EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000005715 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 8690 bases
Position: chrFKLU01000135.1:1052924-1061613
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000007397	zf-C2H2	PF00096.26	9.4e-53	1	9
ENSLBEP00000007397	zf-C2H2	PF00096.26	9.4e-53	2	9
ENSLBEP00000007397	zf-C2H2	PF00096.26	9.4e-53	3	9
ENSLBEP00000007397	zf-C2H2	PF00096.26	9.4e-53	4	9
ENSLBEP00000007397	zf-C2H2	PF00096.26	9.4e-53	5	9
ENSLBEP00000007397	zf-C2H2	PF00096.26	9.4e-53	6	9
ENSLBEP00000007397	zf-C2H2	PF00096.26	9.4e-53	7	9
ENSLBEP00000007397	zf-C2H2	PF00096.26	9.4e-53	8	9
ENSLBEP00000007397	zf-C2H2	PF00096.26	9.4e-53	9	9
ENSLBEP00000007397	zf-met	PF12874.7	0.00031	1	2
ENSLBEP00000007397	zf-met	PF12874.7	0.00031	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000007782	-	1851	-	ENSLBEP00000007397	616 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000005715's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000005715's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000005715	-	87	36.788	ENSLBEG00000012201	-	72	36.788
ENSLBEG00000005715	-	73	44.048	ENSLBEG00000022059	-	80	44.048
ENSLBEG00000005715	-	88	35.786	ENSLBEG00000008115	-	98	39.583
ENSLBEG00000005715	-	78	36.842	ENSLBEG00000018509	-	93	36.842
ENSLBEG00000005715	-	87	42.289	ENSLBEG00000000393	-	80	42.289
ENSLBEG00000005715	-	88	40.415	ENSLBEG00000011289	-	79	40.415
ENSLBEG00000005715	-	81	42.276	ENSLBEG00000008850	-	53	40.351
ENSLBEG00000005715	-	85	38.889	ENSLBEG00000004892	-	89	38.889
ENSLBEG00000005715	-	83	38.537	ENSLBEG00000000435	-	72	38.537
ENSLBEG00000005715	-	78	34.302	ENSLBEG00000014527	-	50	34.302
ENSLBEG00000005715	-	74	38.202	ENSLBEG00000012438	ZNF319	94	38.202
ENSLBEG00000005715	-	78	36.585	ENSLBEG00000017424	-	96	36.585
ENSLBEG00000005715	-	93	32.766	ENSLBEG00000002278	-	86	32.766
ENSLBEG00000005715	-	80	36.680	ENSLBEG00000000369	-	93	36.680
ENSLBEG00000005715	-	88	39.062	ENSLBEG00000024737	-	96	39.516
ENSLBEG00000005715	-	76	39.437	ENSLBEG00000020297	gfi1b	85	39.437
ENSLBEG00000005715	-	73	50.980	ENSLBEG00000020128	-	93	50.980
ENSLBEG00000005715	-	79	34.121	ENSLBEG00000025689	-	70	32.898
ENSLBEG00000005715	-	81	37.073	ENSLBEG00000024536	-	95	37.073
ENSLBEG00000005715	-	74	42.553	ENSLBEG00000026552	-	51	42.553
ENSLBEG00000005715	-	79	37.879	ENSLBEG00000017726	-	91	33.475
ENSLBEG00000005715	-	83	44.118	ENSLBEG00000002357	-	96	38.723
ENSLBEG00000005715	-	77	44.615	ENSLBEG00000017605	snai1a	79	44.615
ENSLBEG00000005715	-	81	39.744	ENSLBEG00000024509	-	99	33.129
ENSLBEG00000005715	-	85	45.902	ENSLBEG00000004833	-	69	45.902
ENSLBEG00000005715	-	72	35.922	ENSLBEG00000011028	-	81	35.922
ENSLBEG00000005715	-	86	37.824	ENSLBEG00000018970	-	85	37.824
ENSLBEG00000005715	-	76	36.481	ENSLBEG00000011349	-	78	36.481
ENSLBEG00000005715	-	88	35.452	ENSLBEG00000008606	-	96	42.105
ENSLBEG00000005715	-	72	36.364	ENSLBEG00000006161	-	80	35.333
ENSLBEG00000005715	-	65	44.318	ENSLBEG00000011588	-	71	44.318
ENSLBEG00000005715	-	89	37.063	ENSLBEG00000007937	-	85	37.063
ENSLBEG00000005715	-	82	34.375	ENSLBEG00000005729	znf652	89	30.660
ENSLBEG00000005715	-	87	40.513	ENSLBEG00000008689	-	92	40.513
ENSLBEG00000005715	-	77	48.252	ENSLBEG00000001920	-	87	48.252
ENSLBEG00000005715	-	89	37.245	ENSLBEG00000011210	-	72	37.245
ENSLBEG00000005715	-	65	33.708	ENSLBEG00000006963	-	54	34.831
ENSLBEG00000005715	-	76	42.614	ENSLBEG00000015264	-	88	42.614
ENSLBEG00000005715	-	79	38.158	ENSLBEG00000007106	-	77	38.158
ENSLBEG00000005715	-	73	45.161	ENSLBEG00000026457	-	99	36.842
ENSLBEG00000005715	-	87	38.224	ENSLBEG00000014211	-	95	47.541
ENSLBEG00000005715	-	77	34.454	ENSLBEG00000015419	scrt2	68	34.454
ENSLBEG00000005715	-	80	40.092	ENSLBEG00000004867	-	71	40.092
ENSLBEG00000005715	-	73	38.889	ENSLBEG00000024458	-	94	38.889
ENSLBEG00000005715	-	70	31.915	ENSLBEG00000024451	-	53	31.915
ENSLBEG00000005715	-	85	33.613	ENSLBEG00000028271	-	79	33.613
ENSLBEG00000005715	-	73	36.449	ENSLBEG00000010132	-	73	36.449
ENSLBEG00000005715	-	90	37.500	ENSLBEG00000011313	-	73	37.500
ENSLBEG00000005715	-	85	35.802	ENSLBEG00000026019	-	72	35.838
ENSLBEG00000005715	-	81	41.176	ENSLBEG00000028628	znf1174	53	41.176
ENSLBEG00000005715	-	51	48.718	ENSLBEG00000012947	-	84	48.718
ENSLBEG00000005715	-	80	39.181	ENSLBEG00000006924	-	100	39.181
ENSLBEG00000005715	-	75	35.758	ENSLBEG00000008320	-	67	35.758
ENSLBEG00000005715	-	93	32.222	ENSLBEG00000009580	-	90	42.735
ENSLBEG00000005715	-	82	34.444	ENSLBEG00000011006	-	59	34.444
ENSLBEG00000005715	-	78	39.130	ENSLBEG00000000972	snai2	82	39.130
ENSLBEG00000005715	-	80	34.737	ENSLBEG00000019067	zbtb47b	56	34.737
ENSLBEG00000005715	-	81	36.220	ENSLBEG00000012151	zbtb48	63	36.220
ENSLBEG00000005715	-	86	34.286	ENSLBEG00000014676	-	58	34.286
ENSLBEG00000005715	-	76	43.210	ENSLBEG00000001715	-	91	43.210
ENSLBEG00000005715	-	77	37.805	ENSLBEG00000008439	znf319b	83	30.402
ENSLBEG00000005715	-	78	45.562	ENSLBEG00000017450	-	96	45.562
ENSLBEG00000005715	-	79	45.033	ENSLBEG00000014263	-	51	45.033
ENSLBEG00000005715	-	80	46.392	ENSLBEG00000008909	-	93	46.392
ENSLBEG00000005715	-	77	43.750	ENSLBEG00000015694	-	85	43.750
ENSLBEG00000005715	-	79	35.119	ENSLBEG00000013235	-	80	35.119
ENSLBEG00000005715	-	88	33.566	ENSLBEG00000013821	hic2	50	33.566
ENSLBEG00000005715	-	77	38.095	ENSLBEG00000002594	-	73	38.095
ENSLBEG00000005715	-	88	35.945	ENSLBEG00000011250	-	89	36.199
ENSLBEG00000005715	-	83	40.000	ENSLBEG00000004805	-	96	43.005
ENSLBEG00000005715	-	83	32.743	ENSLBEG00000016562	znf646	99	32.743
ENSLBEG00000005715	-	90	41.667	ENSLBEG00000010278	-	96	40.000
ENSLBEG00000005715	-	81	50.847	ENSLBEG00000001756	-	98	50.847
ENSLBEG00000005715	-	82	35.217	ENSLBEG00000021260	-	93	35.217
ENSLBEG00000005715	-	80	33.929	ENSLBEG00000017407	-	58	33.929
ENSLBEG00000005715	-	94	35.135	ENSLBEG00000000373	-	87	35.135
ENSLBEG00000005715	-	73	35.766	ENSLBEG00000011751	znf526	63	35.766
ENSLBEG00000005715	-	79	38.356	ENSLBEG00000026373	e4f1	70	38.333
ENSLBEG00000005715	-	73	36.559	ENSLBEG00000009567	-	71	31.905
ENSLBEG00000005715	-	89	40.000	ENSLBEG00000007251	-	93	38.889
ENSLBEG00000005715	-	89	36.727	ENSLBEG00000011145	si:cabz01071911.3	97	36.727
ENSLBEG00000005715	-	75	37.121	ENSLBEG00000025696	-	84	37.121
ENSLBEG00000005715	-	75	35.211	ENSLBEG00000024454	-	63	35.211
ENSLBEG00000005715	-	88	35.217	ENSLBEG00000007837	-	94	35.217
ENSLBEG00000005715	-	92	35.938	ENSLBEG00000013570	-	97	42.276
ENSLBEG00000005715	-	76	35.714	ENSLBEG00000028243	-	94	35.714
ENSLBEG00000005715	-	80	43.243	ENSLBEG00000001132	-	97	43.243
ENSLBEG00000005715	-	75	47.458	ENSLBEG00000010165	-	95	40.376
ENSLBEG00000005715	-	76	43.333	ENSLBEG00000014282	-	75	43.333
ENSLBEG00000005715	-	77	34.513	ENSLBEG00000023388	-	50	33.588
ENSLBEG00000005715	-	94	35.887	ENSLBEG00000000343	-	88	36.364
ENSLBEG00000005715	-	78	36.885	ENSLBEG00000011465	-	95	36.885
ENSLBEG00000005715	-	76	34.000	ENSLBEG00000020747	-	97	34.000
ENSLBEG00000005715	-	76	34.524	ENSLBEG00000027993	-	76	34.524
ENSLBEG00000005715	-	81	38.182	ENSLBEG00000011091	si:cabz01071911.3	97	38.182
ENSLBEG00000005715	-	74	42.105	ENSLBEG00000008733	-	53	42.105
ENSLBEG00000005715	-	75	30.566	ENSLBEG00000016666	znf341	52	30.566
ENSLBEG00000005715	-	74	38.393	ENSLBEG00000026573	-	66	38.393
ENSLBEG00000005715	-	83	36.559	ENSLBEG00000005307	znf236	70	36.559
ENSLBEG00000005715	-	79	32.970	ENSLBEG00000011986	-	93	32.419

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000005715	-	89	74.048	ENSAOCG00000013656	-	72	74.048	Amphiprion_ocellaris
ENSLBEG00000005715	-	82	53.137	ENSHCOG00000000800	-	87	53.137	Hippocampus_comes
ENSLBEG00000005715	-	82	55.777	ENSKMAG00000007892	-	87	62.675	Kryptolebias_marmoratus
ENSLBEG00000005715	-	88	53.614	ENSOMEG00000021903	-	74	48.829	Oryzias_melastigma
ENSLBEG00000005715	-	69	50.000	ENSPMEG00000019463	-	96	50.000	Poecilia_mexicana
ENSLBEG00000005715	-	89	71.724	ENSSMAG00000021271	-	73	71.724	Scophthalmus_maximus
ENSLBEG00000005715	-	89	76.420	ENSSDUG00000016450	-	74	76.420	Seriola_dumerili
ENSLBEG00000005715	-	90	53.359	ENSSPAG00000023063	-	70	60.932	Stegastes_partitus
ENSLBEG00000005715	-	86	70.213	ENSTRUG00000022843	-	71	70.213	Takifugu_rubripes