EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000006072 (Gene tree)
Gene ID: -
Gene Symbol: ddx28
Alias: zgc:153386
Full Name: DEAD-box helicase 28
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 1963 bases
Position: chrFKLU01000001.1:5208580-5210542
Accession: 109992941
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000007847	DEAD	PF00270.29	1e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000008248	-	1689	XM_020645767	ENSLBEP00000007847	562 (aa)	XP_020501423	-

Gene Model

Click here to download ENSLBEG00000006072's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000006072's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000006072	ddx28	64	30.411	ENSLBEG00000026649	-	53	30.352
ENSLBEG00000006072	ddx28	62	31.445	ENSLBEG00000022905	ddx5	55	31.534
ENSLBEG00000006072	ddx28	64	30.601	ENSLBEG00000010767	DDX5	54	30.685

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000006072	ddx28	92	48.289	ENSG00000182810	DDX28	96	49.049	Homo_sapiens
ENSLBEG00000006072	ddx28	99	80.496	ENSAPOG00000000991	ddx28	98	80.496	Acanthochromis_polyacanthus
ENSLBEG00000006072	ddx28	90	47.379	ENSAMEG00000019426	DDX28	95	48.155	Ailuropoda_melanoleuca
ENSLBEG00000006072	ddx28	100	79.292	ENSACIG00000021615	ddx28	99	79.292	Amphilophus_citrinellus
ENSLBEG00000006072	ddx28	99	80.851	ENSAOCG00000004610	ddx28	98	80.851	Amphiprion_ocellaris
ENSLBEG00000006072	ddx28	99	80.319	ENSAPEG00000002143	ddx28	98	80.319	Amphiprion_percula
ENSLBEG00000006072	ddx28	99	79.929	ENSATEG00000018691	ddx28	99	79.929	Anabas_testudineus
ENSLBEG00000006072	ddx28	91	45.914	ENSACAG00000009755	DDX28	94	45.914	Anolis_carolinensis
ENSLBEG00000006072	ddx28	100	75.752	ENSACLG00000012984	ddx28	99	75.752	Astatotilapia_calliptera
ENSLBEG00000006072	ddx28	98	62.500	ENSAMXG00000005878	ddx28	99	62.500	Astyanax_mexicanus
ENSLBEG00000006072	ddx28	90	48.249	ENSBTAG00000004290	DDX28	93	48.249	Bos_taurus
ENSLBEG00000006072	ddx28	93	45.489	ENSCAFG00000020327	DDX28	98	46.241	Canis_familiaris
ENSLBEG00000006072	ddx28	93	45.489	ENSCAFG00020019785	DDX28	98	46.241	Canis_lupus_dingo
ENSLBEG00000006072	ddx28	91	48.170	ENSCHIG00000009658	DDX28	94	48.170	Capra_hircus
ENSLBEG00000006072	ddx28	90	48.738	ENSCPOG00000013746	DDX28	94	48.738	Cavia_porcellus
ENSLBEG00000006072	ddx28	92	49.430	ENSCSAG00000018472	DDX28	95	49.430	Chlorocebus_sabaeus
ENSLBEG00000006072	ddx28	82	49.134	ENSCPBG00000012105	DDX28	81	50.611	Chrysemys_picta_bellii
ENSLBEG00000006072	ddx28	65	37.158	ENSCSAVG00000006341	-	94	36.885	Ciona_savignyi
ENSLBEG00000006072	ddx28	88	48.594	ENSCGRG00001024412	Ddx28	94	48.703	Cricetulus_griseus_chok1gshd
ENSLBEG00000006072	ddx28	100	67.478	ENSCSEG00000011651	ddx28	100	67.535	Cynoglossus_semilaevis
ENSLBEG00000006072	ddx28	99	74.468	ENSCVAG00000004044	ddx28	99	74.468	Cyprinodon_variegatus
ENSLBEG00000006072	ddx28	89	64.833	ENSDARG00000060411	ddx28	90	64.833	Danio_rerio
ENSLBEG00000006072	ddx28	65	53.678	ENSDNOG00000033593	DDX28	99	54.768	Dasypus_novemcinctus
ENSLBEG00000006072	ddx28	91	47.195	ENSDORG00000028868	Ddx28	95	47.490	Dipodomys_ordii
ENSLBEG00000006072	ddx28	80	36.585	FBgn0086130	Dbp21E2	82	36.585	Drosophila_melanogaster
ENSLBEG00000006072	ddx28	91	49.136	ENSETEG00000001062	-	95	49.136	Echinops_telfairi
ENSLBEG00000006072	ddx28	76	42.932	ENSEBUG00000004791	ddx28	81	41.429	Eptatretus_burgeri
ENSLBEG00000006072	ddx28	90	47.389	ENSEASG00005020387	DDX28	94	47.969	Equus_asinus_asinus
ENSLBEG00000006072	ddx28	90	47.582	ENSECAG00000006451	DDX28	94	48.162	Equus_caballus
ENSLBEG00000006072	ddx28	73	42.721	ENSEEUG00000005017	DDX28	96	43.675	Erinaceus_europaeus
ENSLBEG00000006072	ddx28	95	67.778	ENSELUG00000005302	ddx28	97	70.312	Esox_lucius
ENSLBEG00000006072	ddx28	92	48.479	ENSFCAG00000012858	DDX28	96	48.479	Felis_catus
ENSLBEG00000006072	ddx28	99	71.631	ENSFHEG00000012573	ddx28	99	71.631	Fundulus_heteroclitus
ENSLBEG00000006072	ddx28	93	70.056	ENSGMOG00000017045	ddx28	99	70.056	Gadus_morhua
ENSLBEG00000006072	ddx28	91	44.847	ENSGALG00000048700	DDX28	89	44.952	Gallus_gallus
ENSLBEG00000006072	ddx28	99	71.914	ENSGAFG00000009249	ddx28	99	71.914	Gambusia_affinis
ENSLBEG00000006072	ddx28	91	80.000	ENSGACG00000016367	ddx28	95	80.000	Gasterosteus_aculeatus
ENSLBEG00000006072	ddx28	76	47.086	ENSGAGG00000004565	DDX28	93	47.086	Gopherus_agassizii
ENSLBEG00000006072	ddx28	92	48.289	ENSGGOG00000001220	DDX28	96	49.049	Gorilla_gorilla
ENSLBEG00000006072	ddx28	100	79.292	ENSHBUG00000001016	ddx28	99	79.292	Haplochromis_burtoni
ENSLBEG00000006072	ddx28	99	70.973	ENSHCOG00000017590	ddx28	99	71.099	Hippocampus_comes
ENSLBEG00000006072	ddx28	99	60.211	ENSIPUG00000017350	Ddx28	98	60.211	Ictalurus_punctatus
ENSLBEG00000006072	ddx28	90	48.444	ENSSTOG00000002064	DDX28	94	48.444	Ictidomys_tridecemlineatus
ENSLBEG00000006072	ddx28	91	48.549	ENSJJAG00000012460	-	95	48.549	Jaculus_jaculus
ENSLBEG00000006072	ddx28	99	73.628	ENSKMAG00000018183	ddx28	99	73.628	Kryptolebias_marmoratus
ENSLBEG00000006072	ddx28	91	57.060	ENSLACG00000005578	DDX28	89	57.060	Latimeria_chalumnae
ENSLBEG00000006072	ddx28	93	59.280	ENSLOCG00000017604	ddx28	93	59.280	Lepisosteus_oculatus
ENSLBEG00000006072	ddx28	90	48.638	ENSLAFG00000031239	DDX28	94	48.638	Loxodonta_africana
ENSLBEG00000006072	ddx28	92	49.240	ENSMMUG00000010836	DDX28	95	49.240	Macaca_mulatta
ENSLBEG00000006072	ddx28	99	75.714	ENSMAMG00000020220	ddx28	98	75.714	Mastacembelus_armatus
ENSLBEG00000006072	ddx28	100	79.469	ENSMZEG00005009292	ddx28	99	79.469	Maylandia_zebra
ENSLBEG00000006072	ddx28	90	38.641	ENSMICG00000012346	-	93	38.641	Microcebus_murinus
ENSLBEG00000006072	ddx28	90	49.027	ENSMOCG00000009815	Ddx28	94	49.027	Microtus_ochrogaster
ENSLBEG00000006072	ddx28	97	76.557	ENSMMOG00000000270	ddx28	97	76.557	Mola_mola
ENSLBEG00000006072	ddx28	91	47.082	ENSMODG00000005303	DDX28	93	48.054	Monodelphis_domestica
ENSLBEG00000006072	ddx28	99	77.265	ENSMALG00000008864	ddx28	99	77.265	Monopterus_albus
ENSLBEG00000006072	ddx28	90	48.924	MGP_CAROLIEiJ_G0031510	Ddx28	93	48.924	Mus_caroli
ENSLBEG00000006072	ddx28	90	49.023	ENSMUSG00000045538	Ddx28	93	49.023	Mus_musculus
ENSLBEG00000006072	ddx28	90	48.828	MGP_PahariEiJ_G0023110	Ddx28	93	48.828	Mus_pahari
ENSLBEG00000006072	ddx28	90	49.023	MGP_SPRETEiJ_G0032628	Ddx28	93	49.023	Mus_spretus
ENSLBEG00000006072	ddx28	70	48.379	ENSMPUG00000006915	DDX28	98	49.377	Mustela_putorius_furo
ENSLBEG00000006072	ddx28	89	48.024	ENSMLUG00000005899	DDX28	93	48.419	Myotis_lucifugus
ENSLBEG00000006072	ddx28	90	49.320	ENSNGAG00000015762	Ddx28	94	49.126	Nannospalax_galili
ENSLBEG00000006072	ddx28	99	79.964	ENSNBRG00000001337	ddx28	100	79.964	Neolamprologus_brichardi
ENSLBEG00000006072	ddx28	100	80.000	ENSONIG00000020597	ddx28	99	80.000	Oreochromis_niloticus
ENSLBEG00000006072	ddx28	52	51.712	ENSOANG00000003551	-	98	52.297	Ornithorhynchus_anatinus
ENSLBEG00000006072	ddx28	91	49.421	ENSOCUG00000023074	DDX28	95	49.421	Oryctolagus_cuniculus
ENSLBEG00000006072	ddx28	98	74.281	ENSORLG00000011968	ddx28	98	74.281	Oryzias_latipes
ENSLBEG00000006072	ddx28	98	74.188	ENSORLG00020001951	ddx28	99	74.188	Oryzias_latipes_hni
ENSLBEG00000006072	ddx28	98	74.368	ENSORLG00015023030	ddx28	99	74.368	Oryzias_latipes_hsok
ENSLBEG00000006072	ddx28	99	73.227	ENSOMEG00000012445	ddx28	99	73.227	Oryzias_melastigma
ENSLBEG00000006072	ddx28	90	49.416	ENSOGAG00000016895	DDX28	94	49.416	Otolemur_garnettii
ENSLBEG00000006072	ddx28	78	47.768	ENSOARG00000003313	DDX28	99	47.768	Ovis_aries
ENSLBEG00000006072	ddx28	92	46.667	ENSPPAG00000036971	DDX28	96	46.667	Pan_paniscus
ENSLBEG00000006072	ddx28	92	48.952	ENSPPRG00000018322	DDX28	96	48.952	Panthera_pardus
ENSLBEG00000006072	ddx28	92	47.810	ENSPTIG00000006444	DDX28	96	47.810	Panthera_tigris_altaica
ENSLBEG00000006072	ddx28	92	48.952	ENSPTRG00000008258	DDX28	96	48.952	Pan_troglodytes
ENSLBEG00000006072	ddx28	93	62.407	ENSPKIG00000021200	ddx28	99	62.407	Paramormyrops_kingsleyae
ENSLBEG00000006072	ddx28	50	56.584	ENSPSIG00000001127	DDX28	92	56.584	Pelodiscus_sinensis
ENSLBEG00000006072	ddx28	98	68.478	ENSPMGG00000007908	ddx28	97	68.478	Periophthalmus_magnuspinnatus
ENSLBEG00000006072	ddx28	90	47.868	ENSPEMG00000003395	Ddx28	94	47.868	Peromyscus_maniculatus_bairdii
ENSLBEG00000006072	ddx28	51	47.552	ENSPMAG00000006983	DDX28	94	47.552	Petromyzon_marinus
ENSLBEG00000006072	ddx28	99	72.518	ENSPFOG00000020952	ddx28	98	72.518	Poecilia_formosa
ENSLBEG00000006072	ddx28	99	72.518	ENSPFOG00000020838	DDX28	99	72.518	Poecilia_formosa
ENSLBEG00000006072	ddx28	99	72.163	ENSPLAG00000016292	ddx28	98	72.163	Poecilia_latipinna
ENSLBEG00000006072	ddx28	99	72.518	ENSPMEG00000011311	ddx28	98	72.518	Poecilia_mexicana
ENSLBEG00000006072	ddx28	99	71.809	ENSPREG00000002899	ddx28	98	71.809	Poecilia_reticulata
ENSLBEG00000006072	ddx28	92	48.099	ENSPPYG00000007481	DDX28	96	48.859	Pongo_abelii
ENSLBEG00000006072	ddx28	90	48.444	ENSPCOG00000024632	DDX28	94	48.444	Propithecus_coquereli
ENSLBEG00000006072	ddx28	100	79.292	ENSPNYG00000018804	ddx28	99	79.292	Pundamilia_nyererei
ENSLBEG00000006072	ddx28	90	62.428	ENSPNAG00000014597	ddx28	95	62.428	Pygocentrus_nattereri
ENSLBEG00000006072	ddx28	90	49.020	ENSRNOG00000019817	Ddx28	93	49.020	Rattus_norvegicus
ENSLBEG00000006072	ddx28	91	63.707	ENSSFOG00015010181	ddx28	93	63.830	Scleropages_formosus
ENSLBEG00000006072	ddx28	90	79.648	ENSSMAG00000006831	ddx28	95	79.648	Scophthalmus_maximus
ENSLBEG00000006072	ddx28	99	79.610	ENSSDUG00000003257	ddx28	98	79.610	Seriola_dumerili
ENSLBEG00000006072	ddx28	99	79.255	ENSSLDG00000004513	ddx28	98	79.255	Seriola_lalandi_dorsalis
ENSLBEG00000006072	ddx28	90	47.860	ENSSARG00000014169	DDX28	94	48.638	Sorex_araneus
ENSLBEG00000006072	ddx28	99	79.715	ENSSPAG00000000988	ddx28	99	79.715	Stegastes_partitus
ENSLBEG00000006072	ddx28	91	47.893	ENSSSCG00000026038	DDX28	95	48.084	Sus_scrofa
ENSLBEG00000006072	ddx28	99	70.609	ENSTRUG00000007815	ddx28	99	70.609	Takifugu_rubripes
ENSLBEG00000006072	ddx28	90	75.198	ENSTNIG00000011352	ddx28	99	75.198	Tetraodon_nigroviridis
ENSLBEG00000006072	ddx28	73	61.502	ENSTBEG00000017695	DDX28	76	61.502	Tupaia_belangeri
ENSLBEG00000006072	ddx28	90	47.287	ENSUAMG00000016116	DDX28	94	48.062	Ursus_americanus
ENSLBEG00000006072	ddx28	77	49.774	ENSUMAG00000019200	DDX28	89	50.679	Ursus_maritimus
ENSLBEG00000006072	ddx28	77	40.498	ENSVVUG00000012876	DDX28	85	41.403	Vulpes_vulpes
ENSLBEG00000006072	ddx28	89	47.600	ENSXETG00000005435	ddx28	97	47.600	Xenopus_tropicalis
ENSLBEG00000006072	ddx28	97	73.818	ENSXCOG00000012364	ddx28	96	73.818	Xiphophorus_couchianus
ENSLBEG00000006072	ddx28	91	75.922	ENSXMAG00000019603	ddx28	93	75.922	Xiphophorus_maculatus