EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000005885 (Gene tree)
Gene ID: 110002386
Gene Symbol: polr2j
Alias: rpb11|zgc:110005
Full Name: RNA polymerase II subunit J
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 3487 bases
Position: chrFKLU01000946.1:57712-61198
Accession: 110002386
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000007623	RNA_pol_L_2	PF13656.6	4.3e-29	1	1
ENSLBEP00000007623	RNA_pol_L	PF01193.24	1.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000008015	-	704	XM_020657987	ENSLBEP00000007623	117 (aa)	XP_020513643	UPI00054C3CDC

Gene Model

Click here to download ENSLBEG00000005885's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000005885's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000005885	polr2j	89	31.776	ENSLBEG00000015919	polr1d	94	31.776

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000005885	polr2j	91	92.523	ENSG00000228049	POLR2J2	94	89.908	Homo_sapiens
ENSLBEG00000005885	polr2j	100	94.872	ENSG00000005075	POLR2J	100	94.872	Homo_sapiens
ENSLBEG00000005885	polr2j	100	99.145	ENSAPOG00000019538	polr2j	100	99.145	Acanthochromis_polyacanthus
ENSLBEG00000005885	polr2j	100	87.402	ENSAMEG00000015480	-	100	87.402	Ailuropoda_melanoleuca
ENSLBEG00000005885	polr2j	93	76.364	ENSACIG00000014549	POLR2J2	91	76.364	Amphilophus_citrinellus
ENSLBEG00000005885	polr2j	100	98.291	ENSAOCG00000006937	polr2j	100	98.291	Amphiprion_ocellaris
ENSLBEG00000005885	polr2j	100	99.145	ENSAPEG00000021761	polr2j	100	99.145	Amphiprion_percula
ENSLBEG00000005885	polr2j	100	99.145	ENSATEG00000013312	-	100	99.145	Anabas_testudineus
ENSLBEG00000005885	polr2j	100	99.145	ENSATEG00000009731	polr2j	100	99.145	Anabas_testudineus
ENSLBEG00000005885	polr2j	86	92.079	ENSAPLG00000003744	-	100	92.079	Anas_platyrhynchos
ENSLBEG00000005885	polr2j	100	87.179	ENSACAG00000000251	POLR2J	100	87.179	Anolis_carolinensis
ENSLBEG00000005885	polr2j	100	99.145	ENSACLG00000014564	polr2j	100	99.145	Astatotilapia_calliptera
ENSLBEG00000005885	polr2j	100	98.291	ENSAMXG00000007517	polr2j	100	98.291	Astyanax_mexicanus
ENSLBEG00000005885	polr2j	62	63.014	ENSBTAG00000048046	-	61	63.014	Bos_taurus
ENSLBEG00000005885	polr2j	94	68.182	WBGene00012187	rpb-11	89	68.182	Caenorhabditis_elegans
ENSLBEG00000005885	polr2j	100	94.872	ENSCJAG00000016203	-	100	94.872	Callithrix_jacchus
ENSLBEG00000005885	polr2j	100	94.872	ENSCAFG00000013683	-	100	94.872	Canis_familiaris
ENSLBEG00000005885	polr2j	85	93.939	ENSTSYG00000029243	-	85	93.939	Carlito_syrichta
ENSLBEG00000005885	polr2j	100	94.872	ENSCPOG00000001401	-	100	94.872	Cavia_porcellus
ENSLBEG00000005885	polr2j	100	73.504	ENSCATG00000016595	-	97	85.870	Cercocebus_atys
ENSLBEG00000005885	polr2j	100	94.872	ENSCLAG00000005238	-	100	94.872	Chinchilla_lanigera
ENSLBEG00000005885	polr2j	100	94.872	ENSCSAG00000018092	-	100	94.872	Chlorocebus_sabaeus
ENSLBEG00000005885	polr2j	100	82.906	ENSCING00000020531	-	100	82.906	Ciona_intestinalis
ENSLBEG00000005885	polr2j	100	81.197	ENSCSAVG00000006948	-	100	81.197	Ciona_savignyi
ENSLBEG00000005885	polr2j	100	94.872	ENSCGRG00001012814	Polr2j	100	94.872	Cricetulus_griseus_chok1gshd
ENSLBEG00000005885	polr2j	100	80.342	ENSCGRG00000008433	Polr2j	100	80.342	Cricetulus_griseus_crigri
ENSLBEG00000005885	polr2j	100	96.581	ENSCSEG00000020352	polr2j	100	96.581	Cynoglossus_semilaevis
ENSLBEG00000005885	polr2j	100	98.291	ENSCVAG00000014267	polr2j	100	98.291	Cyprinodon_variegatus
ENSLBEG00000005885	polr2j	100	97.436	ENSDARG00000035146	polr2j	100	97.436	Danio_rerio
ENSLBEG00000005885	polr2j	100	94.872	ENSDORG00000005934	Polr2j	100	94.872	Dipodomys_ordii
ENSLBEG00000005885	polr2j	98	79.130	FBgn0032634	Rpb11	98	79.130	Drosophila_melanogaster
ENSLBEG00000005885	polr2j	100	64.957	ENSEBUG00000016100	polr2j	100	64.957	Eptatretus_burgeri
ENSLBEG00000005885	polr2j	100	94.872	ENSEASG00005016864	-	100	94.872	Equus_asinus_asinus
ENSLBEG00000005885	polr2j	100	97.436	ENSELUG00000012822	polr2j	100	97.436	Esox_lucius
ENSLBEG00000005885	polr2j	100	94.872	ENSFCAG00000000377	-	100	94.872	Felis_catus
ENSLBEG00000005885	polr2j	100	94.872	ENSFALG00000009523	POLR2J	100	94.872	Ficedula_albicollis
ENSLBEG00000005885	polr2j	100	94.872	ENSFDAG00000010507	-	100	94.872	Fukomys_damarensis
ENSLBEG00000005885	polr2j	100	99.145	ENSFHEG00000006625	polr2j	100	99.145	Fundulus_heteroclitus
ENSLBEG00000005885	polr2j	100	98.291	ENSGMOG00000018207	polr2j	100	98.291	Gadus_morhua
ENSLBEG00000005885	polr2j	100	94.872	ENSGALG00000030808	-	100	94.872	Gallus_gallus
ENSLBEG00000005885	polr2j	100	99.145	ENSGAFG00000019555	polr2j	100	99.145	Gambusia_affinis
ENSLBEG00000005885	polr2j	100	99.145	ENSGACG00000003310	polr2j	100	99.145	Gasterosteus_aculeatus
ENSLBEG00000005885	polr2j	97	84.956	ENSGAGG00000018304	-	96	84.956	Gopherus_agassizii
ENSLBEG00000005885	polr2j	85	89.000	ENSGGOG00000004519	-	80	89.000	Gorilla_gorilla
ENSLBEG00000005885	polr2j	100	99.145	ENSHBUG00000008467	polr2j	100	99.145	Haplochromis_burtoni
ENSLBEG00000005885	polr2j	100	94.872	ENSHGLG00000013598	POLR2J	100	94.872	Heterocephalus_glaber_female
ENSLBEG00000005885	polr2j	100	94.872	ENSHGLG00100011242	POLR2J	100	94.872	Heterocephalus_glaber_male
ENSLBEG00000005885	polr2j	100	98.291	ENSHCOG00000014827	polr2j	68	98.291	Hippocampus_comes
ENSLBEG00000005885	polr2j	100	98.291	ENSIPUG00000023960	polr2j	100	98.291	Ictalurus_punctatus
ENSLBEG00000005885	polr2j	100	94.872	ENSSTOG00000006377	POLR2J	100	94.872	Ictidomys_tridecemlineatus
ENSLBEG00000005885	polr2j	100	89.744	ENSJJAG00000018834	-	100	89.744	Jaculus_jaculus
ENSLBEG00000005885	polr2j	100	94.872	ENSJJAG00000013854	-	100	94.872	Jaculus_jaculus
ENSLBEG00000005885	polr2j	100	99.145	ENSKMAG00000014581	polr2j	79	99.145	Kryptolebias_marmoratus
ENSLBEG00000005885	polr2j	100	98.291	ENSLOCG00000001885	polr2j	89	98.291	Lepisosteus_oculatus
ENSLBEG00000005885	polr2j	100	94.872	ENSLAFG00000021507	-	100	94.872	Loxodonta_africana
ENSLBEG00000005885	polr2j	100	85.385	ENSMMUG00000012019	POLR2J	100	85.385	Macaca_mulatta
ENSLBEG00000005885	polr2j	100	100.000	ENSMAMG00000009374	polr2j	100	100.000	Mastacembelus_armatus
ENSLBEG00000005885	polr2j	100	99.145	ENSMZEG00005011932	polr2j	100	99.145	Maylandia_zebra
ENSLBEG00000005885	polr2j	100	94.872	ENSMGAG00000003534	POLR2J	100	94.872	Meleagris_gallopavo
ENSLBEG00000005885	polr2j	100	94.872	ENSMAUG00000013049	Polr2j	100	94.872	Mesocricetus_auratus
ENSLBEG00000005885	polr2j	80	89.362	ENSMICG00000026811	-	94	89.362	Microcebus_murinus
ENSLBEG00000005885	polr2j	100	94.872	ENSMOCG00000001294	Polr2j	100	94.872	Microtus_ochrogaster
ENSLBEG00000005885	polr2j	100	99.145	ENSMMOG00000013265	polr2j	100	99.145	Mola_mola
ENSLBEG00000005885	polr2j	100	86.719	ENSMODG00000013617	-	100	86.719	Monodelphis_domestica
ENSLBEG00000005885	polr2j	100	100.000	ENSMALG00000020749	polr2j	100	100.000	Monopterus_albus
ENSLBEG00000005885	polr2j	100	94.872	MGP_CAROLIEiJ_G0027851	Polr2j	100	94.872	Mus_caroli
ENSLBEG00000005885	polr2j	100	94.872	ENSMUSG00000039771	Polr2j	100	94.872	Mus_musculus
ENSLBEG00000005885	polr2j	100	94.872	MGP_PahariEiJ_G0024434	Polr2j	100	94.872	Mus_pahari
ENSLBEG00000005885	polr2j	100	94.872	MGP_SPRETEiJ_G0028853	Polr2j	100	94.872	Mus_spretus
ENSLBEG00000005885	polr2j	100	94.872	ENSMLUG00000010467	POLR2J	100	94.872	Myotis_lucifugus
ENSLBEG00000005885	polr2j	100	94.872	ENSNGAG00000023412	Polr2j	100	94.872	Nannospalax_galili
ENSLBEG00000005885	polr2j	66	96.104	ENSNBRG00000006580	polr2j	59	96.104	Neolamprologus_brichardi
ENSLBEG00000005885	polr2j	100	94.872	ENSODEG00000015648	-	100	94.872	Octodon_degus
ENSLBEG00000005885	polr2j	100	73.504	ENSODEG00000008559	-	100	73.504	Octodon_degus
ENSLBEG00000005885	polr2j	100	99.145	ENSONIG00000000259	polr2j	100	99.145	Oreochromis_niloticus
ENSLBEG00000005885	polr2j	100	92.308	ENSOANG00000020912	POLR2J	100	92.308	Ornithorhynchus_anatinus
ENSLBEG00000005885	polr2j	100	87.402	ENSOCUG00000023609	POLR2J	100	87.402	Oryctolagus_cuniculus
ENSLBEG00000005885	polr2j	100	99.145	ENSORLG00000029046	polr2j	83	99.145	Oryzias_latipes
ENSLBEG00000005885	polr2j	100	99.145	ENSORLG00020007625	polr2j	83	99.145	Oryzias_latipes_hni
ENSLBEG00000005885	polr2j	100	99.145	ENSORLG00015003457	polr2j	83	99.145	Oryzias_latipes_hsok
ENSLBEG00000005885	polr2j	100	98.291	ENSOMEG00000002097	polr2j	100	98.291	Oryzias_melastigma
ENSLBEG00000005885	polr2j	100	71.875	ENSOGAG00000008250	-	100	71.875	Otolemur_garnettii
ENSLBEG00000005885	polr2j	100	94.872	ENSOARG00000014204	-	98	94.872	Ovis_aries
ENSLBEG00000005885	polr2j	100	94.872	ENSPPRG00000012439	-	100	94.872	Panthera_pardus
ENSLBEG00000005885	polr2j	97	85.965	ENSPTIG00000018714	-	100	91.262	Panthera_tigris_altaica
ENSLBEG00000005885	polr2j	85	93.000	ENSPSIG00000010173	-	100	93.000	Pelodiscus_sinensis
ENSLBEG00000005885	polr2j	100	99.145	ENSPMGG00000021256	polr2j	100	99.145	Periophthalmus_magnuspinnatus
ENSLBEG00000005885	polr2j	100	94.872	ENSPEMG00000015733	Polr2j	100	94.872	Peromyscus_maniculatus_bairdii
ENSLBEG00000005885	polr2j	100	94.872	ENSPCIG00000009026	-	100	94.872	Phascolarctos_cinereus
ENSLBEG00000005885	polr2j	100	99.145	ENSPFOG00000012001	polr2j	99	99.145	Poecilia_formosa
ENSLBEG00000005885	polr2j	100	99.145	ENSPLAG00000014075	polr2j	100	99.145	Poecilia_latipinna
ENSLBEG00000005885	polr2j	100	99.145	ENSPMEG00000020585	polr2j	100	99.145	Poecilia_mexicana
ENSLBEG00000005885	polr2j	100	99.145	ENSPREG00000015255	polr2j	100	99.145	Poecilia_reticulata
ENSLBEG00000005885	polr2j	100	94.872	ENSPCOG00000024573	-	100	94.872	Propithecus_coquereli
ENSLBEG00000005885	polr2j	99	88.793	ENSPVAG00000017770	-	66	88.793	Pteropus_vampyrus
ENSLBEG00000005885	polr2j	100	99.145	ENSPNYG00000014832	polr2j	100	99.145	Pundamilia_nyererei
ENSLBEG00000005885	polr2j	100	95.726	ENSPNAG00000016595	polr2j	100	95.726	Pygocentrus_nattereri
ENSLBEG00000005885	polr2j	100	94.872	ENSRNOG00000001430	Polr2j	100	94.872	Rattus_norvegicus
ENSLBEG00000005885	polr2j	100	94.872	ENSSBOG00000025579	-	100	94.872	Saimiri_boliviensis_boliviensis
ENSLBEG00000005885	polr2j	59	98.551	ENSSHAG00000010443	-	81	98.551	Sarcophilus_harrisii
ENSLBEG00000005885	polr2j	93	95.413	ENSSFOG00015003371	polr2j	83	95.413	Scleropages_formosus
ENSLBEG00000005885	polr2j	100	99.145	ENSSMAG00000006729	polr2j	100	99.145	Scophthalmus_maximus
ENSLBEG00000005885	polr2j	100	99.145	ENSSDUG00000018490	polr2j	100	99.145	Seriola_dumerili
ENSLBEG00000005885	polr2j	100	99.145	ENSSLDG00000022354	polr2j	100	99.145	Seriola_lalandi_dorsalis
ENSLBEG00000005885	polr2j	100	94.872	ENSSPUG00000010802	-	100	94.872	Sphenodon_punctatus
ENSLBEG00000005885	polr2j	100	99.145	ENSSPAG00000021953	polr2j	100	99.145	Stegastes_partitus
ENSLBEG00000005885	polr2j	100	78.632	ENSSSCG00000003703	-	83	78.632	Sus_scrofa
ENSLBEG00000005885	polr2j	100	94.872	ENSSSCG00000007688	-	100	94.872	Sus_scrofa
ENSLBEG00000005885	polr2j	59	98.551	ENSTGUG00000004510	-	100	98.551	Taeniopygia_guttata
ENSLBEG00000005885	polr2j	85	93.000	ENSTGUG00000004501	-	100	93.000	Taeniopygia_guttata
ENSLBEG00000005885	polr2j	100	99.145	ENSTRUG00000020842	polr2j	100	99.145	Takifugu_rubripes
ENSLBEG00000005885	polr2j	100	98.291	ENSTNIG00000002994	polr2j	100	98.291	Tetraodon_nigroviridis
ENSLBEG00000005885	polr2j	91	79.439	ENSTBEG00000005797	-	70	79.439	Tupaia_belangeri
ENSLBEG00000005885	polr2j	100	94.872	ENSUAMG00000011310	-	100	94.872	Ursus_americanus
ENSLBEG00000005885	polr2j	100	94.872	ENSUMAG00000012594	-	100	94.872	Ursus_maritimus
ENSLBEG00000005885	polr2j	100	94.872	ENSXETG00000001108	polr2j	100	94.872	Xenopus_tropicalis
ENSLBEG00000005885	polr2j	100	99.145	ENSXMAG00000012422	polr2j	100	99.145	Xiphophorus_maculatus