EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000005861 (Gene tree)
Gene ID: 109981979
Gene Symbol: rab18a
Alias: fc62e07|wu:fc62e07|zgc:77145
Full Name: RAB18%2C member RAS oncogene family
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 12992 bases
Position: chrFKLU01000038.1:1117181-1130172
Accession: 109981979
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000007590	MMR_HSR1	PF01926.23	1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000008000	-	480	-	ENSLBEP00000007608	159 (aa)	-	-
ENSLBET00000007982	-	2219	XM_020631001	ENSLBEP00000007590	213 (aa)	XP_020486657	-

Gene Model

Click here to download ENSLBEG00000005861's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000005861's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000005861	rab18a	75	43.478	ENSLBEG00000002367	rab25a	75	43.478
ENSLBEG00000005861	rab18a	81	45.087	ENSLBEG00000007681	si:dkey-16l2.16	82	44.571
ENSLBEG00000005861	rab18a	74	30.247	ENSLBEG00000019137	rhebl1	81	30.247
ENSLBEG00000005861	rab18a	80	50.867	ENSLBEG00000001146	rab30	84	50.867
ENSLBEG00000005861	rab18a	80	39.181	ENSLBEG00000008746	RAB41	79	39.181
ENSLBEG00000005861	rab18a	76	45.679	ENSLBEG00000026857	rab11a	75	45.679
ENSLBEG00000005861	rab18a	85	31.522	ENSLBEG00000028450	kras	97	31.522
ENSLBEG00000005861	rab18a	76	38.554	ENSLBEG00000005128	-	74	38.554
ENSLBEG00000005861	rab18a	76	31.928	ENSLBEG00000028391	dnajc27	61	31.928
ENSLBEG00000005861	rab18a	89	38.265	ENSLBEG00000014427	rab33a	88	38.265
ENSLBEG00000005861	rab18a	85	34.759	ENSLBEG00000005018	rab32b	88	34.759
ENSLBEG00000005861	rab18a	76	36.747	ENSLBEG00000020582	rab9a	82	36.747
ENSLBEG00000005861	rab18a	77	41.212	ENSLBEG00000003235	rab22a	85	41.212
ENSLBEG00000005861	rab18a	86	41.176	ENSLBEG00000002516	rab5aa	82	41.176
ENSLBEG00000005861	rab18a	84	34.066	ENSLBEG00000003644	rabl2	80	34.066
ENSLBEG00000005861	rab18a	78	44.643	ENSLBEG00000013463	rab15	77	44.643
ENSLBEG00000005861	rab18a	84	48.370	ENSLBEG00000020796	rab2a	97	47.368
ENSLBEG00000005861	rab18a	76	30.488	ENSLBEG00000027628	si:cabz01085950.1	81	30.488
ENSLBEG00000005861	rab18a	70	36.000	ENSLBEG00000000119	rras2	82	35.542
ENSLBEG00000005861	rab18a	77	48.171	ENSLBEG00000019435	rab14	76	48.171
ENSLBEG00000005861	rab18a	77	37.725	ENSLBEG00000017798	-	81	37.725
ENSLBEG00000005861	rab18a	77	40.719	ENSLBEG00000002926	si:dkey-34d22.5	76	40.719
ENSLBEG00000005861	rab18a	80	35.260	ENSLBEG00000025705	si:ch73-116o1.2	83	35.260
ENSLBEG00000005861	rab18a	80	39.766	ENSLBEG00000019372	rab6bb	80	39.766
ENSLBEG00000005861	rab18a	91	46.429	ENSLBEG00000027781	rab1ab	96	46.429
ENSLBEG00000005861	rab18a	76	47.561	ENSLBEG00000013756	rab12	67	47.561
ENSLBEG00000005861	rab18a	81	47.701	ENSLBEG00000001618	rab35b	86	47.701
ENSLBEG00000005861	rab18a	91	30.653	ENSLBEG00000006152	-	97	30.653
ENSLBEG00000005861	rab18a	76	46.914	ENSLBEG00000015248	rab11bb	74	46.914
ENSLBEG00000005861	rab18a	89	45.641	ENSLBEG00000028426	RAB1A	96	45.641
ENSLBEG00000005861	rab18a	73	30.189	ENSLBEG00000018738	-	56	30.189
ENSLBEG00000005861	rab18a	76	50.932	ENSLBEG00000005791	-	75	50.932
ENSLBEG00000005861	rab18a	81	37.500	ENSLBEG00000018180	si:dkey-13a21.4	84	37.500
ENSLBEG00000005861	rab18a	74	32.099	ENSLBEG00000014885	rheb	85	32.099
ENSLBEG00000005861	rab18a	77	46.341	ENSLBEG00000026790	-	76	46.341
ENSLBEG00000005861	rab18a	55	31.933	ENSLBEG00000011152	arl4d	59	31.933
ENSLBEG00000005861	rab18a	81	33.523	ENSLBEG00000026006	rab34a	66	33.523
ENSLBEG00000005861	rab18a	76	50.932	ENSLBEG00000027226	-	68	50.932
ENSLBEG00000005861	rab18a	77	37.725	ENSLBEG00000001796	RAB7A	81	37.725
ENSLBEG00000005861	rab18a	77	44.242	ENSLBEG00000004128	rab5c	91	40.796
ENSLBEG00000005861	rab18a	76	43.210	ENSLBEG00000005981	-	64	52.427
ENSLBEG00000005861	rab18a	84	39.106	ENSLBEG00000003748	rab6a	84	39.106
ENSLBEG00000005861	rab18a	80	42.614	ENSLBEG00000027539	-	80	42.614
ENSLBEG00000005861	rab18a	78	50.299	ENSLBEG00000021040	rab1ba	83	50.299
ENSLBEG00000005861	rab18a	85	43.478	ENSLBEG00000003101	rab4a	86	43.478
ENSLBEG00000005861	rab18a	54	37.931	ENSLBEG00000027819	rab34b	58	37.931
ENSLBEG00000005861	rab18a	76	46.296	ENSLBEG00000004172	-	74	46.296
ENSLBEG00000005861	rab18a	78	35.882	ENSLBEG00000027691	RAB17	73	35.882
ENSLBEG00000005861	rab18a	80	37.356	ENSLBEG00000013176	rab23	75	37.821
ENSLBEG00000005861	rab18a	91	30.653	ENSLBEG00000018812	RAB29	97	30.653
ENSLBEG00000005861	rab18a	76	36.747	ENSLBEG00000011478	rab9b	76	36.747
ENSLBEG00000005861	rab18a	79	43.195	ENSLBEG00000016417	rab11al	79	43.373
ENSLBEG00000005861	rab18a	87	42.781	ENSLBEG00000016446	rab25b	89	42.781
ENSLBEG00000005861	rab18a	68	42.857	ENSLBEG00000025798	zgc:101559	63	42.857
ENSLBEG00000005861	rab18a	78	32.530	ENSLBEG00000001905	hrasb	87	32.530
ENSLBEG00000005861	rab18a	92	36.364	ENSLBEG00000026930	rab6ba	95	36.364
ENSLBEG00000005861	rab18a	80	39.535	ENSLBEG00000022630	-	81	39.535
ENSLBEG00000005861	rab18a	79	44.379	ENSLBEG00000006087	rab11ba	74	45.679
ENSLBEG00000005861	rab18a	82	33.714	ENSLBEG00000003132	rras	91	34.409
ENSLBEG00000005861	rab18a	91	37.209	ENSLBEG00000026777	rab33ba	88	37.209
ENSLBEG00000005861	rab18a	85	44.324	ENSLBEG00000026779	rab13	90	44.324
ENSLBEG00000005861	rab18a	77	44.242	ENSLBEG00000010408	-	75	44.242
ENSLBEG00000005861	rab18a	80	38.953	ENSLBEG00000001313	RAB39B	81	38.953
ENSLBEG00000005861	rab18a	69	42.484	ENSLBEG00000018063	-	63	42.484
ENSLBEG00000005861	rab18a	77	40.606	ENSLBEG00000001193	rab42a	76	40.606
ENSLBEG00000005861	rab18a	95	83.333	ENSLBEG00000019428	rab18b	99	83.333
ENSLBEG00000005861	rab18a	79	43.787	ENSLBEG00000026989	RAB15	78	43.787

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000005861	rab18a	95	97.537	ENSAPOG00000010760	rab18a	99	97.537	Acanthochromis_polyacanthus
ENSLBEG00000005861	rab18a	95	85.222	ENSACIG00000009617	rab18a	99	85.222	Amphilophus_citrinellus
ENSLBEG00000005861	rab18a	95	98.030	ENSAOCG00000016233	rab18a	99	98.030	Amphiprion_ocellaris
ENSLBEG00000005861	rab18a	95	98.030	ENSAPEG00000005392	rab18a	99	98.030	Amphiprion_percula
ENSLBEG00000005861	rab18a	95	97.537	ENSATEG00000021911	rab18a	99	97.537	Anabas_testudineus
ENSLBEG00000005861	rab18a	95	87.255	ENSACAG00000005463	-	99	87.255	Anolis_carolinensis
ENSLBEG00000005861	rab18a	95	97.537	ENSACLG00000011484	rab18a	99	97.537	Astatotilapia_calliptera
ENSLBEG00000005861	rab18a	95	85.854	ENSCPBG00000015839	-	99	85.854	Chrysemys_picta_bellii
ENSLBEG00000005861	rab18a	92	70.647	ENSCPBG00000027619	-	98	70.647	Chrysemys_picta_bellii
ENSLBEG00000005861	rab18a	93	74.372	ENSCING00000006838	-	99	74.372	Ciona_intestinalis
ENSLBEG00000005861	rab18a	93	73.869	ENSCSAVG00000010348	-	99	73.869	Ciona_savignyi
ENSLBEG00000005861	rab18a	95	96.059	ENSCSEG00000011816	rab18a	99	96.059	Cynoglossus_semilaevis
ENSLBEG00000005861	rab18a	90	94.792	ENSCVAG00000015451	rab18a	99	94.581	Cyprinodon_variegatus
ENSLBEG00000005861	rab18a	95	82.353	ENSDARG00000055291	rab18a	99	82.353	Danio_rerio
ENSLBEG00000005861	rab18a	95	92.647	ENSELUG00000003805	rab18a	99	92.647	Esox_lucius
ENSLBEG00000005861	rab18a	95	96.059	ENSFHEG00000019455	rab18a	99	96.059	Fundulus_heteroclitus
ENSLBEG00000005861	rab18a	90	95.288	ENSGAFG00000002790	rab18a	99	94.581	Gambusia_affinis
ENSLBEG00000005861	rab18a	95	85.854	ENSGAGG00000015642	-	99	85.854	Gopherus_agassizii
ENSLBEG00000005861	rab18a	95	97.537	ENSHBUG00000001518	rab18a	99	97.537	Haplochromis_burtoni
ENSLBEG00000005861	rab18a	89	88.947	ENSLACG00000009310	rab18a	99	87.317	Latimeria_chalumnae
ENSLBEG00000005861	rab18a	95	89.216	ENSLOCG00000007491	rab18a	99	89.216	Lepisosteus_oculatus
ENSLBEG00000005861	rab18a	95	95.567	ENSMAMG00000014320	rab18a	99	95.567	Mastacembelus_armatus
ENSLBEG00000005861	rab18a	95	97.044	ENSMZEG00005017235	rab18a	99	97.044	Maylandia_zebra
ENSLBEG00000005861	rab18a	95	98.030	ENSMALG00000009813	rab18a	99	98.030	Monopterus_albus
ENSLBEG00000005861	rab18a	95	97.537	ENSNBRG00000013507	rab18a	99	97.537	Neolamprologus_brichardi
ENSLBEG00000005861	rab18a	90	95.312	ENSORLG00000004624	rab18a	99	95.074	Oryzias_latipes
ENSLBEG00000005861	rab18a	90	95.833	ENSORLG00020008333	rab18a	99	95.567	Oryzias_latipes_hni
ENSLBEG00000005861	rab18a	90	95.833	ENSORLG00015004739	rab18a	99	95.567	Oryzias_latipes_hsok
ENSLBEG00000005861	rab18a	90	95.288	ENSOMEG00000020605	rab18a	99	95.074	Oryzias_melastigma
ENSLBEG00000005861	rab18a	95	88.725	ENSPKIG00000009825	rab18a	99	88.725	Paramormyrops_kingsleyae
ENSLBEG00000005861	rab18a	95	95.074	ENSPMGG00000020409	-	99	95.074	Periophthalmus_magnuspinnatus
ENSLBEG00000005861	rab18a	90	95.812	ENSPFOG00000007571	rab18a	99	95.074	Poecilia_formosa
ENSLBEG00000005861	rab18a	90	95.812	ENSPLAG00000010104	rab18a	99	95.074	Poecilia_latipinna
ENSLBEG00000005861	rab18a	90	95.812	ENSPMEG00000013085	rab18a	99	95.074	Poecilia_mexicana
ENSLBEG00000005861	rab18a	90	95.812	ENSPREG00000005923	rab18a	83	95.074	Poecilia_reticulata
ENSLBEG00000005861	rab18a	95	97.537	ENSPNYG00000007064	rab18a	99	97.537	Pundamilia_nyererei
ENSLBEG00000005861	rab18a	94	81.095	ENSPNAG00000011548	rab18a	100	81.095	Pygocentrus_nattereri
ENSLBEG00000005861	rab18a	95	91.176	ENSSFOG00015017444	rab18a	84	91.176	Scleropages_formosus
ENSLBEG00000005861	rab18a	90	95.337	ENSSMAG00000002969	rab18a	99	95.098	Scophthalmus_maximus
ENSLBEG00000005861	rab18a	95	97.537	ENSSDUG00000003823	rab18a	99	97.537	Seriola_dumerili
ENSLBEG00000005861	rab18a	95	97.537	ENSSLDG00000006977	rab18a	99	97.537	Seriola_lalandi_dorsalis
ENSLBEG00000005861	rab18a	89	89.418	ENSSPUG00000017677	-	99	87.317	Sphenodon_punctatus
ENSLBEG00000005861	rab18a	95	94.581	ENSTRUG00000004984	rab18a	99	94.581	Takifugu_rubripes
ENSLBEG00000005861	rab18a	95	88.293	ENSUMAG00000015574	-	99	88.293	Ursus_maritimus
ENSLBEG00000005861	rab18a	95	87.805	ENSXETG00000004556	rab18	99	88.293	Xenopus_tropicalis
ENSLBEG00000005861	rab18a	90	95.812	ENSXMAG00000024122	rab18a	99	95.074	Xiphophorus_maculatus