EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000006021 (Gene tree)
Gene ID: 109995260
Gene Symbol: smfn
Alias: zgc:73191
Full Name: RNA exonuclease 2
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 3641 bases
Position: chrFKLU01000320.1:356916-360556
Accession: 109995260
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000007800	RNase_T	PF00929.24	2.1e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000008195	-	570	XM_020648925	ENSLBEP00000007800	189 (aa)	XP_020504581	-

Gene Model

Click here to download ENSLBEG00000006021's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000006021's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000006021	smfn	100	77.249	ENSG00000076043	REXO2	100	77.249	Homo_sapiens
ENSLBEG00000006021	smfn	60	86.842	ENSAPOG00000011971	smfn	98	86.842	Acanthochromis_polyacanthus
ENSLBEG00000006021	smfn	100	77.778	ENSAMEG00000013263	REXO2	79	77.778	Ailuropoda_melanoleuca
ENSLBEG00000006021	smfn	97	85.870	ENSACIG00000023553	smfn	99	85.870	Amphilophus_citrinellus
ENSLBEG00000006021	smfn	69	87.692	ENSAOCG00000011565	smfn	79	87.692	Amphiprion_ocellaris
ENSLBEG00000006021	smfn	96	87.912	ENSAPEG00000012435	smfn	67	87.912	Amphiprion_percula
ENSLBEG00000006021	smfn	97	85.326	ENSATEG00000015385	smfn	66	85.326	Anabas_testudineus
ENSLBEG00000006021	smfn	96	79.006	ENSAPLG00000005045	REXO2	90	79.006	Anas_platyrhynchos
ENSLBEG00000006021	smfn	92	69.540	ENSACAG00000011631	REXO2	81	69.540	Anolis_carolinensis
ENSLBEG00000006021	smfn	61	63.793	ENSANAG00000027457	-	93	61.314	Aotus_nancymaae
ENSLBEG00000006021	smfn	100	78.307	ENSANAG00000020834	REXO2	79	78.307	Aotus_nancymaae
ENSLBEG00000006021	smfn	99	81.818	ENSACLG00000024566	smfn	98	81.818	Astatotilapia_calliptera
ENSLBEG00000006021	smfn	100	77.778	ENSBTAG00000005843	REXO2	79	77.778	Bos_taurus
ENSLBEG00000006021	smfn	90	50.588	WBGene00007429	C08B6.8	93	58.904	Caenorhabditis_elegans
ENSLBEG00000006021	smfn	100	77.249	ENSCJAG00000012434	REXO2	79	77.249	Callithrix_jacchus
ENSLBEG00000006021	smfn	100	76.720	ENSCAFG00000013511	REXO2	79	76.720	Canis_familiaris
ENSLBEG00000006021	smfn	100	77.778	ENSCAFG00020002513	REXO2	79	77.778	Canis_lupus_dingo
ENSLBEG00000006021	smfn	100	77.778	ENSCHIG00000009264	REXO2	79	77.778	Capra_hircus
ENSLBEG00000006021	smfn	100	77.778	ENSTSYG00000002237	REXO2	79	77.778	Carlito_syrichta
ENSLBEG00000006021	smfn	100	69.312	ENSTSYG00000027948	-	96	69.312	Carlito_syrichta
ENSLBEG00000006021	smfn	100	78.307	ENSCAPG00000006093	REXO2	100	78.307	Cavia_aperea
ENSLBEG00000006021	smfn	100	78.307	ENSCPOG00000010548	REXO2	79	78.307	Cavia_porcellus
ENSLBEG00000006021	smfn	100	78.307	ENSCCAG00000034979	REXO2	79	78.307	Cebus_capucinus
ENSLBEG00000006021	smfn	100	77.249	ENSCATG00000015278	REXO2	79	77.249	Cercocebus_atys
ENSLBEG00000006021	smfn	100	78.307	ENSCLAG00000011195	REXO2	80	78.307	Chinchilla_lanigera
ENSLBEG00000006021	smfn	100	77.249	ENSCSAG00000002754	REXO2	79	77.249	Chlorocebus_sabaeus
ENSLBEG00000006021	smfn	100	76.720	ENSCHOG00000000642	-	79	76.720	Choloepus_hoffmanni
ENSLBEG00000006021	smfn	73	74.638	ENSCPBG00000009359	REXO2	95	74.638	Chrysemys_picta_bellii
ENSLBEG00000006021	smfn	88	57.831	ENSCING00000009858	-	80	57.831	Ciona_intestinalis
ENSLBEG00000006021	smfn	100	77.249	ENSCANG00000034756	REXO2	79	77.249	Colobus_angolensis_palliatus
ENSLBEG00000006021	smfn	100	78.836	ENSCGRG00001019814	-	79	78.836	Cricetulus_griseus_chok1gshd
ENSLBEG00000006021	smfn	100	77.249	ENSCGRG00001010922	-	92	77.249	Cricetulus_griseus_chok1gshd
ENSLBEG00000006021	smfn	96	79.558	ENSCGRG00001013673	-	88	79.558	Cricetulus_griseus_chok1gshd
ENSLBEG00000006021	smfn	100	78.836	ENSCGRG00000006235	Rexo2	79	78.836	Cricetulus_griseus_crigri
ENSLBEG00000006021	smfn	96	84.530	ENSCSEG00000007214	smfn	65	84.530	Cynoglossus_semilaevis
ENSLBEG00000006021	smfn	95	84.444	ENSCVAG00000012008	smfn	97	84.444	Cyprinodon_variegatus
ENSLBEG00000006021	smfn	97	79.348	ENSDARG00000009806	smfn	70	79.348	Danio_rerio
ENSLBEG00000006021	smfn	85	81.250	ENSDNOG00000046533	REXO2	77	81.250	Dasypus_novemcinctus
ENSLBEG00000006021	smfn	95	62.222	ENSDORG00000025142	-	77	62.222	Dipodomys_ordii
ENSLBEG00000006021	smfn	100	78.307	ENSDORG00000011255	Rexo2	79	78.307	Dipodomys_ordii
ENSLBEG00000006021	smfn	88	53.293	FBgn0039115	CG10214	79	53.293	Drosophila_melanogaster
ENSLBEG00000006021	smfn	88	76.647	ENSEBUG00000013964	REXO2	57	76.647	Eptatretus_burgeri
ENSLBEG00000006021	smfn	100	77.778	ENSEASG00005006674	REXO2	79	77.778	Equus_asinus_asinus
ENSLBEG00000006021	smfn	100	77.778	ENSECAG00000005988	REXO2	79	77.778	Equus_caballus
ENSLBEG00000006021	smfn	97	82.609	ENSELUG00000020072	smfn	64	82.609	Esox_lucius
ENSLBEG00000006021	smfn	100	77.778	ENSFCAG00000018632	REXO2	79	77.778	Felis_catus
ENSLBEG00000006021	smfn	96	77.901	ENSFALG00000010044	REXO2	90	77.901	Ficedula_albicollis
ENSLBEG00000006021	smfn	100	78.307	ENSFDAG00000011764	REXO2	79	78.307	Fukomys_damarensis
ENSLBEG00000006021	smfn	92	83.237	ENSGMOG00000006370	smfn	90	83.237	Gadus_morhua
ENSLBEG00000006021	smfn	96	79.558	ENSGALG00000035980	REXO2	78	79.558	Gallus_gallus
ENSLBEG00000006021	smfn	96	82.418	ENSGAFG00000015349	smfn	65	82.418	Gambusia_affinis
ENSLBEG00000006021	smfn	95	81.564	ENSGACG00000020096	smfn	88	81.564	Gasterosteus_aculeatus
ENSLBEG00000006021	smfn	100	76.190	ENSGAGG00000021126	REXO2	82	76.190	Gopherus_agassizii
ENSLBEG00000006021	smfn	100	77.249	ENSGGOG00000023267	REXO2	79	77.249	Gorilla_gorilla
ENSLBEG00000006021	smfn	69	83.846	ENSHBUG00000020097	REXO2	63	83.846	Haplochromis_burtoni
ENSLBEG00000006021	smfn	100	77.778	ENSHGLG00000013556	REXO2	79	77.778	Heterocephalus_glaber_female
ENSLBEG00000006021	smfn	100	78.307	ENSHGLG00100005257	REXO2	79	78.307	Heterocephalus_glaber_male
ENSLBEG00000006021	smfn	94	76.966	ENSHCOG00000007122	smfn	100	76.966	Hippocampus_comes
ENSLBEG00000006021	smfn	96	85.635	ENSIPUG00000020440	rexo2	67	85.635	Ictalurus_punctatus
ENSLBEG00000006021	smfn	100	78.307	ENSSTOG00000012465	REXO2	79	78.307	Ictidomys_tridecemlineatus
ENSLBEG00000006021	smfn	100	78.307	ENSJJAG00000013710	-	79	78.307	Jaculus_jaculus
ENSLBEG00000006021	smfn	100	57.672	ENSJJAG00000022605	-	74	57.672	Jaculus_jaculus
ENSLBEG00000006021	smfn	97	85.870	ENSKMAG00000016795	smfn	65	85.870	Kryptolebias_marmoratus
ENSLBEG00000006021	smfn	96	70.492	ENSLACG00000018623	REXO2	74	70.492	Latimeria_chalumnae
ENSLBEG00000006021	smfn	96	86.188	ENSLOCG00000002389	smfn	86	86.188	Lepisosteus_oculatus
ENSLBEG00000006021	smfn	100	77.778	ENSLAFG00000012451	REXO2	79	77.778	Loxodonta_africana
ENSLBEG00000006021	smfn	100	77.249	ENSMFAG00000041155	REXO2	79	77.249	Macaca_fascicularis
ENSLBEG00000006021	smfn	100	77.249	ENSMMUG00000012269	REXO2	79	77.249	Macaca_mulatta
ENSLBEG00000006021	smfn	100	77.249	ENSMNEG00000033379	REXO2	79	77.249	Macaca_nemestrina
ENSLBEG00000006021	smfn	100	77.249	ENSMLEG00000036571	REXO2	79	77.249	Mandrillus_leucophaeus
ENSLBEG00000006021	smfn	96	86.264	ENSMAMG00000021209	smfn	66	86.264	Mastacembelus_armatus
ENSLBEG00000006021	smfn	97	83.696	ENSMZEG00005020730	REXO2	70	83.696	Maylandia_zebra
ENSLBEG00000006021	smfn	97	83.696	ENSMZEG00005023224	-	70	83.696	Maylandia_zebra
ENSLBEG00000006021	smfn	81	78.846	ENSMGAG00000003026	REXO2	96	78.846	Meleagris_gallopavo
ENSLBEG00000006021	smfn	100	78.836	ENSMAUG00000014576	Rexo2	79	78.836	Mesocricetus_auratus
ENSLBEG00000006021	smfn	100	78.307	ENSMICG00000010094	REXO2	79	78.307	Microcebus_murinus
ENSLBEG00000006021	smfn	100	78.836	ENSMOCG00000009016	Rexo2	79	78.836	Microtus_ochrogaster
ENSLBEG00000006021	smfn	98	81.622	ENSMMOG00000006430	smfn	69	81.622	Mola_mola
ENSLBEG00000006021	smfn	100	77.778	ENSMODG00000013913	REXO2	80	77.778	Monodelphis_domestica
ENSLBEG00000006021	smfn	97	83.152	ENSMALG00000018130	smfn	53	83.152	Monopterus_albus
ENSLBEG00000006021	smfn	96	80.110	MGP_CAROLIEiJ_G0032166	Rexo2	76	80.110	Mus_caroli
ENSLBEG00000006021	smfn	96	80.110	ENSMUSG00000032026	Rexo2	76	80.110	Mus_musculus
ENSLBEG00000006021	smfn	96	80.110	MGP_PahariEiJ_G0015034	Rexo2	76	80.110	Mus_pahari
ENSLBEG00000006021	smfn	96	80.110	MGP_SPRETEiJ_G0033305	Rexo2	76	80.110	Mus_spretus
ENSLBEG00000006021	smfn	100	77.778	ENSMPUG00000003947	REXO2	79	77.778	Mustela_putorius_furo
ENSLBEG00000006021	smfn	100	77.249	ENSMLUG00000009030	REXO2	79	77.249	Myotis_lucifugus
ENSLBEG00000006021	smfn	100	77.778	ENSNGAG00000008819	Rexo2	92	77.778	Nannospalax_galili
ENSLBEG00000006021	smfn	99	81.383	ENSNBRG00000006529	smfn	99	81.383	Neolamprologus_brichardi
ENSLBEG00000006021	smfn	100	77.249	ENSNLEG00000029745	REXO2	79	77.249	Nomascus_leucogenys
ENSLBEG00000006021	smfn	100	77.249	ENSMEUG00000011558	REXO2	86	77.249	Notamacropus_eugenii
ENSLBEG00000006021	smfn	71	74.815	ENSOPRG00000011076	REXO2	57	74.815	Ochotona_princeps
ENSLBEG00000006021	smfn	100	78.307	ENSODEG00000009750	-	100	78.307	Octodon_degus
ENSLBEG00000006021	smfn	85	63.354	ENSODEG00000016046	-	79	63.354	Octodon_degus
ENSLBEG00000006021	smfn	97	84.783	ENSONIG00000001954	smfn	79	84.783	Oreochromis_niloticus
ENSLBEG00000006021	smfn	96	80.663	ENSOANG00000001754	REXO2	76	80.663	Ornithorhynchus_anatinus
ENSLBEG00000006021	smfn	96	80.663	ENSOCUG00000004274	REXO2	72	80.663	Oryctolagus_cuniculus
ENSLBEG00000006021	smfn	97	85.326	ENSORLG00000005119	smfn	60	85.326	Oryzias_latipes
ENSLBEG00000006021	smfn	97	84.783	ENSORLG00020010121	smfn	60	84.783	Oryzias_latipes_hni
ENSLBEG00000006021	smfn	97	85.326	ENSORLG00015015699	smfn	60	85.326	Oryzias_latipes_hsok
ENSLBEG00000006021	smfn	96	81.215	ENSOMEG00000016878	REXO2	67	81.215	Oryzias_melastigma
ENSLBEG00000006021	smfn	73	78.986	ENSOMEG00000008940	-	97	78.986	Oryzias_melastigma
ENSLBEG00000006021	smfn	100	78.307	ENSOGAG00000016860	REXO2	79	78.307	Otolemur_garnettii
ENSLBEG00000006021	smfn	100	77.778	ENSOARG00000001040	REXO2	88	77.778	Ovis_aries
ENSLBEG00000006021	smfn	100	77.249	ENSPPAG00000039849	REXO2	79	77.249	Pan_paniscus
ENSLBEG00000006021	smfn	100	77.778	ENSPPRG00000007255	REXO2	79	77.778	Panthera_pardus
ENSLBEG00000006021	smfn	100	77.778	ENSPTIG00000015578	REXO2	100	77.778	Panthera_tigris_altaica
ENSLBEG00000006021	smfn	100	77.249	ENSPTRG00000004306	REXO2	79	77.249	Pan_troglodytes
ENSLBEG00000006021	smfn	100	77.249	ENSPANG00000010675	REXO2	79	77.249	Papio_anubis
ENSLBEG00000006021	smfn	96	82.873	ENSPKIG00000000911	smfn	77	83.108	Paramormyrops_kingsleyae
ENSLBEG00000006021	smfn	100	77.249	ENSPSIG00000005151	REXO2	68	77.249	Pelodiscus_sinensis
ENSLBEG00000006021	smfn	96	84.615	ENSPMGG00000007442	smfn	97	84.615	Periophthalmus_magnuspinnatus
ENSLBEG00000006021	smfn	86	73.171	ENSPEMG00000001421	Rexo2	75	70.988	Peromyscus_maniculatus_bairdii
ENSLBEG00000006021	smfn	61	74.138	ENSPMAG00000001022	REXO2	100	74.138	Petromyzon_marinus
ENSLBEG00000006021	smfn	98	81.183	ENSPFOG00000017861	smfn	92	81.183	Poecilia_formosa
ENSLBEG00000006021	smfn	86	77.914	ENSPLAG00000007327	REXO2	62	77.914	Poecilia_latipinna
ENSLBEG00000006021	smfn	97	82.609	ENSPMEG00000017343	smfn	66	82.609	Poecilia_mexicana
ENSLBEG00000006021	smfn	96	82.967	ENSPREG00000016438	smfn	65	82.967	Poecilia_reticulata
ENSLBEG00000006021	smfn	100	77.249	ENSPPYG00000003895	REXO2	79	77.249	Pongo_abelii
ENSLBEG00000006021	smfn	100	77.249	ENSPCAG00000005237	REXO2	79	77.249	Procavia_capensis
ENSLBEG00000006021	smfn	77	80.137	ENSPCOG00000027639	REXO2	75	80.137	Propithecus_coquereli
ENSLBEG00000006021	smfn	85	76.398	ENSPVAG00000005295	REXO2	67	76.398	Pteropus_vampyrus
ENSLBEG00000006021	smfn	97	83.152	ENSPNYG00000018401	smfn	70	83.152	Pundamilia_nyererei
ENSLBEG00000006021	smfn	96	85.635	ENSPNAG00000005290	smfn	67	85.635	Pygocentrus_nattereri
ENSLBEG00000006021	smfn	100	77.778	ENSRNOG00000018939	Rexo2	79	77.778	Rattus_norvegicus
ENSLBEG00000006021	smfn	100	77.249	ENSRBIG00000037809	REXO2	79	77.249	Rhinopithecus_bieti
ENSLBEG00000006021	smfn	100	77.249	ENSRROG00000038928	REXO2	79	77.249	Rhinopithecus_roxellana
ENSLBEG00000006021	smfn	90	44.134	YLR059C	REX2	67	44.134	Saccharomyces_cerevisiae
ENSLBEG00000006021	smfn	100	78.307	ENSSBOG00000028651	REXO2	79	78.307	Saimiri_boliviensis_boliviensis
ENSLBEG00000006021	smfn	96	80.110	ENSSHAG00000008008	REXO2	77	80.110	Sarcophilus_harrisii
ENSLBEG00000006021	smfn	96	82.873	ENSSFOG00015022414	smfn	96	82.873	Scleropages_formosus
ENSLBEG00000006021	smfn	97	82.609	ENSSMAG00000003168	smfn	67	82.609	Scophthalmus_maximus
ENSLBEG00000006021	smfn	100	84.656	ENSSDUG00000015624	smfn	66	84.656	Seriola_dumerili
ENSLBEG00000006021	smfn	100	83.598	ENSSLDG00000014005	smfn	67	83.598	Seriola_lalandi_dorsalis
ENSLBEG00000006021	smfn	67	82.677	ENSSARG00000014530	REXO2	100	82.677	Sorex_araneus
ENSLBEG00000006021	smfn	81	75.163	ENSSPUG00000006005	REXO2	82	75.163	Sphenodon_punctatus
ENSLBEG00000006021	smfn	97	88.587	ENSSPAG00000001530	smfn	99	88.587	Stegastes_partitus
ENSLBEG00000006021	smfn	100	77.778	ENSSSCG00000015056	REXO2	79	77.778	Sus_scrofa
ENSLBEG00000006021	smfn	96	76.796	ENSTGUG00000000121	REXO2	77	76.796	Taeniopygia_guttata
ENSLBEG00000006021	smfn	97	79.891	ENSTRUG00000021529	smfn	68	79.891	Takifugu_rubripes
ENSLBEG00000006021	smfn	96	81.215	ENSTNIG00000008588	smfn	80	81.215	Tetraodon_nigroviridis
ENSLBEG00000006021	smfn	100	78.307	ENSTBEG00000017040	REXO2	79	78.307	Tupaia_belangeri
ENSLBEG00000006021	smfn	100	77.249	ENSTTRG00000014928	REXO2	79	77.249	Tursiops_truncatus
ENSLBEG00000006021	smfn	100	71.728	ENSUAMG00000019096	REXO2	75	79.452	Ursus_americanus
ENSLBEG00000006021	smfn	100	77.778	ENSUMAG00000003770	REXO2	79	77.778	Ursus_maritimus
ENSLBEG00000006021	smfn	100	59.259	ENSVPAG00000006301	REXO2	100	59.259	Vicugna_pacos
ENSLBEG00000006021	smfn	100	77.778	ENSVVUG00000025223	REXO2	77	80.110	Vulpes_vulpes
ENSLBEG00000006021	smfn	96	81.215	ENSXETG00000012648	rexo2	74	80.769	Xenopus_tropicalis
ENSLBEG00000006021	smfn	96	81.319	ENSXCOG00000018838	smfn	93	81.319	Xiphophorus_couchianus
ENSLBEG00000006021	smfn	96	81.868	ENSXMAG00000021125	smfn	58	81.868	Xiphophorus_maculatus