EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000005669 (Gene tree)
Gene ID: 109980990
Gene Symbol: MBD4
Alias: MED1
Full Name: methyl-CpG binding domain 4%2C DNA glycosylase
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 3492 bases
Position: chrFKLU01000027.1:213823-217314
Accession: 109980990
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000007312	MBD	PF01429.19	3.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000007691	MBD4-201	2271	XM_020629592	ENSLBEP00000007312	520 (aa)	XP_020485248	UPI0009B4C8A5

Gene Model

Click here to download ENSLBEG00000005669's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000005669's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000005669	MBD4	91	64.092	ENSAPOG00000021668	mbd4	100	64.092	Acanthochromis_polyacanthus
ENSLBEG00000005669	MBD4	91	64.375	ENSAOCG00000001157	mbd4	100	64.375	Amphiprion_ocellaris
ENSLBEG00000005669	MBD4	91	64.792	ENSAPEG00000016131	mbd4	100	64.792	Amphiprion_percula
ENSLBEG00000005669	MBD4	99	65.341	ENSATEG00000014594	MBD4	99	65.341	Anabas_testudineus
ENSLBEG00000005669	MBD4	62	70.879	ENSACAG00000014733	MBD4	59	70.879	Anolis_carolinensis
ENSLBEG00000005669	MBD4	87	44.396	ENSAMXG00000017271	mbd4	92	44.518	Astyanax_mexicanus
ENSLBEG00000005669	MBD4	52	77.059	ENSCJAG00000017293	MBD4	91	37.319	Callithrix_jacchus
ENSLBEG00000005669	MBD4	81	50.725	ENSCCAG00000029796	MBD4	85	40.237	Cebus_capucinus
ENSLBEG00000005669	MBD4	74	36.407	ENSDORG00000000902	-	88	36.407	Dipodomys_ordii
ENSLBEG00000005669	MBD4	86	37.473	ENSEBUG00000010816	mbd4	98	37.473	Eptatretus_burgeri
ENSLBEG00000005669	MBD4	86	47.082	ENSELUG00000018483	MBD4	82	47.750	Esox_lucius
ENSLBEG00000005669	MBD4	86	50.524	ENSGMOG00000013830	mbd4	100	50.524	Gadus_morhua
ENSLBEG00000005669	MBD4	86	54.305	ENSGAFG00000016011	mbd4	98	54.425	Gambusia_affinis
ENSLBEG00000005669	MBD4	86	42.763	ENSGACG00000001970	-	90	42.702	Gasterosteus_aculeatus
ENSLBEG00000005669	MBD4	86	58.351	ENSKMAG00000015015	mbd4	97	59.013	Kryptolebias_marmoratus
ENSLBEG00000005669	MBD4	69	56.071	ENSLOCG00000013054	MBD4	50	75.862	Lepisosteus_oculatus
ENSLBEG00000005669	MBD4	66	47.753	ENSMAMG00000024084	-	95	47.753	Mastacembelus_armatus
ENSLBEG00000005669	MBD4	99	61.869	ENSMALG00000021517	mbd4	99	61.869	Monopterus_albus
ENSLBEG00000005669	MBD4	80	50.725	ENSNLEG00000005337	MBD4	85	39.006	Nomascus_leucogenys
ENSLBEG00000005669	MBD4	86	58.577	ENSONIG00000017212	mbd4	100	58.577	Oreochromis_niloticus
ENSLBEG00000005669	MBD4	88	53.632	ENSORLG00000011049	mbd4	99	53.632	Oryzias_latipes
ENSLBEG00000005669	MBD4	88	53.632	ENSORLG00020020013	mbd4	99	53.632	Oryzias_latipes_hni
ENSLBEG00000005669	MBD4	88	53.419	ENSORLG00015015342	mbd4	99	53.092	Oryzias_latipes_hsok
ENSLBEG00000005669	MBD4	90	53.653	ENSOMEG00000008819	mbd4	95	53.236	Oryzias_melastigma
ENSLBEG00000005669	MBD4	86	46.104	ENSPKIG00000012306	MBD4	75	46.104	Paramormyrops_kingsleyae
ENSLBEG00000005669	MBD4	86	53.982	ENSPFOG00000014471	mbd4	98	54.967	Poecilia_formosa
ENSLBEG00000005669	MBD4	80	49.275	ENSPPYG00000013417	MBD4	85	40.194	Pongo_abelii
ENSLBEG00000005669	MBD4	86	41.847	ENSPVAG00000005238	MBD4	85	40.156	Pteropus_vampyrus
ENSLBEG00000005669	MBD4	53	71.958	ENSPNAG00000000509	mbd4	95	45.752	Pygocentrus_nattereri
ENSLBEG00000005669	MBD4	86	39.961	ENSSBOG00000016810	MBD4	86	39.458	Saimiri_boliviensis_boliviensis
ENSLBEG00000005669	MBD4	87	44.513	ENSSFOG00015016292	mbd4	96	44.538	Scleropages_formosus
ENSLBEG00000005669	MBD4	94	62.076	ENSSMAG00000013958	-	74	62.777	Scophthalmus_maximus
ENSLBEG00000005669	MBD4	92	63.730	ENSSDUG00000001365	mbd4	99	63.730	Seriola_dumerili
ENSLBEG00000005669	MBD4	81	59.397	ENSSLDG00000010295	MBD4	87	59.397	Seriola_lalandi_dorsalis
ENSLBEG00000005669	MBD4	62	64.091	ENSSPUG00000017344	MBD4	60	64.091	Sphenodon_punctatus
ENSLBEG00000005669	MBD4	91	57.082	ENSTRUG00000010124	mbd4	100	57.082	Takifugu_rubripes
ENSLBEG00000005669	MBD4	86	55.388	ENSTNIG00000017927	mbd4	100	55.388	Tetraodon_nigroviridis
ENSLBEG00000005669	MBD4	88	42.251	ENSXETG00000026622	mbd4	91	41.632	Xenopus_tropicalis
ENSLBEG00000005669	MBD4	86	54.525	ENSXMAG00000021129	mbd4	98	54.825	Xiphophorus_maculatus