EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000006082 (Gene tree)
Gene ID: -
Gene Symbol: zgc:171929
Alias: -
Full Name: zgc:171929
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 3721 bases
Position: chrFKLU01000320.1:518436-522156
Accession: ZDB-GENE-070820-19
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000007857	zf-C2H2	PF00096.26	2.5e-17	1	3
ENSLBEP00000007857	zf-C2H2	PF00096.26	2.5e-17	2	3
ENSLBEP00000007857	zf-C2H2	PF00096.26	2.5e-17	3	3
ENSLBEP00000007857	zf-met	PF12874.7	0.0001	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000008259	-	1543	-	ENSLBEP00000007857	278 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000006082's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000006082's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000006082	zgc:171929	52	39.796	ENSLBEG00000013235	-	60	39.796
ENSLBEG00000006082	zgc:171929	51	39.785	ENSLBEG00000018509	-	89	39.785
ENSLBEG00000006082	zgc:171929	77	43.396	ENSLBEG00000011313	-	87	40.789
ENSLBEG00000006082	zgc:171929	85	38.182	ENSLBEG00000010165	-	76	39.286
ENSLBEG00000006082	zgc:171929	54	42.029	ENSLBEG00000024737	-	94	42.667
ENSLBEG00000006082	zgc:171929	54	35.849	ENSLBEG00000014211	-	83	35.849
ENSLBEG00000006082	zgc:171929	84	39.506	ENSLBEG00000013570	-	95	39.506
ENSLBEG00000006082	zgc:171929	66	38.462	ENSLBEG00000026457	-	81	38.462
ENSLBEG00000006082	zgc:171929	77	42.045	ENSLBEG00000010278	-	98	42.045
ENSLBEG00000006082	zgc:171929	54	41.176	ENSLBEG00000024509	-	57	44.156
ENSLBEG00000006082	zgc:171929	50	43.529	ENSLBEG00000001920	-	89	43.902
ENSLBEG00000006082	zgc:171929	51	42.353	ENSLBEG00000008606	-	58	44.048
ENSLBEG00000006082	zgc:171929	50	37.647	ENSLBEG00000011986	-	67	37.647
ENSLBEG00000006082	zgc:171929	73	34.314	ENSLBEG00000014676	-	68	34.314
ENSLBEG00000006082	zgc:171929	63	41.176	ENSLBEG00000008689	-	72	35.200
ENSLBEG00000006082	zgc:171929	50	36.082	ENSLBEG00000020747	-	66	36.082
ENSLBEG00000006082	zgc:171929	55	42.353	ENSLBEG00000002357	-	86	43.023

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000006082	zgc:171929	100	64.388	ENSAPOG00000006365	zgc:171929	98	64.388	Acanthochromis_polyacanthus
ENSLBEG00000006082	zgc:171929	100	66.187	ENSAOCG00000010460	zgc:171929	98	66.187	Amphiprion_ocellaris
ENSLBEG00000006082	zgc:171929	53	64.865	ENSAPLG00000016199	OVOL2	79	64.865	Anas_platyrhynchos
ENSLBEG00000006082	zgc:171929	90	44.358	ENSACAG00000014216	OVOL2	91	44.358	Anolis_carolinensis
ENSLBEG00000006082	zgc:171929	73	44.393	ENSANAG00000026429	OVOL2	100	44.393	Aotus_nancymaae
ENSLBEG00000006082	zgc:171929	91	44.737	ENSCAFG00000005453	OVOL2	92	44.118	Canis_familiaris
ENSLBEG00000006082	zgc:171929	91	44.737	ENSCAFG00020027506	OVOL2	92	44.118	Canis_lupus_dingo
ENSLBEG00000006082	zgc:171929	91	47.308	ENSCPBG00000023454	OVOL2	92	47.308	Chrysemys_picta_bellii
ENSLBEG00000006082	zgc:171929	91	45.098	ENSCANG00000033179	OVOL2	90	45.098	Colobus_angolensis_palliatus
ENSLBEG00000006082	zgc:171929	100	69.424	ENSCVAG00000001397	zgc:171929	100	69.424	Cyprinodon_variegatus
ENSLBEG00000006082	zgc:171929	91	44.444	ENSDORG00000016697	Ovol2	91	45.149	Dipodomys_ordii
ENSLBEG00000006082	zgc:171929	91	44.151	ENSEASG00005001990	OVOL2	92	45.660	Equus_asinus_asinus
ENSLBEG00000006082	zgc:171929	91	45.349	ENSECAG00000007899	OVOL2	92	46.360	Equus_caballus
ENSLBEG00000006082	zgc:171929	100	62.585	ENSELUG00000020356	zgc:171929	99	62.925	Esox_lucius
ENSLBEG00000006082	zgc:171929	91	45.076	ENSFCAG00000027530	OVOL2	92	46.617	Felis_catus
ENSLBEG00000006082	zgc:171929	91	45.977	ENSFALG00000007594	OVOL2	92	46.183	Ficedula_albicollis
ENSLBEG00000006082	zgc:171929	97	45.055	ENSGALG00000008702	OVOL2	96	45.421	Gallus_gallus
ENSLBEG00000006082	zgc:171929	91	47.368	ENSGAGG00000020202	OVOL2	92	47.368	Gopherus_agassizii
ENSLBEG00000006082	zgc:171929	91	45.946	ENSHGLG00000016810	OVOL2	91	45.946	Heterocephalus_glaber_female
ENSLBEG00000006082	zgc:171929	57	56.977	ENSSTOG00000024979	OVOL2	91	45.560	Ictidomys_tridecemlineatus
ENSLBEG00000006082	zgc:171929	91	46.512	ENSJJAG00000014942	Ovol2	91	46.512	Jaculus_jaculus
ENSLBEG00000006082	zgc:171929	90	45.136	ENSLACG00000011247	OVOL2	91	45.136	Latimeria_chalumnae
ENSLBEG00000006082	zgc:171929	100	66.187	ENSMAMG00000021196	zgc:171929	100	66.187	Mastacembelus_armatus
ENSLBEG00000006082	zgc:171929	53	64.189	ENSMGAG00000006770	OVOL2	85	64.189	Meleagris_gallopavo
ENSLBEG00000006082	zgc:171929	53	64.000	ENSMICG00000032455	OVOL2	91	46.360	Microcebus_murinus
ENSLBEG00000006082	zgc:171929	91	44.403	ENSMODG00000005504	OVOL2	92	45.000	Monodelphis_domestica
ENSLBEG00000006082	zgc:171929	91	44.528	MGP_CAROLIEiJ_G0024381	Ovol2	91	45.000	Mus_caroli
ENSLBEG00000006082	zgc:171929	91	44.528	ENSMUSG00000037279	Ovol2	91	45.000	Mus_musculus
ENSLBEG00000006082	zgc:171929	91	44.528	MGP_PahariEiJ_G0025825	Ovol2	91	45.000	Mus_pahari
ENSLBEG00000006082	zgc:171929	91	44.528	MGP_SPRETEiJ_G0025300	Ovol2	91	45.000	Mus_spretus
ENSLBEG00000006082	zgc:171929	91	46.124	ENSNGAG00000007174	Ovol2	91	46.124	Nannospalax_galili
ENSLBEG00000006082	zgc:171929	53	62.000	ENSMEUG00000011922	OVOL2	91	44.737	Notamacropus_eugenii
ENSLBEG00000006082	zgc:171929	100	69.751	ENSONIG00000004778	zgc:171929	100	69.751	Oreochromis_niloticus
ENSLBEG00000006082	zgc:171929	53	62.667	ENSOCUG00000012116	OVOL2	59	62.667	Oryctolagus_cuniculus
ENSLBEG00000006082	zgc:171929	100	65.233	ENSORLG00015015191	zgc:171929	100	65.233	Oryzias_latipes_hsok
ENSLBEG00000006082	zgc:171929	91	43.956	ENSOGAG00000030325	OVOL2	91	45.420	Otolemur_garnettii
ENSLBEG00000006082	zgc:171929	91	45.455	ENSPPRG00000006276	OVOL2	91	45.283	Panthera_pardus
ENSLBEG00000006082	zgc:171929	69	54.359	ENSPSIG00000006768	OVOL2	81	54.545	Pelodiscus_sinensis
ENSLBEG00000006082	zgc:171929	62	87.135	ENSPMEG00000005347	zgc:171929	85	87.135	Poecilia_mexicana
ENSLBEG00000006082	zgc:171929	54	62.658	ENSPCOG00000013518	OVOL2	91	45.725	Propithecus_coquereli
ENSLBEG00000006082	zgc:171929	53	62.667	ENSPVAG00000001140	OVOL2	63	62.667	Pteropus_vampyrus
ENSLBEG00000006082	zgc:171929	91	44.318	ENSSHAG00000018466	OVOL2	92	44.318	Sarcophilus_harrisii
ENSLBEG00000006082	zgc:171929	84	79.487	ENSSMAG00000003204	zgc:171929	97	79.487	Scophthalmus_maximus
ENSLBEG00000006082	zgc:171929	56	60.510	ENSSPUG00000001720	OVOL2	67	68.702	Sphenodon_punctatus
ENSLBEG00000006082	zgc:171929	63	89.080	ENSSPAG00000001700	zgc:171929	79	89.080	Stegastes_partitus
ENSLBEG00000006082	zgc:171929	91	44.444	ENSTGUG00000005909	OVOL2	92	45.211	Taeniopygia_guttata
ENSLBEG00000006082	zgc:171929	91	43.411	ENSXETG00000020587	ovol1	94	43.411	Xenopus_tropicalis
ENSLBEG00000006082	zgc:171929	91	44.569	ENSXETG00000024897	ovol2	92	44.569	Xenopus_tropicalis
ENSLBEG00000006082	zgc:171929	65	83.889	ENSXMAG00000022405	zgc:171929	86	83.889	Xiphophorus_maculatus