EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000006087 (Gene tree)
Gene ID: 109998604
Gene Symbol: rab11ba
Alias: rab11b|wu:fb07g11|zgc:55760
Full Name: ras-related protein Rab-11B-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 8304 bases
Position: chrFKLU01000499.1:311366-319669
Accession: 109998604
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000007890	MMR_HSR1	PF01926.23	3.7e-07	1	1
ENSLBEP00000007911	MMR_HSR1	PF01926.23	5.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000008294	-	3871	XM_020653522	ENSLBEP00000007890	217 (aa)	XP_020509178	UPI0009B4798C
ENSLBET00000008316	-	759	-	ENSLBEP00000007911	252 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000006087's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000006087's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000006087	rab11ba	71	32.704	ENSLBEG00000018180	si:dkey-13a21.4	78	32.704
ENSLBEG00000006087	rab11ba	90	32.000	ENSLBEG00000026930	rab6ba	92	32.000
ENSLBEG00000006087	rab11ba	66	42.000	ENSLBEG00000018063	-	62	42.000
ENSLBEG00000006087	rab11ba	79	49.708	ENSLBEG00000027226	-	73	49.708
ENSLBEG00000006087	rab11ba	100	63.761	ENSLBEG00000016446	rab25b	100	63.761
ENSLBEG00000006087	rab11ba	99	62.037	ENSLBEG00000002367	rab25a	98	62.037
ENSLBEG00000006087	rab11ba	82	38.421	ENSLBEG00000027691	RAB17	79	38.421
ENSLBEG00000006087	rab11ba	73	39.877	ENSLBEG00000001796	RAB7A	78	39.877
ENSLBEG00000006087	rab11ba	79	40.462	ENSLBEG00000025798	zgc:101559	74	40.462
ENSLBEG00000006087	rab11ba	73	39.877	ENSLBEG00000017798	-	78	39.877
ENSLBEG00000006087	rab11ba	81	40.000	ENSLBEG00000013756	rab12	74	40.000
ENSLBEG00000006087	rab11ba	100	87.097	ENSLBEG00000026857	rab11a	100	87.097
ENSLBEG00000006087	rab11ba	95	32.547	ENSLBEG00000005018	rab32b	95	32.547
ENSLBEG00000006087	rab11ba	96	43.269	ENSLBEG00000001618	rab35b	99	43.269
ENSLBEG00000006087	rab11ba	88	32.124	ENSLBEG00000003132	rras	93	33.171
ENSLBEG00000006087	rab11ba	80	45.402	ENSLBEG00000007681	si:dkey-16l2.16	98	41.346
ENSLBEG00000006087	rab11ba	79	54.386	ENSLBEG00000020796	rab2a	99	47.619
ENSLBEG00000006087	rab11ba	73	44.654	ENSLBEG00000027539	-	73	44.654
ENSLBEG00000006087	rab11ba	77	35.714	ENSLBEG00000003644	rabl2	72	36.310
ENSLBEG00000006087	rab11ba	54	30.579	ENSLBEG00000011152	arl4d	59	30.579
ENSLBEG00000006087	rab11ba	80	51.724	ENSLBEG00000019435	rab14	81	51.724
ENSLBEG00000006087	rab11ba	53	39.316	ENSLBEG00000027819	rab34b	58	39.316
ENSLBEG00000006087	rab11ba	94	42.857	ENSLBEG00000002516	rab5aa	85	42.857
ENSLBEG00000006087	rab11ba	100	88.479	ENSLBEG00000005981	-	100	88.479
ENSLBEG00000006087	rab11ba	76	42.771	ENSLBEG00000013463	rab15	78	42.771
ENSLBEG00000006087	rab11ba	77	51.497	ENSLBEG00000026790	-	78	51.497
ENSLBEG00000006087	rab11ba	80	30.270	ENSLBEG00000016218	rasl11a	71	30.645
ENSLBEG00000006087	rab11ba	75	38.323	ENSLBEG00000020582	rab9a	82	38.323
ENSLBEG00000006087	rab11ba	73	44.654	ENSLBEG00000026989	RAB15	75	44.654
ENSLBEG00000006087	rab11ba	96	45.933	ENSLBEG00000027781	rab1ab	99	45.933
ENSLBEG00000006087	rab11ba	75	32.317	ENSLBEG00000025705	si:ch73-116o1.2	82	34.091
ENSLBEG00000006087	rab11ba	100	95.853	ENSLBEG00000004172	-	100	95.853
ENSLBEG00000006087	rab11ba	94	40.777	ENSLBEG00000001313	RAB39B	96	40.777
ENSLBEG00000006087	rab11ba	72	35.032	ENSLBEG00000019372	rab6bb	75	35.032
ENSLBEG00000006087	rab11ba	77	34.731	ENSLBEG00000015149	-	70	35.928
ENSLBEG00000006087	rab11ba	82	45.251	ENSLBEG00000022630	-	84	45.251
ENSLBEG00000006087	rab11ba	87	33.333	ENSLBEG00000008746	RAB41	85	33.333
ENSLBEG00000006087	rab11ba	80	50.289	ENSLBEG00000005791	-	80	50.289
ENSLBEG00000006087	rab11ba	79	37.931	ENSLBEG00000026777	rab33ba	76	37.931
ENSLBEG00000006087	rab11ba	80	46.243	ENSLBEG00000026779	rab13	87	46.243
ENSLBEG00000006087	rab11ba	74	47.826	ENSLBEG00000004128	rab5c	73	47.826
ENSLBEG00000006087	rab11ba	75	45.732	ENSLBEG00000019428	rab18b	83	44.444
ENSLBEG00000006087	rab11ba	74	46.584	ENSLBEG00000010408	-	89	40.488
ENSLBEG00000006087	rab11ba	74	42.857	ENSLBEG00000003235	rab22a	83	42.857
ENSLBEG00000006087	rab11ba	53	30.252	ENSLBEG00000012677	arl4cb	60	30.252
ENSLBEG00000006087	rab11ba	94	34.615	ENSLBEG00000002926	si:dkey-34d22.5	91	34.615
ENSLBEG00000006087	rab11ba	70	34.194	ENSLBEG00000028450	kras	87	35.329
ENSLBEG00000006087	rab11ba	82	38.462	ENSLBEG00000005128	-	78	38.462
ENSLBEG00000006087	rab11ba	86	42.473	ENSLBEG00000001146	rab30	90	42.473
ENSLBEG00000006087	rab11ba	74	45.679	ENSLBEG00000005861	rab18a	79	44.379
ENSLBEG00000006087	rab11ba	73	31.875	ENSLBEG00000014885	rheb	86	31.875
ENSLBEG00000006087	rab11ba	100	94.495	ENSLBEG00000015248	rab11bb	100	94.495
ENSLBEG00000006087	rab11ba	66	34.965	ENSLBEG00000013176	rab23	79	33.742
ENSLBEG00000006087	rab11ba	94	36.058	ENSLBEG00000014427	rab33a	89	36.058
ENSLBEG00000006087	rab11ba	96	45.933	ENSLBEG00000003101	rab4a	98	45.933
ENSLBEG00000006087	rab11ba	83	42.623	ENSLBEG00000001193	rab42a	84	42.623
ENSLBEG00000006087	rab11ba	79	40.341	ENSLBEG00000011478	rab9b	79	40.341
ENSLBEG00000006087	rab11ba	76	53.012	ENSLBEG00000028426	RAB1A	83	52.381
ENSLBEG00000006087	rab11ba	96	46.635	ENSLBEG00000021040	rab1ba	99	46.635
ENSLBEG00000006087	rab11ba	78	32.571	ENSLBEG00000006152	-	85	32.571
ENSLBEG00000006087	rab11ba	99	81.481	ENSLBEG00000016417	rab11al	99	81.481
ENSLBEG00000006087	rab11ba	94	32.093	ENSLBEG00000026006	rab34a	77	32.093
ENSLBEG00000006087	rab11ba	79	32.203	ENSLBEG00000018812	RAB29	92	32.203
ENSLBEG00000006087	rab11ba	80	33.714	ENSLBEG00000001905	hrasb	94	35.196
ENSLBEG00000006087	rab11ba	72	36.306	ENSLBEG00000003748	rab6a	75	36.306
ENSLBEG00000006087	rab11ba	75	32.934	ENSLBEG00000027628	si:cabz01085950.1	82	32.934

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000006087	rab11ba	100	94.954	ENSG00000185236	RAB11B	100	95.652	Homo_sapiens
ENSLBEG00000006087	rab11ba	99	94.064	ENSAMEG00000004955	RAB11B	99	94.064	Ailuropoda_melanoleuca
ENSLBEG00000006087	rab11ba	86	90.909	ENSACIG00000024374	rab11ba	77	90.909	Amphilophus_citrinellus
ENSLBEG00000006087	rab11ba	100	96.789	ENSAOCG00000018050	rab11ba	100	96.789	Amphiprion_ocellaris
ENSLBEG00000006087	rab11ba	100	96.330	ENSAPEG00000009177	rab11ba	100	96.330	Amphiprion_percula
ENSLBEG00000006087	rab11ba	100	96.789	ENSATEG00000023730	rab11ba	100	96.789	Anabas_testudineus
ENSLBEG00000006087	rab11ba	100	94.954	ENSANAG00000037616	RAB11B	100	94.954	Aotus_nancymaae
ENSLBEG00000006087	rab11ba	100	94.495	ENSACLG00000005420	rab11ba	100	94.495	Astatotilapia_calliptera
ENSLBEG00000006087	rab11ba	99	83.796	ENSACLG00000018852	-	97	83.796	Astatotilapia_calliptera
ENSLBEG00000006087	rab11ba	99	79.070	WBGene00004274	rab-11.1	99	79.070	Caenorhabditis_elegans
ENSLBEG00000006087	rab11ba	100	94.954	ENSCJAG00000010778	RAB11B	100	94.954	Callithrix_jacchus
ENSLBEG00000006087	rab11ba	100	94.954	ENSCAFG00000032060	RAB11B	100	94.954	Canis_familiaris
ENSLBEG00000006087	rab11ba	100	94.954	ENSCAFG00020022184	RAB11B	100	94.954	Canis_lupus_dingo
ENSLBEG00000006087	rab11ba	100	94.954	ENSTSYG00000014758	RAB11B	100	94.954	Carlito_syrichta
ENSLBEG00000006087	rab11ba	100	94.954	ENSCPOG00000030154	RAB11B	100	94.954	Cavia_porcellus
ENSLBEG00000006087	rab11ba	100	94.954	ENSCCAG00000031042	RAB11B	100	94.954	Cebus_capucinus
ENSLBEG00000006087	rab11ba	100	94.954	ENSCLAG00000003207	RAB11B	100	94.954	Chinchilla_lanigera
ENSLBEG00000006087	rab11ba	100	94.954	ENSCSAG00000008024	RAB11B	100	94.954	Chlorocebus_sabaeus
ENSLBEG00000006087	rab11ba	100	81.193	ENSCHOG00000013525	RAB11B	100	81.193	Choloepus_hoffmanni
ENSLBEG00000006087	rab11ba	100	83.871	ENSCING00000009526	-	100	83.871	Ciona_intestinalis
ENSLBEG00000006087	rab11ba	100	94.954	ENSCANG00000040517	RAB11B	100	94.954	Colobus_angolensis_palliatus
ENSLBEG00000006087	rab11ba	100	94.954	ENSCGRG00001013827	Rab11b	100	94.954	Cricetulus_griseus_chok1gshd
ENSLBEG00000006087	rab11ba	100	94.954	ENSCGRG00000010967	Rab11b	100	94.954	Cricetulus_griseus_crigri
ENSLBEG00000006087	rab11ba	100	96.330	ENSCSEG00000007121	rab11ba	84	96.330	Cynoglossus_semilaevis
ENSLBEG00000006087	rab11ba	100	94.954	ENSDARG00000041878	rab11ba	100	94.954	Danio_rerio
ENSLBEG00000006087	rab11ba	100	94.954	ENSDNOG00000014618	RAB11B	97	94.954	Dasypus_novemcinctus
ENSLBEG00000006087	rab11ba	100	93.119	ENSDNOG00000004134	-	100	93.119	Dasypus_novemcinctus
ENSLBEG00000006087	rab11ba	100	94.037	ENSDORG00000006304	Rab11b	100	94.037	Dipodomys_ordii
ENSLBEG00000006087	rab11ba	100	80.275	ENSEBUG00000015447	-	100	80.275	Eptatretus_burgeri
ENSLBEG00000006087	rab11ba	100	89.450	ENSEBUG00000011775	rab11ba	99	89.268	Eptatretus_burgeri
ENSLBEG00000006087	rab11ba	66	98.601	ENSEEUG00000009165	-	100	98.601	Erinaceus_europaeus
ENSLBEG00000006087	rab11ba	89	92.268	ENSELUG00000019240	-	99	92.268	Esox_lucius
ENSLBEG00000006087	rab11ba	100	94.954	ENSFCAG00000015216	RAB11B	100	94.954	Felis_catus
ENSLBEG00000006087	rab11ba	100	94.954	ENSFDAG00000019872	RAB11B	100	94.954	Fukomys_damarensis
ENSLBEG00000006087	rab11ba	100	96.330	ENSFHEG00000022642	rab11ba	100	96.330	Fundulus_heteroclitus
ENSLBEG00000006087	rab11ba	100	95.413	ENSGMOG00000007390	rab11ba	99	95.413	Gadus_morhua
ENSLBEG00000006087	rab11ba	100	95.872	ENSGAFG00000005679	rab11ba	100	95.872	Gambusia_affinis
ENSLBEG00000006087	rab11ba	100	95.872	ENSGAGG00000012557	-	100	95.872	Gopherus_agassizii
ENSLBEG00000006087	rab11ba	100	94.954	ENSHGLG00000014984	RAB11B	100	94.954	Heterocephalus_glaber_female
ENSLBEG00000006087	rab11ba	100	94.954	ENSHGLG00100003638	RAB11B	100	94.954	Heterocephalus_glaber_male
ENSLBEG00000006087	rab11ba	100	94.954	ENSSTOG00000031571	RAB11B	100	94.954	Ictidomys_tridecemlineatus
ENSLBEG00000006087	rab11ba	100	94.954	ENSJJAG00000018891	Rab11b	100	94.954	Jaculus_jaculus
ENSLBEG00000006087	rab11ba	100	96.330	ENSKMAG00000006082	-	100	96.330	Kryptolebias_marmoratus
ENSLBEG00000006087	rab11ba	78	98.824	ENSLACG00000016974	RAB11B	99	98.824	Latimeria_chalumnae
ENSLBEG00000006087	rab11ba	100	94.954	ENSLAFG00000013598	RAB11B	100	94.954	Loxodonta_africana
ENSLBEG00000006087	rab11ba	100	94.954	ENSMNEG00000039759	-	100	94.954	Macaca_nemestrina
ENSLBEG00000006087	rab11ba	100	96.789	ENSMAMG00000018556	rab11ba	100	96.789	Mastacembelus_armatus
ENSLBEG00000006087	rab11ba	100	94.495	ENSMZEG00005010947	rab11ba	100	94.495	Maylandia_zebra
ENSLBEG00000006087	rab11ba	99	83.796	ENSMZEG00005019251	-	97	83.796	Maylandia_zebra
ENSLBEG00000006087	rab11ba	100	95.413	ENSMAUG00000021579	Rab11b	100	95.413	Mesocricetus_auratus
ENSLBEG00000006087	rab11ba	100	94.954	ENSMOCG00000012667	Rab11b	100	94.954	Microtus_ochrogaster
ENSLBEG00000006087	rab11ba	100	92.661	ENSMALG00000021949	rab11ba	100	92.661	Monopterus_albus
ENSLBEG00000006087	rab11ba	100	94.954	MGP_CAROLIEiJ_G0021415	Rab11b	99	96.622	Mus_caroli
ENSLBEG00000006087	rab11ba	100	94.954	ENSMUSG00000077450	Rab11b	99	96.622	Mus_musculus
ENSLBEG00000006087	rab11ba	100	94.954	MGP_PahariEiJ_G0020420	Rab11b	100	94.954	Mus_pahari
ENSLBEG00000006087	rab11ba	100	94.954	MGP_SPRETEiJ_G0022327	Rab11b	99	96.622	Mus_spretus
ENSLBEG00000006087	rab11ba	100	94.954	ENSMPUG00000007263	RAB11B	100	94.954	Mustela_putorius_furo
ENSLBEG00000006087	rab11ba	100	90.498	ENSMLUG00000002308	-	100	90.498	Myotis_lucifugus
ENSLBEG00000006087	rab11ba	100	94.954	ENSNGAG00000015757	Rab11b	100	94.954	Nannospalax_galili
ENSLBEG00000006087	rab11ba	100	94.954	ENSNBRG00000023898	rab11ba	84	94.954	Neolamprologus_brichardi
ENSLBEG00000006087	rab11ba	100	94.954	ENSNLEG00000001733	RAB11B	100	94.954	Nomascus_leucogenys
ENSLBEG00000006087	rab11ba	100	94.954	ENSODEG00000011371	RAB11B	100	94.954	Octodon_degus
ENSLBEG00000006087	rab11ba	100	95.413	ENSONIG00000002535	rab11ba	100	95.413	Oreochromis_niloticus
ENSLBEG00000006087	rab11ba	92	81.910	ENSOCUG00000028208	RAB11B	83	77.674	Oryctolagus_cuniculus
ENSLBEG00000006087	rab11ba	99	95.392	ENSORLG00000015307	rab11ba	99	95.392	Oryzias_latipes
ENSLBEG00000006087	rab11ba	99	95.392	ENSORLG00020020816	rab11ba	99	95.392	Oryzias_latipes_hni
ENSLBEG00000006087	rab11ba	99	95.370	ENSORLG00015016946	rab11ba	86	90.909	Oryzias_latipes_hsok
ENSLBEG00000006087	rab11ba	99	95.392	ENSOMEG00000002581	rab11ba	99	95.392	Oryzias_melastigma
ENSLBEG00000006087	rab11ba	100	94.954	ENSOGAG00000003227	RAB11B	99	94.954	Otolemur_garnettii
ENSLBEG00000006087	rab11ba	100	94.954	ENSOARG00000003801	RAB11B	97	94.954	Ovis_aries
ENSLBEG00000006087	rab11ba	83	93.889	ENSPPRG00000010160	RAB11B	88	93.889	Panthera_pardus
ENSLBEG00000006087	rab11ba	100	94.954	ENSPEMG00000014536	Rab11b	100	94.954	Peromyscus_maniculatus_bairdii
ENSLBEG00000006087	rab11ba	94	80.000	ENSPMAG00000009335	-	100	80.000	Petromyzon_marinus
ENSLBEG00000006087	rab11ba	100	96.330	ENSPFOG00000006159	rab11ba	100	96.330	Poecilia_formosa
ENSLBEG00000006087	rab11ba	100	96.330	ENSPLAG00000014243	rab11ba	100	96.330	Poecilia_latipinna
ENSLBEG00000006087	rab11ba	100	96.330	ENSPMEG00000007917	rab11ba	77	94.619	Poecilia_mexicana
ENSLBEG00000006087	rab11ba	100	96.330	ENSPREG00000006357	rab11ba	80	95.067	Poecilia_reticulata
ENSLBEG00000006087	rab11ba	100	94.954	ENSPPYG00000009504	RAB11B	100	94.954	Pongo_abelii
ENSLBEG00000006087	rab11ba	100	86.697	ENSPCAG00000016118	RAB11B	100	86.697	Procavia_capensis
ENSLBEG00000006087	rab11ba	67	96.575	ENSPCOG00000008655	-	100	96.575	Propithecus_coquereli
ENSLBEG00000006087	rab11ba	100	94.954	ENSPCOG00000028053	RAB11B	100	94.954	Propithecus_coquereli
ENSLBEG00000006087	rab11ba	100	94.954	ENSPVAG00000009645	RAB11B	100	94.954	Pteropus_vampyrus
ENSLBEG00000006087	rab11ba	100	94.495	ENSPNYG00000019644	rab11ba	100	94.495	Pundamilia_nyererei
ENSLBEG00000006087	rab11ba	94	78.537	ENSPNYG00000023810	-	90	78.537	Pundamilia_nyererei
ENSLBEG00000006087	rab11ba	100	95.413	ENSPNAG00000020475	rab11ba	100	95.413	Pygocentrus_nattereri
ENSLBEG00000006087	rab11ba	100	95.413	ENSPNAG00000006431	-	100	95.413	Pygocentrus_nattereri
ENSLBEG00000006087	rab11ba	100	94.954	ENSRNOG00000007648	Rab11b	100	94.954	Rattus_norvegicus
ENSLBEG00000006087	rab11ba	100	94.954	ENSSBOG00000035094	RAB11B	100	94.954	Saimiri_boliviensis_boliviensis
ENSLBEG00000006087	rab11ba	100	96.330	ENSSDUG00000002965	rab11ba	100	96.330	Seriola_dumerili
ENSLBEG00000006087	rab11ba	100	96.330	ENSSLDG00000005221	rab11ba	100	96.330	Seriola_lalandi_dorsalis
ENSLBEG00000006087	rab11ba	100	97.248	ENSSPAG00000017313	rab11ba	100	97.248	Stegastes_partitus
ENSLBEG00000006087	rab11ba	100	94.954	ENSSSCG00000013600	RAB11B	100	94.954	Sus_scrofa
ENSLBEG00000006087	rab11ba	59	98.450	ENSTBEG00000014750	-	100	98.450	Tupaia_belangeri
ENSLBEG00000006087	rab11ba	100	94.954	ENSTTRG00000009758	RAB11B	100	94.954	Tursiops_truncatus
ENSLBEG00000006087	rab11ba	94	77.073	ENSUMAG00000014594	RAB11B	97	77.073	Ursus_maritimus
ENSLBEG00000006087	rab11ba	100	94.954	ENSVVUG00000025210	RAB11B	100	94.954	Vulpes_vulpes
ENSLBEG00000006087	rab11ba	100	92.202	ENSXETG00000021890	rab11b.2	99	92.202	Xenopus_tropicalis
ENSLBEG00000006087	rab11ba	61	98.496	ENSXCOG00000009194	-	98	98.496	Xiphophorus_couchianus
ENSLBEG00000006087	rab11ba	100	95.872	ENSXMAG00000013416	rab11ba	100	95.872	Xiphophorus_maculatus