EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000005791 (Gene tree)
Gene ID: 110004830
Gene Symbol: -
Alias: -
Full Name: ras-related protein Rab-1B-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 3604 bases
Position: chrFKLU01001774.1:3275-6878
Accession: 110004830
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000007497	MMR_HSR1	PF01926.23	9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000007889	-	633	XM_020660331	ENSLBEP00000007497	210 (aa)	XP_020515987	-

Gene Model

Click here to download ENSLBEG00000005791's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000005791's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000005791	-	82	42.697	ENSLBEG00000003235	rab22a	90	42.697
ENSLBEG00000005791	-	96	35.681	ENSLBEG00000026006	rab34a	77	35.681
ENSLBEG00000005791	-	55	30.328	ENSLBEG00000027205	-	63	30.328
ENSLBEG00000005791	-	72	38.994	ENSLBEG00000005128	-	71	38.994
ENSLBEG00000005791	-	77	40.828	ENSLBEG00000017798	-	82	40.828
ENSLBEG00000005791	-	76	44.785	ENSLBEG00000004128	rab5c	80	43.503
ENSLBEG00000005791	-	80	50.289	ENSLBEG00000006087	rab11ba	80	50.289
ENSLBEG00000005791	-	86	44.271	ENSLBEG00000003101	rab4a	90	44.271
ENSLBEG00000005791	-	79	49.704	ENSLBEG00000013463	rab15	79	49.704
ENSLBEG00000005791	-	98	41.429	ENSLBEG00000016446	rab25b	96	41.429
ENSLBEG00000005791	-	73	35.443	ENSLBEG00000013176	rab23	87	33.708
ENSLBEG00000005791	-	99	44.076	ENSLBEG00000015248	rab11bb	96	44.076
ENSLBEG00000005791	-	92	76.000	ENSLBEG00000027781	rab1ab	99	76.000
ENSLBEG00000005791	-	77	53.012	ENSLBEG00000001146	rab30	82	53.012
ENSLBEG00000005791	-	60	31.061	ENSLBEG00000011152	arl4d	66	31.061
ENSLBEG00000005791	-	77	35.119	ENSLBEG00000025705	si:ch73-116o1.2	80	35.119
ENSLBEG00000005791	-	61	31.579	ENSLBEG00000016494	arl2	69	31.579
ENSLBEG00000005791	-	99	43.602	ENSLBEG00000004172	-	96	43.602
ENSLBEG00000005791	-	99	44.076	ENSLBEG00000016417	rab11al	96	44.076
ENSLBEG00000005791	-	88	35.897	ENSLBEG00000018180	si:dkey-13a21.4	96	35.897
ENSLBEG00000005791	-	90	31.443	ENSLBEG00000019137	rhebl1	95	31.443
ENSLBEG00000005791	-	84	38.333	ENSLBEG00000008746	RAB41	82	38.333
ENSLBEG00000005791	-	69	40.645	ENSLBEG00000018063	-	64	40.645
ENSLBEG00000005791	-	56	44.538	ENSLBEG00000027819	rab34b	59	44.538
ENSLBEG00000005791	-	86	33.668	ENSLBEG00000015149	-	92	33.668
ENSLBEG00000005791	-	76	35.583	ENSLBEG00000001905	hrasb	86	35.583
ENSLBEG00000005791	-	75	50.311	ENSLBEG00000019428	rab18b	79	50.311
ENSLBEG00000005791	-	76	34.320	ENSLBEG00000018812	RAB29	84	35.185
ENSLBEG00000005791	-	81	39.247	ENSLBEG00000014427	rab33a	83	39.247
ENSLBEG00000005791	-	70	32.237	ENSLBEG00000000119	rras2	81	32.927
ENSLBEG00000005791	-	98	38.249	ENSLBEG00000002926	si:dkey-34d22.5	98	38.249
ENSLBEG00000005791	-	79	43.860	ENSLBEG00000001313	RAB39B	80	43.860
ENSLBEG00000005791	-	99	41.706	ENSLBEG00000005981	-	96	41.706
ENSLBEG00000005791	-	92	75.635	ENSLBEG00000028426	RAB1A	98	75.635
ENSLBEG00000005791	-	74	45.732	ENSLBEG00000025798	zgc:101559	70	45.732
ENSLBEG00000005791	-	92	75.127	ENSLBEG00000021040	rab1ba	98	75.127
ENSLBEG00000005791	-	81	42.938	ENSLBEG00000022630	-	83	42.938
ENSLBEG00000005791	-	80	32.571	ENSLBEG00000027691	RAB17	76	32.571
ENSLBEG00000005791	-	72	36.025	ENSLBEG00000003644	rabl2	68	36.025
ENSLBEG00000005791	-	94	51.244	ENSLBEG00000026779	rab13	100	51.244
ENSLBEG00000005791	-	79	42.857	ENSLBEG00000026777	rab33ba	76	42.857
ENSLBEG00000005791	-	79	49.112	ENSLBEG00000026989	RAB15	79	49.112
ENSLBEG00000005791	-	72	39.375	ENSLBEG00000020582	rab9a	79	39.375
ENSLBEG00000005791	-	77	37.714	ENSLBEG00000005018	rab32b	81	37.714
ENSLBEG00000005791	-	76	37.195	ENSLBEG00000028450	kras	96	35.519
ENSLBEG00000005791	-	84	31.868	ENSLBEG00000014885	rheb	93	31.868
ENSLBEG00000005791	-	75	64.198	ENSLBEG00000001618	rab35b	80	64.198
ENSLBEG00000005791	-	88	32.124	ENSLBEG00000027628	si:cabz01085950.1	92	32.124
ENSLBEG00000005791	-	76	44.172	ENSLBEG00000010408	-	85	42.553
ENSLBEG00000005791	-	76	34.356	ENSLBEG00000003132	rras	81	34.356
ENSLBEG00000005791	-	77	40.828	ENSLBEG00000001796	RAB7A	82	40.828
ENSLBEG00000005791	-	90	41.089	ENSLBEG00000019435	rab14	93	41.089
ENSLBEG00000005791	-	80	52.023	ENSLBEG00000026857	rab11a	80	52.023
ENSLBEG00000005791	-	98	40.476	ENSLBEG00000002367	rab25a	95	40.476
ENSLBEG00000005791	-	80	42.775	ENSLBEG00000027539	-	77	42.775
ENSLBEG00000005791	-	58	30.827	ENSLBEG00000004752	arfrp1	65	30.827
ENSLBEG00000005791	-	81	44.253	ENSLBEG00000002516	rab5aa	77	44.253
ENSLBEG00000005791	-	98	99.512	ENSLBEG00000027226	-	89	99.512
ENSLBEG00000005791	-	75	38.323	ENSLBEG00000011478	rab9b	76	38.323
ENSLBEG00000005791	-	86	40.394	ENSLBEG00000026790	-	94	40.394
ENSLBEG00000005791	-	79	49.704	ENSLBEG00000020796	rab2a	94	47.753
ENSLBEG00000005791	-	76	34.320	ENSLBEG00000006152	-	84	35.119
ENSLBEG00000005791	-	80	45.349	ENSLBEG00000013756	rab12	71	45.349
ENSLBEG00000005791	-	91	37.500	ENSLBEG00000003748	rab6a	92	37.500
ENSLBEG00000005791	-	80	39.884	ENSLBEG00000019372	rab6bb	79	39.884
ENSLBEG00000005791	-	77	59.639	ENSLBEG00000007681	si:dkey-16l2.16	79	59.639
ENSLBEG00000005791	-	75	50.932	ENSLBEG00000005861	rab18a	76	50.932
ENSLBEG00000005791	-	80	39.306	ENSLBEG00000026930	rab6ba	79	39.306
ENSLBEG00000005791	-	80	42.775	ENSLBEG00000001193	rab42a	80	42.775
ENSLBEG00000005791	-	58	30.081	ENSLBEG00000025929	arl3	67	30.081

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000005791	-	100	91.589	ENSAPOG00000004980	-	100	91.589	Acanthochromis_polyacanthus
ENSLBEG00000005791	-	100	90.654	ENSACIG00000009006	zgc:171927	100	90.654	Amphilophus_citrinellus
ENSLBEG00000005791	-	100	90.654	ENSAOCG00000024149	-	100	90.654	Amphiprion_ocellaris
ENSLBEG00000005791	-	65	95.588	ENSAOCG00000013808	-	93	97.521	Amphiprion_ocellaris
ENSLBEG00000005791	-	100	91.121	ENSAPEG00000022171	zgc:171927	99	91.121	Amphiprion_percula
ENSLBEG00000005791	-	100	91.121	ENSATEG00000003430	zgc:171927	100	91.121	Anabas_testudineus
ENSLBEG00000005791	-	100	91.121	ENSACLG00000013734	-	100	91.121	Astatotilapia_calliptera
ENSLBEG00000005791	-	100	78.605	ENSAMXG00000039486	zgc:171927	100	78.605	Astyanax_mexicanus
ENSLBEG00000005791	-	100	87.850	ENSCSEG00000014416	zgc:171927	100	87.850	Cynoglossus_semilaevis
ENSLBEG00000005791	-	100	89.720	ENSCVAG00000009222	zgc:171927	100	89.720	Cyprinodon_variegatus
ENSLBEG00000005791	-	100	78.140	ENSDARG00000033056	zgc:171927	100	78.140	Danio_rerio
ENSLBEG00000005791	-	100	79.630	ENSELUG00000011680	zgc:171927	100	79.630	Esox_lucius
ENSLBEG00000005791	-	100	89.720	ENSFHEG00000022176	zgc:171927	100	89.720	Fundulus_heteroclitus
ENSLBEG00000005791	-	98	78.199	ENSGMOG00000004979	-	97	78.199	Gadus_morhua
ENSLBEG00000005791	-	98	89.474	ENSGAFG00000015702	zgc:171927	84	89.474	Gambusia_affinis
ENSLBEG00000005791	-	100	91.121	ENSGACG00000013401	zgc:171927	99	91.121	Gasterosteus_aculeatus
ENSLBEG00000005791	-	100	91.121	ENSHBUG00000002397	-	100	91.121	Haplochromis_burtoni
ENSLBEG00000005791	-	100	90.654	ENSKMAG00000009856	zgc:171927	100	90.654	Kryptolebias_marmoratus
ENSLBEG00000005791	-	98	73.810	ENSLOCG00000014692	zgc:171927	96	73.810	Lepisosteus_oculatus
ENSLBEG00000005791	-	100	88.785	ENSMAMG00000020135	zgc:171927	100	88.785	Mastacembelus_armatus
ENSLBEG00000005791	-	100	91.121	ENSMZEG00005024685	-	100	91.121	Maylandia_zebra
ENSLBEG00000005791	-	100	85.514	ENSMMOG00000009833	-	100	85.514	Mola_mola
ENSLBEG00000005791	-	100	86.916	ENSMALG00000021129	zgc:171927	100	86.916	Monopterus_albus
ENSLBEG00000005791	-	100	90.654	ENSNBRG00000006202	zgc:171927	100	90.654	Neolamprologus_brichardi
ENSLBEG00000005791	-	100	88.318	ENSORLG00000000602	zgc:171927	100	88.318	Oryzias_latipes
ENSLBEG00000005791	-	100	88.318	ENSORLG00020021071	zgc:171927	100	88.318	Oryzias_latipes_hni
ENSLBEG00000005791	-	100	88.785	ENSORLG00015010098	zgc:171927	100	88.785	Oryzias_latipes_hsok
ENSLBEG00000005791	-	100	89.252	ENSOMEG00000020594	zgc:171927	100	89.252	Oryzias_melastigma
ENSLBEG00000005791	-	100	91.121	ENSPFOG00000013810	zgc:171927	99	91.121	Poecilia_formosa
ENSLBEG00000005791	-	100	90.187	ENSPLAG00000005869	zgc:171927	100	90.187	Poecilia_latipinna
ENSLBEG00000005791	-	100	91.121	ENSPMEG00000022350	zgc:171927	100	91.121	Poecilia_mexicana
ENSLBEG00000005791	-	100	91.121	ENSPREG00000017517	zgc:171927	100	91.121	Poecilia_reticulata
ENSLBEG00000005791	-	100	91.121	ENSPNYG00000007520	-	100	91.121	Pundamilia_nyererei
ENSLBEG00000005791	-	100	79.070	ENSPNAG00000029574	zgc:171927	100	79.070	Pygocentrus_nattereri
ENSLBEG00000005791	-	100	77.674	ENSSFOG00015005464	zgc:171927	99	77.674	Scleropages_formosus
ENSLBEG00000005791	-	100	88.318	ENSSMAG00000004416	-	100	88.318	Scophthalmus_maximus
ENSLBEG00000005791	-	100	91.589	ENSSDUG00000004445	zgc:171927	100	91.589	Seriola_dumerili
ENSLBEG00000005791	-	100	91.589	ENSSLDG00000018024	zgc:171927	100	91.589	Seriola_lalandi_dorsalis
ENSLBEG00000005791	-	100	92.523	ENSSPAG00000013533	zgc:171927	100	92.523	Stegastes_partitus
ENSLBEG00000005791	-	100	91.121	ENSXCOG00000010695	zgc:171927	100	91.121	Xiphophorus_couchianus
ENSLBEG00000005791	-	100	90.654	ENSXMAG00000004683	zgc:171927	100	90.654	Xiphophorus_maculatus