EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000005937 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: protein strawberry notch homolog 2-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 7558 bases
Position: chrFKLU01004695.1:5213-12770
Accession: 109976855
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000007737	ResIII	PF04851.15	7.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000008129	-	1905	XM_020626832	ENSLBEP00000007737	634 (aa)	XP_020482488	-

Gene Model

Click here to download ENSLBEG00000005937's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000005937's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000005937	-	100	90.090	ENSLBEG00000025016	si:ch73-63e15.2	63	87.902

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000005937	-	100	85.628	ENSAOCG00000016581	si:ch73-63e15.2	63	81.448	Amphiprion_ocellaris
ENSLBEG00000005937	-	100	85.152	ENSATEG00000023838	si:ch73-63e15.2	62	82.083	Anabas_testudineus
ENSLBEG00000005937	-	100	68.256	ENSAPLG00000007158	SBNO2	51	67.362	Anas_platyrhynchos
ENSLBEG00000005937	-	67	81.647	ENSACAG00000006370	-	92	81.647	Anolis_carolinensis
ENSLBEG00000005937	-	99	62.913	ENSANAG00000026685	SBNO2	50	63.182	Aotus_nancymaae
ENSLBEG00000005937	-	100	71.684	ENSAMXG00000018868	sbno2a	64	71.810	Astyanax_mexicanus
ENSLBEG00000005937	-	99	63.927	ENSCAPG00000005731	SBNO2	53	63.318	Cavia_aperea
ENSLBEG00000005937	-	99	62.985	ENSCCAG00000037518	SBNO2	50	63.253	Cebus_capucinus
ENSLBEG00000005937	-	99	64.679	ENSCLAG00000010178	SBNO2	55	63.678	Chinchilla_lanigera
ENSLBEG00000005937	-	100	68.161	ENSCPBG00000008920	SBNO2	56	67.115	Chrysemys_picta_bellii
ENSLBEG00000005937	-	99	62.874	ENSCANG00000036745	SBNO2	56	62.575	Colobus_angolensis_palliatus
ENSLBEG00000005937	-	100	77.321	ENSCSEG00000006856	si:ch73-63e15.2	50	77.169	Cynoglossus_semilaevis
ENSLBEG00000005937	-	99	63.733	ENSFDAG00000015186	SBNO2	50	63.429	Fukomys_damarensis
ENSLBEG00000005937	-	100	80.858	ENSGMOG00000007542	si:ch73-63e15.2	52	80.858	Gadus_morhua
ENSLBEG00000005937	-	100	81.667	ENSGAFG00000004860	si:ch73-63e15.2	50	81.053	Gambusia_affinis
ENSLBEG00000005937	-	100	84.187	ENSGACG00000013190	si:ch73-63e15.2	54	84.488	Gasterosteus_aculeatus
ENSLBEG00000005937	-	99	63.581	ENSHGLG00100005269	SBNO2	55	62.443	Heterocephalus_glaber_male
ENSLBEG00000005937	-	99	73.780	ENSIPUG00000019672	sbno2	62	72.973	Ictalurus_punctatus
ENSLBEG00000005937	-	99	67.678	ENSLACG00000012598	SBNO2	95	69.697	Latimeria_chalumnae
ENSLBEG00000005937	-	99	62.908	ENSLAFG00000008824	SBNO2	52	62.801	Loxodonta_africana
ENSLBEG00000005937	-	99	61.353	ENSMFAG00000040030	SBNO2	50	60.902	Macaca_fascicularis
ENSLBEG00000005937	-	99	63.636	ENSMLEG00000038556	SBNO2	55	63.333	Mandrillus_leucophaeus
ENSLBEG00000005937	-	100	67.313	ENSMGAG00000003801	SBNO2	51	67.164	Meleagris_gallopavo
ENSLBEG00000005937	-	100	71.822	ENSMALG00000021831	si:ch73-63e15.2	61	71.669	Monopterus_albus
ENSLBEG00000005937	-	99	64.340	ENSMUSG00000035673	Sbno2	94	59.886	Mus_musculus
ENSLBEG00000005937	-	99	64.545	MGP_SPRETEiJ_G0016381	Sbno2	51	63.485	Mus_spretus
ENSLBEG00000005937	-	99	63.718	ENSMPUG00000008747	SBNO2	59	63.118	Mustela_putorius_furo
ENSLBEG00000005937	-	100	80.635	ENSNBRG00000022968	si:ch73-63e15.2	61	84.248	Neolamprologus_brichardi
ENSLBEG00000005937	-	99	56.259	ENSNLEG00000001305	SBNO2	52	56.315	Nomascus_leucogenys
ENSLBEG00000005937	-	99	63.247	ENSOPRG00000017238	SBNO2	52	61.970	Ochotona_princeps
ENSLBEG00000005937	-	100	82.273	ENSONIG00000002490	si:ch73-63e15.2	51	81.259	Oreochromis_niloticus
ENSLBEG00000005937	-	99	62.913	ENSPPAG00000032482	SBNO2	50	63.182	Pan_paniscus
ENSLBEG00000005937	-	100	67.953	ENSPSIG00000002852	SBNO2	67	67.809	Pelodiscus_sinensis
ENSLBEG00000005937	-	100	81.970	ENSPFOG00000004096	si:ch73-63e15.2	56	79.160	Poecilia_formosa
ENSLBEG00000005937	-	100	81.818	ENSPMEG00000002129	si:ch73-63e15.2	60	79.818	Poecilia_mexicana
ENSLBEG00000005937	-	99	58.772	ENSPCOG00000015216	SBNO2	50	58.407	Propithecus_coquereli
ENSLBEG00000005937	-	99	72.617	ENSPNAG00000026609	sbno2a	56	78.053	Pygocentrus_nattereri
ENSLBEG00000005937	-	99	64.545	ENSRNOG00000013987	Sbno2	50	63.636	Rattus_norvegicus
ENSLBEG00000005937	-	99	61.584	ENSRBIG00000009740	SBNO2	52	60.987	Rhinopithecus_bieti
ENSLBEG00000005937	-	99	63.788	ENSRROG00000044671	SBNO2	54	63.485	Rhinopithecus_roxellana
ENSLBEG00000005937	-	99	62.763	ENSSBOG00000023562	SBNO2	50	63.030	Saimiri_boliviensis_boliviensis
ENSLBEG00000005937	-	100	64.583	ENSSHAG00000010241	SBNO2	56	64.812	Sarcophilus_harrisii
ENSLBEG00000005937	-	97	77.778	ENSSFOG00015005861	si:ch73-63e15.2	50	77.484	Scleropages_formosus
ENSLBEG00000005937	-	99	63.868	ENSSSCG00000030042	SBNO2	50	63.118	Sus_scrofa
ENSLBEG00000005937	-	81	86.441	ENSTNIG00000000856	si:ch73-63e15.2	93	87.824	Tetraodon_nigroviridis
ENSLBEG00000005937	-	99	64.168	ENSUAMG00000006568	SBNO2	86	61.527	Ursus_americanus
ENSLBEG00000005937	-	100	79.358	ENSXCOG00000009209	si:ch73-63e15.2	60	80.472	Xiphophorus_couchianus