EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000005655 (Gene tree)
Gene ID: 109995823
Gene Symbol: larp1b
Alias: fc76b04|wu:fc76b04
Full Name: la-related protein 1B-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 32550 bases
Position: chrFKLU01000341.1:375987-408536
Accession: 109995823
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000007315	La	PF05383.17	7.3e-21	1	1
ENSLBEP00000007298	La	PF05383.17	7.7e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000007676	-	4795	XM_020649676	ENSLBEP00000007298	1079 (aa)	XP_020505332	UPI0009B427F9
ENSLBET00000007693	-	4615	XM_020649680	ENSLBEP00000007315	1019 (aa)	XP_020505336	UPI0009B3CB26

Gene Model

Click here to download ENSLBEG00000005655's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000005655's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000005655	larp1b	92	53.088	ENSLBEG00000027172	larp1	91	52.140

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000005655	larp1b	90	53.982	ENSG00000138709	LARP1B	97	56.082	Homo_sapiens
ENSLBEG00000005655	larp1b	100	81.924	ENSAPOG00000020101	larp1b	100	81.827	Acanthochromis_polyacanthus
ENSLBEG00000005655	larp1b	53	52.405	ENSAMEG00000002748	LARP1B	99	52.080	Ailuropoda_melanoleuca
ENSLBEG00000005655	larp1b	100	77.512	ENSACIG00000023890	larp1b	100	77.703	Amphilophus_citrinellus
ENSLBEG00000005655	larp1b	90	78.556	ENSAOCG00000014268	larp1b	99	78.017	Amphiprion_ocellaris
ENSLBEG00000005655	larp1b	100	82.575	ENSAPEG00000004126	larp1b	100	82.381	Amphiprion_percula
ENSLBEG00000005655	larp1b	100	83.896	ENSATEG00000017849	larp1b	100	83.703	Anabas_testudineus
ENSLBEG00000005655	larp1b	83	54.025	ENSAPLG00000010129	LARP1B	99	54.595	Anas_platyrhynchos
ENSLBEG00000005655	larp1b	85	56.329	ENSACAG00000011338	LARP1B	93	56.957	Anolis_carolinensis
ENSLBEG00000005655	larp1b	60	56.347	ENSANAG00000034618	LARP1B	83	54.108	Aotus_nancymaae
ENSLBEG00000005655	larp1b	100	80.219	ENSACLG00000011948	larp1b	100	79.854	Astatotilapia_calliptera
ENSLBEG00000005655	larp1b	98	55.398	ENSAMXG00000006805	larp1b	90	66.358	Astyanax_mexicanus
ENSLBEG00000005655	larp1b	85	57.656	ENSBTAG00000012135	LARP1B	95	50.558	Bos_taurus
ENSLBEG00000005655	larp1b	83	56.522	ENSCJAG00000003338	LARP1B	99	57.257	Callithrix_jacchus
ENSLBEG00000005655	larp1b	83	59.579	ENSCAFG00000003831	LARP1B	99	59.022	Canis_familiaris
ENSLBEG00000005655	larp1b	85	56.408	ENSCAFG00020018899	LARP1B	95	57.593	Canis_lupus_dingo
ENSLBEG00000005655	larp1b	85	56.356	ENSCHIG00000023144	LARP1B	95	56.569	Capra_hircus
ENSLBEG00000005655	larp1b	84	55.755	ENSCCAG00000021948	LARP1B	97	56.344	Cebus_capucinus
ENSLBEG00000005655	larp1b	83	55.353	ENSCATG00000013541	LARP1B	97	55.663	Cercocebus_atys
ENSLBEG00000005655	larp1b	83	55.983	ENSCSAG00000003582	LARP1B	97	56.297	Chlorocebus_sabaeus
ENSLBEG00000005655	larp1b	84	52.897	ENSCHOG00000005354	LARP1B	97	53.458	Choloepus_hoffmanni
ENSLBEG00000005655	larp1b	89	56.068	ENSCPBG00000017480	LARP1B	90	56.354	Chrysemys_picta_bellii
ENSLBEG00000005655	larp1b	84	55.873	ENSCANG00000026958	LARP1B	97	57.435	Colobus_angolensis_palliatus
ENSLBEG00000005655	larp1b	100	76.833	ENSCSEG00000013519	larp1b	100	75.837	Cynoglossus_semilaevis
ENSLBEG00000005655	larp1b	100	76.697	ENSCVAG00000005046	larp1b	100	76.514	Cyprinodon_variegatus
ENSLBEG00000005655	larp1b	98	61.407	ENSDARG00000061169	larp1b	92	64.782	Danio_rerio
ENSLBEG00000005655	larp1b	75	54.871	ENSETEG00000012497	LARP1B	75	54.376	Echinops_telfairi
ENSLBEG00000005655	larp1b	88	45.692	ENSEBUG00000003668	larp1b	95	44.910	Eptatretus_burgeri
ENSLBEG00000005655	larp1b	85	56.381	ENSEASG00005018106	LARP1B	99	55.941	Equus_asinus_asinus
ENSLBEG00000005655	larp1b	90	56.100	ENSECAG00000001088	LARP1B	84	56.078	Equus_caballus
ENSLBEG00000005655	larp1b	76	62.952	ENSELUG00000023774	larp1b	99	58.586	Esox_lucius
ENSLBEG00000005655	larp1b	86	52.899	ENSFALG00000008098	LARP1B	96	54.759	Ficedula_albicollis
ENSLBEG00000005655	larp1b	100	79.500	ENSFHEG00000010264	larp1b	97	79.403	Fundulus_heteroclitus
ENSLBEG00000005655	larp1b	87	69.180	ENSGMOG00000005207	larp1b	85	75.277	Gadus_morhua
ENSLBEG00000005655	larp1b	87	54.517	ENSGALG00000010207	LARP1B	91	53.741	Gallus_gallus
ENSLBEG00000005655	larp1b	89	78.920	ENSGAFG00000012012	larp1b	99	78.822	Gambusia_affinis
ENSLBEG00000005655	larp1b	100	72.340	ENSGACG00000004609	larp1b	100	72.518	Gasterosteus_aculeatus
ENSLBEG00000005655	larp1b	88	56.394	ENSGAGG00000017209	LARP1B	89	56.904	Gopherus_agassizii
ENSLBEG00000005655	larp1b	85	54.839	ENSGGOG00000015900	LARP1B	97	56.082	Gorilla_gorilla
ENSLBEG00000005655	larp1b	100	80.598	ENSHBUG00000009730	larp1b	100	80.598	Haplochromis_burtoni
ENSLBEG00000005655	larp1b	66	81.388	ENSHCOG00000000918	larp1b	96	81.241	Hippocampus_comes
ENSLBEG00000005655	larp1b	93	63.395	ENSIPUG00000012138	larp1b	88	64.916	Ictalurus_punctatus
ENSLBEG00000005655	larp1b	99	75.980	ENSKMAG00000011589	larp1b	97	82.234	Kryptolebias_marmoratus
ENSLBEG00000005655	larp1b	94	58.164	ENSLACG00000015247	LARP1B	88	59.919	Latimeria_chalumnae
ENSLBEG00000005655	larp1b	89	64.871	ENSLOCG00000010684	larp1b	99	59.961	Lepisosteus_oculatus
ENSLBEG00000005655	larp1b	83	56.531	ENSMFAG00000002218	LARP1B	97	56.850	Macaca_fascicularis
ENSLBEG00000005655	larp1b	83	56.424	ENSMMUG00000021347	LARP1B	97	56.742	Macaca_mulatta
ENSLBEG00000005655	larp1b	82	53.740	ENSMNEG00000030406	LARP1B	97	54.114	Macaca_nemestrina
ENSLBEG00000005655	larp1b	82	56.425	ENSMLEG00000009306	LARP1B	97	57.079	Mandrillus_leucophaeus
ENSLBEG00000005655	larp1b	99	83.431	ENSMAMG00000000081	larp1b	99	83.137	Mastacembelus_armatus
ENSLBEG00000005655	larp1b	73	80.293	ENSMZEG00005002545	larp1b	100	80.485	Maylandia_zebra
ENSLBEG00000005655	larp1b	79	55.882	ENSMGAG00000004809	LARP1B	99	50.692	Meleagris_gallopavo
ENSLBEG00000005655	larp1b	85	57.614	ENSMICG00000036111	LARP1B	97	58.233	Microcebus_murinus
ENSLBEG00000005655	larp1b	90	55.620	ENSMODG00000012300	LARP1B	87	55.713	Monodelphis_domestica
ENSLBEG00000005655	larp1b	100	82.021	ENSMALG00000003638	larp1b	100	81.535	Monopterus_albus
ENSLBEG00000005655	larp1b	87	56.921	ENSMPUG00000017365	LARP1B	85	56.046	Mustela_putorius_furo
ENSLBEG00000005655	larp1b	84	56.164	ENSMLUG00000010229	LARP1B	99	56.069	Myotis_lucifugus
ENSLBEG00000005655	larp1b	92	74.747	ENSNBRG00000023846	larp1b	100	74.968	Neolamprologus_brichardi
ENSLBEG00000005655	larp1b	85	55.031	ENSNLEG00000013819	LARP1B	97	55.867	Nomascus_leucogenys
ENSLBEG00000005655	larp1b	64	60.145	ENSMEUG00000010308	LARP1B	74	59.852	Notamacropus_eugenii
ENSLBEG00000005655	larp1b	78	51.636	ENSOPRG00000005478	LARP1B	89	52.644	Ochotona_princeps
ENSLBEG00000005655	larp1b	88	80.428	ENSONIG00000012386	larp1b	100	79.124	Oreochromis_niloticus
ENSLBEG00000005655	larp1b	85	54.859	ENSOCUG00000013330	LARP1B	96	55.834	Oryctolagus_cuniculus
ENSLBEG00000005655	larp1b	92	81.258	ENSORLG00000017954	larp1b	100	79.848	Oryzias_latipes
ENSLBEG00000005655	larp1b	100	74.863	ENSORLG00020013081	larp1b	100	74.314	Oryzias_latipes_hni
ENSLBEG00000005655	larp1b	100	75.919	ENSORLG00015009580	larp1b	100	80.101	Oryzias_latipes_hsok
ENSLBEG00000005655	larp1b	97	78.097	ENSOMEG00000004210	larp1b	100	77.992	Oryzias_melastigma
ENSLBEG00000005655	larp1b	83	58.206	ENSOGAG00000005771	LARP1B	100	57.659	Otolemur_garnettii
ENSLBEG00000005655	larp1b	85	56.329	ENSOARG00000015300	LARP1B	97	56.541	Ovis_aries
ENSLBEG00000005655	larp1b	85	54.943	ENSPPAG00000030439	LARP1B	97	56.189	Pan_paniscus
ENSLBEG00000005655	larp1b	85	54.839	ENSPTRG00000016437	LARP1B	97	56.082	Pan_troglodytes
ENSLBEG00000005655	larp1b	83	56.424	ENSPANG00000012488	LARP1B	97	56.742	Papio_anubis
ENSLBEG00000005655	larp1b	91	53.789	ENSPKIG00000014360	larp1b	95	55.044	Paramormyrops_kingsleyae
ENSLBEG00000005655	larp1b	87	56.923	ENSPSIG00000012885	LARP1B	99	57.067	Pelodiscus_sinensis
ENSLBEG00000005655	larp1b	78	70.726	ENSPMGG00000007207	larp1b	89	73.727	Periophthalmus_magnuspinnatus
ENSLBEG00000005655	larp1b	63	57.184	ENSPMAG00000002700	larp1b	99	50.261	Petromyzon_marinus
ENSLBEG00000005655	larp1b	85	58.038	ENSPCIG00000026516	LARP1B	94	64.256	Phascolarctos_cinereus
ENSLBEG00000005655	larp1b	63	74.928	ENSPFOG00000022837	-	99	75.072	Poecilia_formosa
ENSLBEG00000005655	larp1b	100	76.684	ENSPFOG00000019519	larp1b	100	76.950	Poecilia_formosa
ENSLBEG00000005655	larp1b	100	78.332	ENSPLAG00000007115	larp1b	100	78.241	Poecilia_latipinna
ENSLBEG00000005655	larp1b	100	79.119	ENSPMEG00000001224	larp1b	100	79.119	Poecilia_mexicana
ENSLBEG00000005655	larp1b	85	54.440	ENSPCAG00000007546	LARP1B	97	54.968	Procavia_capensis
ENSLBEG00000005655	larp1b	85	45.675	ENSPCOG00000021874	LARP1B	96	67.797	Propithecus_coquereli
ENSLBEG00000005655	larp1b	85	52.721	ENSPVAG00000005373	LARP1B	97	53.063	Pteropus_vampyrus
ENSLBEG00000005655	larp1b	73	80.501	ENSPNYG00000017357	larp1b	100	80.682	Pundamilia_nyererei
ENSLBEG00000005655	larp1b	98	59.121	ENSPNAG00000008823	larp1b	91	70.822	Pygocentrus_nattereri
ENSLBEG00000005655	larp1b	83	56.424	ENSRROG00000030771	LARP1B	97	56.742	Rhinopithecus_roxellana
ENSLBEG00000005655	larp1b	62	53.315	ENSSHAG00000014474	LARP1B	99	52.841	Sarcophilus_harrisii
ENSLBEG00000005655	larp1b	85	87.051	ENSSMAG00000006347	larp1b	97	84.107	Scophthalmus_maximus
ENSLBEG00000005655	larp1b	100	84.601	ENSSDUG00000004182	larp1b	100	85.371	Seriola_dumerili
ENSLBEG00000005655	larp1b	98	77.044	ENSSLDG00000014613	larp1b	96	82.773	Seriola_lalandi_dorsalis
ENSLBEG00000005655	larp1b	81	56.018	ENSSPUG00000011837	LARP1B	93	55.711	Sphenodon_punctatus
ENSLBEG00000005655	larp1b	100	82.049	ENSSPAG00000017772	larp1b	100	81.818	Stegastes_partitus
ENSLBEG00000005655	larp1b	88	55.306	ENSSSCG00000034280	LARP1B	98	77.528	Sus_scrofa
ENSLBEG00000005655	larp1b	68	62.034	ENSTGUG00000002098	-	90	60.682	Taeniopygia_guttata
ENSLBEG00000005655	larp1b	99	78.037	ENSTRUG00000005612	larp1b	99	78.426	Takifugu_rubripes
ENSLBEG00000005655	larp1b	89	76.056	ENSTNIG00000012398	larp1b	100	76.300	Tetraodon_nigroviridis
ENSLBEG00000005655	larp1b	58	60.197	ENSTBEG00000004177	LARP1B	66	60.000	Tupaia_belangeri
ENSLBEG00000005655	larp1b	74	58.756	ENSTTRG00000012984	LARP1B	89	56.954	Tursiops_truncatus
ENSLBEG00000005655	larp1b	85	56.797	ENSUMAG00000007373	LARP1B	95	58.192	Ursus_maritimus
ENSLBEG00000005655	larp1b	68	55.833	ENSVPAG00000007223	LARP1B	71	70.060	Vicugna_pacos
ENSLBEG00000005655	larp1b	85	56.873	ENSVVUG00000011307	LARP1B	99	57.078	Vulpes_vulpes
ENSLBEG00000005655	larp1b	89	51.279	ENSXETG00000022512	larp1b	93	51.263	Xenopus_tropicalis
ENSLBEG00000005655	larp1b	79	76.320	ENSXCOG00000004435	larp1b	99	67.831	Xiphophorus_couchianus
ENSLBEG00000005655	larp1b	100	80.375	ENSXMAG00000008150	larp1b	100	77.969	Xiphophorus_maculatus