENSAMEG00000018040	TRPT1	81	59.709	Ailuropoda_melanoleuca
ENSLBEG00000005640	trpt1	88	85.572	ENSACIG00000022413	trpt1	90	85.149	Amphilophus_citrinellus
ENSLBEG00000005640	trpt1	89	86.829	ENSAOCG00000001163	trpt1	78	86.341	Amphiprion_ocellaris
ENSLBEG00000005640	trpt1	90	85.854	ENSAPEG00000009873	trpt1	90	86.341	Amphiprion_percula
ENSLBEG00000005640	trpt1	89	85.714	ENSATEG00000014371	trpt1	93	83.412	Anabas_testudineus
ENSLBEG00000005640	trpt1	90	60.976	ENSACAG00000000696	TRPT1	89	61.386	Anolis_carolinensis
ENSLBEG00000005640	trpt1	97	59.009	ENSANAG00000019580	TRPT1	87	54.271	Aotus_nancymaae
ENSLBEG00000005640	trpt1	89	85.294	ENSACLG00000016893	trpt1	89	85.294	Astatotilapia_calliptera
ENSLBEG00000005640	trpt1	90	74.146	ENSAMXG00000010533	trpt1	88	75.500	Astyanax_mexicanus
ENSLBEG00000005640	trpt1	98	56.828	ENSBTAG00000016555	TRPT1	88	58.791	Bos_taurus
ENSLBEG00000005640	trpt1	97	58.036	ENSCJAG00000018169	TRPT1	81	59.615	Callithrix_jacchus
ENSLBEG00000005640	trpt1	88	60.099	ENSCAFG00000014591	TRPT1	82	58.738	Canis_familiaris
ENSLBEG00000005640	trpt1	89	59.804	ENSCAFG00020014101	TRPT1	82	60.099	Canis_lupus_dingo
ENSLBEG00000005640	trpt1	95	57.399	ENSCHIG00000021308	TRPT1	82	58.738	Capra_hircus
ENSLBEG00000005640	trpt1	77	55.056	ENSTSYG00000026766	TRPT1	88	55.056	Carlito_syrichta
ENSLBEG00000005640	trpt1	91	58.173	ENSCAPG00000016934	TRPT1	85	58.049	Cavia_aperea
ENSLBEG00000005640	trpt1	89	58.049	ENSCPOG00000002923	TRPT1	81	58.049	Cavia_porcellus
ENSLBEG00000005640	trpt1	77	59.551	ENSCCAG00000025683	TRPT1	98	52.353	Cebus_capucinus
ENSLBEG00000005640	trpt1	97	56.502	ENSCATG00000031563	TRPT1	87	52.020	Cercocebus_atys
ENSLBEG00000005640	trpt1	97	56.561	ENSCLAG00000016380	TRPT1	81	58.049	Chinchilla_lanigera
ENSLBEG00000005640	trpt1	97	57.207	ENSCSAG00000006952	TRPT1	81	58.252	Chlorocebus_sabaeus
ENSLBEG00000005640	trpt1	63	44.521	ENSCING00000002405	-	77	44.521	Ciona_intestinalis
ENSLBEG00000005640	trpt1	86	39.706	ENSCING00000024241	-	81	39.706	Ciona_intestinalis
ENSLBEG00000005640	trpt1	93	44.495	ENSCSAVG00000003949	-	88	46.193	Ciona_savignyi
ENSLBEG00000005640	trpt1	90	40.670	ENSCSAVG00000011071	-	60	42.487	Ciona_savignyi
ENSLBEG00000005640	trpt1	97	57.399	ENSCANG00000042980	TRPT1	87	53.030	Colobus_angolensis_palliatus
ENSLBEG00000005640	trpt1	95	56.164	ENSCGRG00001008474	Trpt1	82	56.796	Cricetulus_griseus_chok1gshd
ENSLBEG00000005640	trpt1	95	56.164	ENSCGRG00000009793	Trpt1	82	56.796	Cricetulus_griseus_crigri
ENSLBEG00000005640	trpt1	90	80.488	ENSCSEG00000005840	trpt1	87	80.693	Cynoglossus_semilaevis
ENSLBEG00000005640	trpt1	95	78.341	ENSCVAG00000006318	trpt1	95	80.392	Cyprinodon_variegatus
ENSLBEG00000005640	trpt1	87	73.367	ENSDARG00000037628	trpt1	88	73.367	Danio_rerio
ENSLBEG00000005640	trpt1	93	48.837	ENSDNOG00000044923	TRPT1	69	49.744	Dasypus_novemcinctus
ENSLBEG00000005640	trpt1	98	54.222	ENSDORG00000001624	Trpt1	83	56.585	Dipodomys_ordii
ENSLBEG00000005640	trpt1	84	41.237	FBgn0053057	CG33057	90	41.237	Drosophila_melanogaster
ENSLBEG00000005640	trpt1	96	54.091	ENSEBUG00000012569	-	90	55.882	Eptatretus_burgeri
ENSLBEG00000005640	trpt1	98	57.269	ENSEASG00005019983	TRPT1	81	59.223	Equus_asinus_asinus
ENSLBEG00000005640	trpt1	98	55.752	ENSECAG00000009917	TRPT1	98	50.276	Equus_caballus
ENSLBEG00000005640	trpt1	93	59.346	ENSEEUG00000012739	TRPT1	81	59.223	Erinaceus_europaeus
ENSLBEG00000005640	trpt1	89	78.325	ENSELUG00000007385	trpt1	90	78.049	Esox_lucius
ENSLBEG00000005640	trpt1	97	56.306	ENSFCAG00000024621	TRPT1	88	57.143	Felis_catus
ENSLBEG00000005640	trpt1	99	55.507	ENSFDAG00000002738	TRPT1	81	57.767	Fukomys_damarensis
ENSLBEG00000005640	trpt1	91	82.692	ENSFHEG00000002434	trpt1	90	83.824	Fundulus_heteroclitus
ENSLBEG00000005640	trpt1	89	70.388	ENSGMOG00000008716	trpt1	100	70.388	Gadus_morhua
ENSLBEG00000005640	trpt1	86	54.040	ENSGALG00000050256	TRPT1	66	54.040	Gallus_gallus
ENSLBEG00000005640	trpt1	87	82.915	ENSGAFG00000016762	trpt1	92	80.000	Gambusia_affinis
ENSLBEG00000005640	trpt1	88	83.168	ENSGACG00000016927	trpt1	95	82.081	Gasterosteus_aculeatus
ENSLBEG00000005640	trpt1	97	57.919	ENSGGOG00000012163	TRPT1	87	53.030	Gorilla_gorilla
ENSLBEG00000005640	trpt1	89	85.366	ENSHBUG00000012772	trpt1	89	84.878	Haplochromis_burtoni
ENSLBEG00000005640	trpt1	97	56.757	ENSHGLG00000013748	TRPT1	80	59.113	Heterocephalus_glaber_female
ENSLBEG00000005640	trpt1	97	56.757	ENSHGLG00100013048	TRPT1	80	59.113	Heterocephalus_glaber_male
ENSLBEG00000005640	trpt1	89	80.788	ENSHCOG00000000218	trpt1	89	79.512	Hippocampus_comes
ENSLBEG00000005640	trpt1	88	68.657	ENSIPUG00000002573	trpt1	88	68.657	Ictalurus_punctatus
ENSLBEG00000005640	trpt1	98	56.637	ENSSTOG00000014285	TRPT1	80	60.099	Ictidomys_tridecemlineatus
ENSLBEG00000005640	trpt1	97	56.000	ENSJJAG00000010855	Trpt1	83	59.223	Jaculus_jaculus
ENSLBEG00000005640	trpt1	89	82.439	ENSKMAG00000004214	trpt1	90	82.439	Kryptolebias_marmoratus
ENSLBEG00000005640	trpt1	89	63.547	ENSLACG00000016922	TRPT1	85	62.802	Latimeria_chalumnae
ENSLBEG00000005640	trpt1	89	67.488	ENSLOCG00000001345	trpt1	83	67.488	Lepisosteus_oculatus
ENSLBEG00000005640	trpt1	89	58.252	ENSLAFG00000009075	TRPT1	81	57.971	Loxodonta_africana
ENSLBEG00000005640	trpt1	97	56.502	ENSMFAG00000036828	TRPT1	87	52.020	Macaca_fascicularis
ENSLBEG00000005640	trpt1	97	56.561	ENSMMUG00000012940	TRPT1	81	57.561	Macaca_mulatta
ENSLBEG00000005640	trpt1	97	56.502	ENSMNEG00000033348	TRPT1	87	52.020	Macaca_nemestrina
ENSLBEG00000005640	trpt1	97	55.605	ENSMLEG00000031438	TRPT1	87	52.525	Mandrillus_leucophaeus
ENSLBEG00000005640	trpt1	89	87.317	ENSMAMG00000021617	trpt1	90	86.829	Mastacembelus_armatus
ENSLBEG00000005640	trpt1	89	85.366	ENSMZEG00005004773	trpt1	89	84.878	Maylandia_zebra
ENSLBEG00000005640	trpt1	74	58.140	ENSMAUG00000014107	Trpt1	82	58.140	Mesocricetus_auratus
ENSLBEG00000005640	trpt1	97	58.108	ENSMICG00000016950	TRPT1	88	53.500	Microcebus_murinus
ENSLBEG00000005640	trpt1	95	57.534	ENSMOCG00000021342	Trpt1	82	58.738	Microtus_ochrogaster
ENSLBEG00000005640	trpt1	90	85.854	ENSMMOG00000002896	trpt1	88	85.854	Mola_mola
ENSLBEG00000005640	trpt1	92	58.768	ENSMODG00000010226	TRPT1	89	59.391	Monodelphis_domestica
ENSLBEG00000005640	trpt1	89	85.854	ENSMALG00000012208	trpt1	83	85.854	Monopterus_albus
ENSLBEG00000005640	trpt1	95	56.422	MGP_CAROLIEiJ_G0022627	Trpt1	82	57.561	Mus_caroli
ENSLBEG00000005640	trpt1	95	56.422	ENSMUSG00000047656	Trpt1	82	57.561	Mus_musculus
ENSLBEG00000005640	trpt1	99	55.895	MGP_PahariEiJ_G0014121	Trpt1	82	58.252	Mus_pahari
ENSLBEG00000005640	trpt1	95	56.881	MGP_SPRETEiJ_G0023537	Trpt1	82	58.049	Mus_spretus
ENSLBEG00000005640	trpt1	98	56.444	ENSMPUG00000013272	TRPT1	74	57.767	Mustela_putorius_furo
ENSLBEG00000005640	trpt1	89	59.223	ENSMLUG00000024858	TRPT1	81	59.223	Myotis_lucifugus
ENSLBEG00000005640	trpt1	79	57.692	ENSNGAG00000007665	Trpt1	88	57.692	Nannospalax_galili
ENSLBEG00000005640	trpt1	89	79.091	ENSNBRG00000001528	trpt1	90	79.091	Neolamprologus_brichardi
ENSLBEG00000005640	trpt1	89	48.293	ENSNLEG00000033525	-	88	47.253	Nomascus_leucogenys
ENSLBEG00000005640	trpt1	89	58.128	ENSMEUG00000000943	TRPT1	80	57.635	Notamacropus_eugenii
ENSLBEG00000005640	trpt1	97	58.559	ENSOPRG00000015917	TRPT1	81	60.591	Ochotona_princeps
ENSLBEG00000005640	trpt1	97	56.502	ENSODEG00000015724	TRPT1	81	59.314	Octodon_degus
ENSLBEG00000005640	trpt1	89	83.902	ENSONIG00000005333	trpt1	89	83.415	Oreochromis_niloticus
ENSLBEG00000005640	trpt1	88	52.451	ENSOANG00000010375	TRPT1	89	52.451	Ornithorhynchus_anatinus
ENSLBEG00000005640	trpt1	96	57.273	ENSOCUG00000022244	TRPT1	81	58.738	Oryctolagus_cuniculus
ENSLBEG00000005640	trpt1	95	77.982	ENSORLG00000025159	trpt1	92	79.512	Oryzias_latipes
ENSLBEG00000005640	trpt1	96	77.828	ENSORLG00020018944	trpt1	92	80.488	Oryzias_latipes_hni
ENSLBEG00000005640	trpt1	78	81.006	ENSORLG00015017108	trpt1	79	81.006	Oryzias_latipes_hsok
ENSLBEG00000005640	trpt1	96	79.545	ENSOMEG00000018645	trpt1	92	81.463	Oryzias_melastigma
ENSLBEG00000005640	trpt1	89	58.738	ENSOGAG00000007134	TRPT1	81	58.937	Otolemur_garnettii
ENSLBEG00000005640	trpt1	95	57.848	ENSOARG00000004961	TRPT1	80	59.223	Ovis_aries
ENSLBEG00000005640	trpt1	94	51.152	ENSPPAG00000027600	TRPT1	88	58.011	Pan_paniscus
ENSLBEG00000005640	trpt1	79	57.692	ENSPPRG00000022870	TRPT1	88	57.692	Panthera_pardus
ENSLBEG00000005640	trpt1	77	57.865	ENSPTIG00000018872	TRPT1	96	50.292	Panthera_tigris_altaica
ENSLBEG00000005640	trpt1	94	51.152	ENSPTRG00000003822	TRPT1	88	58.011	Pan_troglodytes
ENSLBEG00000005640	trpt1	97	56.502	ENSPANG00000011001	TRPT1	87	52.020	Papio_anubis
ENSLBEG00000005640	trpt1	88	70.149	ENSPKIG00000008323	trpt1	89	68.293	Paramormyrops_kingsleyae
ENSLBEG00000005640	trpt1	96	58.371	ENSPSIG00000009910	TRPT1	86	59.512	Pelodiscus_sinensis
ENSLBEG00000005640	trpt1	91	75.481	ENSPMGG00000005037	trpt1	89	77.500	Periophthalmus_magnuspinnatus
ENSLBEG00000005640	trpt1	95	57.534	ENSPEMG00000013720	Trpt1	82	58.252	Peromyscus_maniculatus_bairdii
ENSLBEG00000005640	trpt1	89	57.143	ENSPMAG00000001449	trpt1	97	57.143	Petromyzon_marinus
ENSLBEG00000005640	trpt1	97	55.157	ENSPCIG00000008060	TRPT1	83	58.537	Phascolarctos_cinereus
ENSLBEG00000005640	trpt1	89	81.463	ENSPFOG00000009475	trpt1	91	80.976	Poecilia_formosa
ENSLBEG00000005640	trpt1	89	81.463	ENSPMEG00000003682	trpt1	91	80.976	Poecilia_mexicana
ENSLBEG00000005640	trpt1	89	82.439	ENSPREG00000015408	trpt1	91	81.951	Poecilia_reticulata
ENSLBEG00000005640	trpt1	89	59.512	ENSPPYG00000003116	TRPT1	81	59.512	Pongo_abelii
ENSLBEG00000005640	trpt1	97	55.856	ENSPCAG00000000762	TRPT1	81	58.049	Procavia_capensis
ENSLBEG00000005640	trpt1	96	58.371	ENSPCOG00000010370	TRPT1	88	53.000	Propithecus_coquereli
ENSLBEG00000005640	trpt1	89	78.636	ENSPNYG00000014805	trpt1	90	78.636	Pundamilia_nyererei
ENSLBEG00000005640	trpt1	89	70.936	ENSPNAG00000008548	trpt1	88	72.000	Pygocentrus_nattereri
ENSLBEG00000005640	trpt1	95	55.708	ENSRNOG00000023023	Trpt1	82	56.796	Rattus_norvegicus
ENSLBEG00000005640	trpt1	97	57.014	ENSRBIG00000040432	TRPT1	81	58.049	Rhinopithecus_bieti
ENSLBEG00000005640	trpt1	97	57.919	ENSRROG00000044905	TRPT1	87	53.030	Rhinopithecus_roxellana
ENSLBEG00000005640	trpt1	79	35.829	YOL102C	TPT1	80	35.829	Saccharomyces_cerevisiae
ENSLBEG00000005640	trpt1	97	58.108	ENSSBOG00000021466	TRPT1	81	59.223	Saimiri_boliviensis_boliviensis
ENSLBEG00000005640	trpt1	89	69.951	ENSSFOG00015005844	trpt1	90	69.951	Scleropages_formosus
ENSLBEG00000005640	trpt1	89	83.902	ENSSMAG00000017744	trpt1	90	83.415	Scophthalmus_maximus
ENSLBEG00000005640	trpt1	89	86.829	ENSSDUG00000017106	trpt1	91	86.341	Seriola_dumerili
ENSLBEG00000005640	trpt1	90	87.805	ENSSLDG00000015957	trpt1	83	88.482	Seriola_lalandi_dorsalis
ENSLBEG00000005640	trpt1	85	79.381	ENSSPAG00000007557	trpt1	77	79.381	Stegastes_partitus
ENSLBEG00000005640	trpt1	95	60.274	ENSSSCG00000013040	TRPT1	78	61.165	Sus_scrofa
ENSLBEG00000005640	trpt1	89	83.902	ENSTRUG00000023723	trpt1	89	83.415	Takifugu_rubripes
ENSLBEG00000005640	trpt1	89	86.207	ENSTNIG00000003381	trpt1	87	87.000	Tetraodon_nigroviridis
ENSLBEG00000005640	trpt1	94	54.167	ENSTBEG00000006023	TRPT1	81	55.122	Tupaia_belangeri
ENSLBEG00000005640	trpt1	97	55.856	ENSTTRG00000010252	TRPT1	79	58.128	Tursiops_truncatus
ENSLBEG00000005640	trpt1	99	56.828	ENSUAMG00000015208	TRPT1	81	59.223	Ursus_americanus
ENSLBEG00000005640	trpt1	99	56.828	ENSUMAG00000001410	TRPT1	81	59.223	Ursus_maritimus
ENSLBEG00000005640	trpt1	98	56.889	ENSVVUG00000029774	TRPT1	83	60.099	Vulpes_vulpes
ENSLBEG00000005640	trpt1	96	58.371	ENSXETG00000007196	trpt1	88	59.314	Xenopus_tropicalis
ENSLBEG00000005640	trpt1	87	82.412	ENSXCOG00000001614	trpt1	87	83.420	Xiphophorus_couchianus
ENSLBEG00000005640	trpt1	88	83.582	ENSXMAG00000003142	trpt1	90	84.000	Xiphophorus_maculatus