EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000006015 (Gene tree)
Gene ID: 109987729
Gene Symbol: safb
Alias: wu:fb40a03|wu:fd42g06|zgc:55387
Full Name: scaffold attachment factor B2-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 10846 bases
Position: chrFKLU01000123.1:812623-823468
Accession: 109987729
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000007769	RRM_5	PF13893.6	1.7e-06	1	1
ENSLBEP00000007769	RRM_1	PF00076.22	1.3e-13	1	1
ENSLBEP00000007769	SAP	PF02037.27	3.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000008163	-	4348	XM_020638915	ENSLBEP00000007769	839 (aa)	XP_020494571	UPI0009B2EDAB

Gene Model

Click here to download ENSLBEG00000006015's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000006015's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000006015	safb	65	44.481	ENSG00000160633	SAFB	78	63.115	Homo_sapiens
ENSLBEG00000006015	safb	100	81.161	ENSAPOG00000022508	safb	100	81.517	Acanthochromis_polyacanthus
ENSLBEG00000006015	safb	65	44.246	ENSAMEG00000012254	SAFB	98	41.251	Ailuropoda_melanoleuca
ENSLBEG00000006015	safb	100	71.311	ENSACIG00000006247	safb	100	71.783	Amphilophus_citrinellus
ENSLBEG00000006015	safb	95	80.025	ENSAOCG00000006308	safb	100	80.149	Amphiprion_ocellaris
ENSLBEG00000006015	safb	100	80.569	ENSAPEG00000023342	safb	100	80.924	Amphiprion_percula
ENSLBEG00000006015	safb	100	81.818	ENSATEG00000004998	safb	100	82.054	Anabas_testudineus
ENSLBEG00000006015	safb	59	42.408	ENSAPLG00000005780	-	98	44.556	Anas_platyrhynchos
ENSLBEG00000006015	safb	59	45.338	ENSAPLG00000006355	-	99	48.772	Anas_platyrhynchos
ENSLBEG00000006015	safb	52	56.432	ENSACAG00000016893	-	96	42.323	Anolis_carolinensis
ENSLBEG00000006015	safb	65	45.381	ENSANAG00000028821	SAFB	95	41.985	Aotus_nancymaae
ENSLBEG00000006015	safb	100	76.061	ENSACLG00000001926	safb	100	76.415	Astatotilapia_calliptera
ENSLBEG00000006015	safb	98	60.000	ENSAMXG00000018154	safb	100	60.738	Astyanax_mexicanus
ENSLBEG00000006015	safb	95	44.333	ENSBTAG00000007875	SAFB	95	41.722	Bos_taurus
ENSLBEG00000006015	safb	65	45.219	ENSCAFG00000018803	SAFB	83	42.378	Canis_familiaris
ENSLBEG00000006015	safb	65	45.146	ENSCAFG00020018943	SAFB	97	42.246	Canis_lupus_dingo
ENSLBEG00000006015	safb	95	44.667	ENSCHIG00000007262	SAFB	95	42.018	Capra_hircus
ENSLBEG00000006015	safb	65	44.984	ENSCCAG00000020193	SAFB	95	41.793	Cebus_capucinus
ENSLBEG00000006015	safb	65	44.318	ENSCATG00000029994	SAFB	95	41.622	Cercocebus_atys
ENSLBEG00000006015	safb	63	41.626	ENSCLAG00000007734	SAFB	95	42.691	Chinchilla_lanigera
ENSLBEG00000006015	safb	65	44.318	ENSCSAG00000009949	SAFB	95	41.622	Chlorocebus_sabaeus
ENSLBEG00000006015	safb	59	33.569	ENSCHOG00000003208	SAFB	87	36.789	Choloepus_hoffmanni
ENSLBEG00000006015	safb	92	47.065	ENSCPBG00000010936	-	98	47.677	Chrysemys_picta_bellii
ENSLBEG00000006015	safb	92	41.818	ENSCPBG00000010928	-	98	44.229	Chrysemys_picta_bellii
ENSLBEG00000006015	safb	67	43.458	ENSCANG00000004774	-	63	65.217	Colobus_angolensis_palliatus
ENSLBEG00000006015	safb	98	42.394	ENSCANG00000019754	-	93	41.676	Colobus_angolensis_palliatus
ENSLBEG00000006015	safb	63	42.165	ENSCGRG00001002254	Safb	95	39.958	Cricetulus_griseus_chok1gshd
ENSLBEG00000006015	safb	52	39.006	ENSCGRG00000011529	Safb	89	37.690	Cricetulus_griseus_crigri
ENSLBEG00000006015	safb	64	66.111	ENSCSEG00000019870	safb	100	66.507	Cynoglossus_semilaevis
ENSLBEG00000006015	safb	100	64.455	ENSCVAG00000002226	safb	100	64.929	Cyprinodon_variegatus
ENSLBEG00000006015	safb	96	60.603	ENSDARG00000020467	safb	98	61.442	Danio_rerio
ENSLBEG00000006015	safb	65	43.689	ENSDNOG00000015746	SAFB	95	40.603	Dasypus_novemcinctus
ENSLBEG00000006015	safb	63	43.137	ENSDORG00000016200	Safb	95	39.117	Dipodomys_ordii
ENSLBEG00000006015	safb	63	44.426	ENSEASG00005023019	SAFB	97	42.476	Equus_asinus_asinus
ENSLBEG00000006015	safb	63	45.017	ENSECAG00000018659	SAFB	87	41.774	Equus_caballus
ENSLBEG00000006015	safb	99	62.572	ENSELUG00000022327	safb	99	62.828	Esox_lucius
ENSLBEG00000006015	safb	65	44.426	ENSFCAG00000011835	SAFB	97	41.453	Felis_catus
ENSLBEG00000006015	safb	56	41.667	ENSFALG00000013881	-	97	45.679	Ficedula_albicollis
ENSLBEG00000006015	safb	63	45.559	ENSFALG00000013882	-	87	46.278	Ficedula_albicollis
ENSLBEG00000006015	safb	78	45.333	ENSFDAG00000020306	SAFB	74	43.301	Fukomys_damarensis
ENSLBEG00000006015	safb	100	66.232	ENSFHEG00000004219	safb	100	66.943	Fundulus_heteroclitus
ENSLBEG00000006015	safb	65	43.954	ENSGALG00000013365	-	97	45.445	Gallus_gallus
ENSLBEG00000006015	safb	63	44.462	ENSGALG00000001948	-	97	46.736	Gallus_gallus
ENSLBEG00000006015	safb	100	64.692	ENSGAFG00000016162	safb	100	64.692	Gambusia_affinis
ENSLBEG00000006015	safb	100	75.465	ENSGACG00000011385	safb	100	75.463	Gasterosteus_aculeatus
ENSLBEG00000006015	safb	95	50.055	ENSGAGG00000008424	-	97	50.109	Gopherus_agassizii
ENSLBEG00000006015	safb	65	44.643	ENSGGOG00000015109	SAFB	95	41.838	Gorilla_gorilla
ENSLBEG00000006015	safb	100	65.680	ENSHBUG00000009218	safb	100	69.421	Haplochromis_burtoni
ENSLBEG00000006015	safb	63	42.251	ENSHGLG00000015883	SAFB	95	40.446	Heterocephalus_glaber_female
ENSLBEG00000006015	safb	63	42.251	ENSHGLG00100004228	SAFB	70	43.350	Heterocephalus_glaber_male
ENSLBEG00000006015	safb	94	63.106	ENSHCOG00000001705	safb	99	64.045	Hippocampus_comes
ENSLBEG00000006015	safb	99	61.324	ENSIPUG00000024869	safb2	100	61.451	Ictalurus_punctatus
ENSLBEG00000006015	safb	59	40.625	ENSSTOG00000002783	SAFB	98	38.724	Ictidomys_tridecemlineatus
ENSLBEG00000006015	safb	63	41.408	ENSJJAG00000009021	Safb	96	40.486	Jaculus_jaculus
ENSLBEG00000006015	safb	100	74.586	ENSKMAG00000022308	safb	100	74.823	Kryptolebias_marmoratus
ENSLBEG00000006015	safb	65	43.730	ENSLACG00000018090	SAFB	98	49.143	Latimeria_chalumnae
ENSLBEG00000006015	safb	98	64.005	ENSLOCG00000003613	safb	99	64.236	Lepisosteus_oculatus
ENSLBEG00000006015	safb	63	44.572	ENSLAFG00000003840	SAFB	96	42.473	Loxodonta_africana
ENSLBEG00000006015	safb	65	44.084	ENSMFAG00000003885	SAFB	95	41.730	Macaca_fascicularis
ENSLBEG00000006015	safb	65	44.925	ENSMMUG00000017970	SAFB	95	41.812	Macaca_mulatta
ENSLBEG00000006015	safb	65	42.079	ENSMNEG00000035637	SAFB	95	40.479	Macaca_nemestrina
ENSLBEG00000006015	safb	64	40.558	ENSMLEG00000038637	SAFB	95	39.978	Mandrillus_leucophaeus
ENSLBEG00000006015	safb	100	82.130	ENSMAMG00000003357	safb	91	82.130	Mastacembelus_armatus
ENSLBEG00000006015	safb	100	79.176	ENSMZEG00005009120	safb	100	79.647	Maylandia_zebra
ENSLBEG00000006015	safb	97	41.469	ENSMGAG00000001101	-	98	43.689	Meleagris_gallopavo
ENSLBEG00000006015	safb	63	44.300	ENSMGAG00000001051	-	96	47.971	Meleagris_gallopavo
ENSLBEG00000006015	safb	65	44.951	ENSMICG00000008739	-	97	42.049	Microcebus_murinus
ENSLBEG00000006015	safb	86	39.413	ENSMICG00000046795	-	66	69.231	Microcebus_murinus
ENSLBEG00000006015	safb	65	43.899	ENSMODG00000001236	SAFB	95	42.206	Monodelphis_domestica
ENSLBEG00000006015	safb	100	80.841	ENSMALG00000020330	safb	100	80.841	Monopterus_albus
ENSLBEG00000006015	safb	65	43.780	ENSMPUG00000006123	SAFB	91	41.622	Mustela_putorius_furo
ENSLBEG00000006015	safb	98	44.130	ENSMLUG00000001081	SAFB	95	42.174	Myotis_lucifugus
ENSLBEG00000006015	safb	65	44.481	ENSNLEG00000013551	SAFB	97	42.152	Nomascus_leucogenys
ENSLBEG00000006015	safb	59	42.342	ENSOPRG00000011561	-	100	39.787	Ochotona_princeps
ENSLBEG00000006015	safb	100	78.731	ENSONIG00000002318	safb	100	79.083	Oreochromis_niloticus
ENSLBEG00000006015	safb	86	39.903	ENSOCUG00000014628	SAFB	61	42.136	Oryctolagus_cuniculus
ENSLBEG00000006015	safb	98	72.443	ENSORLG00000016989	safb	100	72.235	Oryzias_latipes
ENSLBEG00000006015	safb	66	68.280	ENSORLG00020000404	safb	100	65.371	Oryzias_latipes_hni
ENSLBEG00000006015	safb	98	73.165	ENSORLG00015010733	safb	100	73.113	Oryzias_latipes_hsok
ENSLBEG00000006015	safb	100	73.168	ENSOMEG00000009066	safb	100	73.168	Oryzias_melastigma
ENSLBEG00000006015	safb	63	45.333	ENSOGAG00000027769	SAFB	97	42.688	Otolemur_garnettii
ENSLBEG00000006015	safb	82	39.477	ENSOARG00000007856	-	100	39.816	Ovis_aries
ENSLBEG00000006015	safb	95	40.601	ENSOARG00000007662	-	95	39.956	Ovis_aries
ENSLBEG00000006015	safb	65	45.066	ENSPPAG00000035129	SAFB	95	41.838	Pan_paniscus
ENSLBEG00000006015	safb	65	44.426	ENSPPRG00000017197	SAFB	97	41.453	Panthera_pardus
ENSLBEG00000006015	safb	65	44.895	ENSPTRG00000010335	SAFB	95	41.838	Pan_troglodytes
ENSLBEG00000006015	safb	65	43.760	ENSPANG00000007770	SAFB	95	41.730	Papio_anubis
ENSLBEG00000006015	safb	99	63.134	ENSPKIG00000009902	safb	99	63.235	Paramormyrops_kingsleyae
ENSLBEG00000006015	safb	98	46.455	ENSPSIG00000009367	-	96	46.292	Pelodiscus_sinensis
ENSLBEG00000006015	safb	98	48.243	ENSPSIG00000011679	-	98	48.948	Pelodiscus_sinensis
ENSLBEG00000006015	safb	100	67.059	ENSPFOG00000007745	safb	100	67.176	Poecilia_formosa
ENSLBEG00000006015	safb	100	64.447	ENSPLAG00000001614	safb	100	64.334	Poecilia_latipinna
ENSLBEG00000006015	safb	100	66.941	ENSPMEG00000021023	safb	100	67.059	Poecilia_mexicana
ENSLBEG00000006015	safb	100	65.394	ENSPREG00000012496	safb	100	65.509	Poecilia_reticulata
ENSLBEG00000006015	safb	65	44.481	ENSPPYG00000009428	SAFB	95	41.712	Pongo_abelii
ENSLBEG00000006015	safb	63	38.898	ENSPCAG00000006475	SAFB	95	39.048	Procavia_capensis
ENSLBEG00000006015	safb	95	41.307	ENSPCOG00000014090	SAFB	97	40.278	Propithecus_coquereli
ENSLBEG00000006015	safb	95	41.982	ENSPVAG00000004913	SAFB	97	38.996	Pteropus_vampyrus
ENSLBEG00000006015	safb	99	60.702	ENSPNAG00000021838	safb	98	62.704	Pygocentrus_nattereri
ENSLBEG00000006015	safb	65	44.274	ENSRBIG00000042509	SAFB	95	42.369	Rhinopithecus_bieti
ENSLBEG00000006015	safb	65	44.246	ENSRROG00000029278	SAFB	95	41.838	Rhinopithecus_roxellana
ENSLBEG00000006015	safb	65	45.219	ENSSBOG00000026291	SAFB	95	41.685	Saimiri_boliviensis_boliviensis
ENSLBEG00000006015	safb	99	62.571	ENSSFOG00015008156	safb	99	62.783	Scleropages_formosus
ENSLBEG00000006015	safb	100	81.915	ENSSMAG00000009316	safb	100	82.151	Scophthalmus_maximus
ENSLBEG00000006015	safb	100	77.988	ENSSDUG00000009652	safb	100	78.107	Seriola_dumerili
ENSLBEG00000006015	safb	100	83.195	ENSSLDG00000001670	safb	100	83.432	Seriola_lalandi_dorsalis
ENSLBEG00000006015	safb	59	42.986	ENSSARG00000010475	SAFB	98	39.209	Sorex_araneus
ENSLBEG00000006015	safb	56	41.698	ENSSPUG00000009747	-	98	41.636	Sphenodon_punctatus
ENSLBEG00000006015	safb	51	43.048	ENSSPUG00000009820	-	99	46.739	Sphenodon_punctatus
ENSLBEG00000006015	safb	99	70.937	ENSSPAG00000015682	safb	99	72.242	Stegastes_partitus
ENSLBEG00000006015	safb	63	44.741	ENSSSCG00000013522	SAFB	96	43.939	Sus_scrofa
ENSLBEG00000006015	safb	63	44.538	ENSTGUG00000000489	-	96	49.367	Taeniopygia_guttata
ENSLBEG00000006015	safb	63	44.850	ENSTGUG00000000502	-	97	46.681	Taeniopygia_guttata
ENSLBEG00000006015	safb	100	75.118	ENSTRUG00000003567	safb	100	75.118	Takifugu_rubripes
ENSLBEG00000006015	safb	91	63.196	ENSTNIG00000015470	safb	100	61.772	Tetraodon_nigroviridis
ENSLBEG00000006015	safb	81	77.778	ENSTTRG00000013588	SAFB	82	77.778	Tursiops_truncatus
ENSLBEG00000006015	safb	65	44.333	ENSUMAG00000009734	SAFB	87	43.842	Ursus_maritimus
ENSLBEG00000006015	safb	65	45.543	ENSVVUG00000013720	SAFB	83	42.503	Vulpes_vulpes
ENSLBEG00000006015	safb	63	43.543	ENSXETG00000008755	safb	96	45.403	Xenopus_tropicalis
ENSLBEG00000006015	safb	100	67.412	ENSXMAG00000003458	safb	100	67.529	Xiphophorus_maculatus