EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000005911 (Gene tree)
Gene ID: 109976854
Gene Symbol: -
Alias: -
Full Name: protein FAM46A-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 10534 bases
Position: chrFKLU01004694.1:4657-15190
Accession: 109976854
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000007644	NTP_transf_7	PF07984.12	1.9e-156	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000008036	-	2165	XM_020626830	ENSLBEP00000007644	393 (aa)	XP_020482486	UPI0009B3758A

Gene Model

Click here to download ENSLBEG00000005911's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000005911's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000005911	-	97	73.298	ENSLBEG00000003696	TENT5A	98	71.756
ENSLBEG00000005911	-	100	84.010	ENSLBEG00000007247	tent5ba	100	84.010
ENSLBEG00000005911	-	100	100.000	ENSLBEG00000001602	tent5bb	100	100.000
ENSLBEG00000005911	-	99	69.975	ENSLBEG00000007634	tent5ab	98	69.975
ENSLBEG00000005911	-	93	61.475	ENSLBEG00000004564	tent5d	94	61.475

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000005911	-	100	94.148	ENSAPOG00000013301	tent5bb	100	94.148	Acanthochromis_polyacanthus
ENSLBEG00000005911	-	99	82.908	ENSAPOG00000001189	tent5ba	99	82.908	Acanthochromis_polyacanthus
ENSLBEG00000005911	-	100	92.875	ENSACIG00000020894	tent5bb	100	92.875	Amphilophus_citrinellus
ENSLBEG00000005911	-	68	84.015	ENSACIG00000010290	tent5ba	90	84.015	Amphilophus_citrinellus
ENSLBEG00000005911	-	100	94.148	ENSAOCG00000021898	tent5bb	100	94.148	Amphiprion_ocellaris
ENSLBEG00000005911	-	99	82.908	ENSAOCG00000018686	tent5ba	99	82.908	Amphiprion_ocellaris
ENSLBEG00000005911	-	100	93.893	ENSAPEG00000004406	tent5bb	100	93.893	Amphiprion_percula
ENSLBEG00000005911	-	99	82.908	ENSAPEG00000018735	tent5ba	99	82.908	Amphiprion_percula
ENSLBEG00000005911	-	100	92.875	ENSATEG00000009686	tent5bb	100	92.875	Anabas_testudineus
ENSLBEG00000005911	-	100	84.010	ENSATEG00000023735	tent5ba	100	84.010	Anabas_testudineus
ENSLBEG00000005911	-	98	84.021	ENSACLG00000012695	tent5ba	99	84.021	Astatotilapia_calliptera
ENSLBEG00000005911	-	100	93.384	ENSACLG00000009811	tent5bb	100	93.384	Astatotilapia_calliptera
ENSLBEG00000005911	-	100	81.425	ENSAMXG00000037518	tent5ba	100	81.425	Astyanax_mexicanus
ENSLBEG00000005911	-	99	88.265	ENSAMXG00000032411	tent5bb	99	88.265	Astyanax_mexicanus
ENSLBEG00000005911	-	100	82.785	ENSCSEG00000005309	tent5ba	100	82.785	Cynoglossus_semilaevis
ENSLBEG00000005911	-	87	83.673	ENSCVAG00000020190	tent5ba	86	83.673	Cyprinodon_variegatus
ENSLBEG00000005911	-	100	90.076	ENSCVAG00000013534	tent5bb	100	90.076	Cyprinodon_variegatus
ENSLBEG00000005911	-	100	82.188	ENSDARG00000039943	tent5ba	100	82.188	Danio_rerio
ENSLBEG00000005911	-	100	84.987	ENSDARG00000011797	tent5bb	100	84.987	Danio_rerio
ENSLBEG00000005911	-	100	84.887	ENSELUG00000011161	tent5bb	100	84.887	Esox_lucius
ENSLBEG00000005911	-	99	80.563	ENSELUG00000022605	tent5ba	98	80.563	Esox_lucius
ENSLBEG00000005911	-	99	83.033	ENSFHEG00000015561	tent5ba	99	83.033	Fundulus_heteroclitus
ENSLBEG00000005911	-	100	91.349	ENSFHEG00000005285	tent5bb	100	91.349	Fundulus_heteroclitus
ENSLBEG00000005911	-	100	89.340	ENSGMOG00000018930	tent5bb	99	89.340	Gadus_morhua
ENSLBEG00000005911	-	87	79.651	ENSGMOG00000019728	-	100	79.651	Gadus_morhua
ENSLBEG00000005911	-	98	83.979	ENSGAFG00000002722	tent5ba	99	83.979	Gambusia_affinis
ENSLBEG00000005911	-	100	91.349	ENSGAFG00000000761	tent5bb	100	91.349	Gambusia_affinis
ENSLBEG00000005911	-	100	82.741	ENSGACG00000007269	tent5ba	96	83.827	Gasterosteus_aculeatus
ENSLBEG00000005911	-	100	91.349	ENSGACG00000007689	tent5bb	99	91.349	Gasterosteus_aculeatus
ENSLBEG00000005911	-	99	93.367	ENSHBUG00000010176	tent5bb	99	93.367	Haplochromis_burtoni
ENSLBEG00000005911	-	98	84.021	ENSHBUG00000020683	tent5ba	99	84.021	Haplochromis_burtoni
ENSLBEG00000005911	-	100	81.218	ENSHCOG00000005840	tent5ba	100	81.218	Hippocampus_comes
ENSLBEG00000005911	-	99	82.143	ENSIPUG00000016887	fam46b	99	82.143	Ictalurus_punctatus
ENSLBEG00000005911	-	99	81.378	ENSIPUG00000010747	FAM46A	99	81.378	Ictalurus_punctatus
ENSLBEG00000005911	-	100	90.585	ENSKMAG00000012836	tent5bb	100	90.585	Kryptolebias_marmoratus
ENSLBEG00000005911	-	100	81.980	ENSKMAG00000013207	tent5ba	100	81.980	Kryptolebias_marmoratus
ENSLBEG00000005911	-	100	81.679	ENSLOCG00000003743	tent5bb	100	81.679	Lepisosteus_oculatus
ENSLBEG00000005911	-	100	83.249	ENSMAMG00000023970	tent5ba	100	83.249	Mastacembelus_armatus
ENSLBEG00000005911	-	100	93.384	ENSMAMG00000002667	tent5bb	86	93.384	Mastacembelus_armatus
ENSLBEG00000005911	-	98	84.021	ENSMZEG00005019712	tent5ba	99	84.021	Maylandia_zebra
ENSLBEG00000005911	-	100	93.384	ENSMZEG00005016765	tent5bb	100	93.384	Maylandia_zebra
ENSLBEG00000005911	-	100	92.875	ENSMMOG00000014403	tent5bb	100	92.875	Mola_mola
ENSLBEG00000005911	-	98	83.117	ENSMMOG00000008974	tent5ba	99	83.117	Mola_mola
ENSLBEG00000005911	-	100	82.995	ENSMALG00000007424	tent5ba	100	82.995	Monopterus_albus
ENSLBEG00000005911	-	100	90.585	ENSMALG00000016702	tent5bb	100	90.585	Monopterus_albus
ENSLBEG00000005911	-	98	84.021	ENSNBRG00000000536	tent5ba	99	84.021	Neolamprologus_brichardi
ENSLBEG00000005911	-	100	93.384	ENSNBRG00000021689	tent5bb	100	93.384	Neolamprologus_brichardi
ENSLBEG00000005911	-	98	84.278	ENSONIG00000006760	tent5ba	99	84.278	Oreochromis_niloticus
ENSLBEG00000005911	-	100	93.639	ENSONIG00000007603	tent5bb	100	93.639	Oreochromis_niloticus
ENSLBEG00000005911	-	98	83.247	ENSORLG00000028579	tent5ba	99	83.247	Oryzias_latipes
ENSLBEG00000005911	-	100	91.858	ENSORLG00000020877	tent5bb	97	91.858	Oryzias_latipes
ENSLBEG00000005911	-	100	91.858	ENSORLG00020020448	tent5bb	97	91.858	Oryzias_latipes_hni
ENSLBEG00000005911	-	99	82.609	ENSORLG00020022604	tent5ba	100	82.609	Oryzias_latipes_hni
ENSLBEG00000005911	-	100	91.603	ENSORLG00015008671	tent5bb	97	91.603	Oryzias_latipes_hsok
ENSLBEG00000005911	-	98	83.247	ENSORLG00015008860	tent5ba	99	83.247	Oryzias_latipes_hsok
ENSLBEG00000005911	-	99	84.319	ENSOMEG00000010794	tent5ba	99	84.319	Oryzias_melastigma
ENSLBEG00000005911	-	100	80.407	ENSPKIG00000013826	-	100	80.407	Paramormyrops_kingsleyae
ENSLBEG00000005911	-	100	84.224	ENSPKIG00000020331	-	100	84.224	Paramormyrops_kingsleyae
ENSLBEG00000005911	-	100	82.487	ENSPMGG00000001810	tent5ba	100	82.487	Periophthalmus_magnuspinnatus
ENSLBEG00000005911	-	98	90.104	ENSPMGG00000016426	tent5bb	98	90.104	Periophthalmus_magnuspinnatus
ENSLBEG00000005911	-	100	90.585	ENSPFOG00000002816	tent5bb	100	90.585	Poecilia_formosa
ENSLBEG00000005911	-	98	84.238	ENSPFOG00000009565	tent5ba	99	84.238	Poecilia_formosa
ENSLBEG00000005911	-	95	84.759	ENSPLAG00000002262	tent5ba	90	84.759	Poecilia_latipinna
ENSLBEG00000005911	-	98	91.169	ENSPLAG00000008840	tent5bb	99	91.169	Poecilia_latipinna
ENSLBEG00000005911	-	100	90.840	ENSPMEG00000012300	tent5bb	100	90.840	Poecilia_mexicana
ENSLBEG00000005911	-	98	84.238	ENSPMEG00000010433	tent5ba	99	84.238	Poecilia_mexicana
ENSLBEG00000005911	-	97	84.474	ENSPREG00000014751	tent5bb	76	84.474	Poecilia_reticulata
ENSLBEG00000005911	-	98	83.979	ENSPREG00000008620	tent5ba	99	83.979	Poecilia_reticulata
ENSLBEG00000005911	-	98	84.021	ENSPNYG00000005263	tent5ba	99	84.021	Pundamilia_nyererei
ENSLBEG00000005911	-	100	93.130	ENSPNYG00000005829	tent5bb	100	93.130	Pundamilia_nyererei
ENSLBEG00000005911	-	98	88.083	ENSPNAG00000025421	tent5bb	96	87.724	Pygocentrus_nattereri
ENSLBEG00000005911	-	100	82.952	ENSPNAG00000022093	tent5ba	100	82.952	Pygocentrus_nattereri
ENSLBEG00000005911	-	100	81.934	ENSSFOG00015022222	tent5bb	100	81.934	Scleropages_formosus
ENSLBEG00000005911	-	100	83.503	ENSSMAG00000002009	tent5ba	100	83.503	Scophthalmus_maximus
ENSLBEG00000005911	-	100	90.331	ENSSMAG00000020437	tent5bb	88	89.235	Scophthalmus_maximus
ENSLBEG00000005911	-	100	94.402	ENSSDUG00000001461	tent5bb	100	94.402	Seriola_dumerili
ENSLBEG00000005911	-	100	84.010	ENSSDUG00000017177	tent5ba	100	84.010	Seriola_dumerili
ENSLBEG00000005911	-	100	94.402	ENSSLDG00000020016	tent5bb	100	94.402	Seriola_lalandi_dorsalis
ENSLBEG00000005911	-	100	84.010	ENSSLDG00000016410	tent5ba	100	84.010	Seriola_lalandi_dorsalis
ENSLBEG00000005911	-	100	95.420	ENSSPAG00000006276	tent5bb	86	95.420	Stegastes_partitus
ENSLBEG00000005911	-	99	83.163	ENSSPAG00000012949	tent5ba	99	83.163	Stegastes_partitus
ENSLBEG00000005911	-	100	91.858	ENSTRUG00000010330	tent5bb	100	91.858	Takifugu_rubripes
ENSLBEG00000005911	-	100	84.010	ENSTRUG00000019516	tent5ba	100	84.010	Takifugu_rubripes
ENSLBEG00000005911	-	100	82.443	ENSTNIG00000009661	tent5ba	99	82.443	Tetraodon_nigroviridis
ENSLBEG00000005911	-	100	85.751	ENSTNIG00000014035	tent5bb	99	85.751	Tetraodon_nigroviridis
ENSLBEG00000005911	-	98	84.156	ENSXCOG00000016124	tent5ba	99	84.156	Xiphophorus_couchianus
ENSLBEG00000005911	-	87	90.909	ENSXCOG00000007280	tent5bb	93	90.909	Xiphophorus_couchianus
ENSLBEG00000005911	-	98	83.979	ENSXMAG00000010694	tent5ba	99	83.979	Xiphophorus_maculatus
ENSLBEG00000005911	-	100	90.840	ENSXMAG00000022155	tent5bb	100	90.840	Xiphophorus_maculatus