EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000006152 (Gene tree)
Gene ID: 109996372
Gene Symbol: -
Alias: -
Full Name: ras-related protein Rab-7L1-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 6569 bases
Position: chrFKLU01000362.1:134135-140703
Accession: 109996372
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000007981	MMR_HSR1	PF01926.23	2.7e-05	1	1
ENSLBEP00000007972	MMR_HSR1	PF01926.23	5.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000008388	-	1473	XM_020650453	ENSLBEP00000007981	205 (aa)	XP_020506109	UPI0009B467B6
ENSLBET00000008379	-	597	-	ENSLBEP00000007972	198 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000006152's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000006152's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000006152	-	81	33.533	ENSLBEG00000016446	rab25b	77	33.533
ENSLBEG00000006152	-	86	35.838	ENSLBEG00000027781	rab1ab	81	36.257
ENSLBEG00000006152	-	94	35.567	ENSLBEG00000013463	rab15	84	35.567
ENSLBEG00000006152	-	99	31.863	ENSLBEG00000021040	rab1ba	98	31.863
ENSLBEG00000006152	-	81	33.951	ENSLBEG00000002367	rab25a	75	33.533
ENSLBEG00000006152	-	90	34.595	ENSLBEG00000003101	rab4a	83	34.595
ENSLBEG00000006152	-	98	34.158	ENSLBEG00000017798	-	96	34.158
ENSLBEG00000006152	-	80	33.750	ENSLBEG00000015248	rab11bb	71	33.750
ENSLBEG00000006152	-	55	31.304	ENSLBEG00000025705	si:ch73-116o1.2	76	30.909
ENSLBEG00000006152	-	99	30.909	ENSLBEG00000002926	si:dkey-34d22.5	97	30.909
ENSLBEG00000006152	-	82	32.121	ENSLBEG00000003235	rab22a	81	32.121
ENSLBEG00000006152	-	89	36.022	ENSLBEG00000001146	rab30	89	36.022
ENSLBEG00000006152	-	85	32.571	ENSLBEG00000016417	rab11al	80	32.759
ENSLBEG00000006152	-	57	32.143	ENSLBEG00000019016	arl8bb	57	32.143
ENSLBEG00000006152	-	85	36.571	ENSLBEG00000005128	-	78	36.571
ENSLBEG00000006152	-	85	30.286	ENSLBEG00000005981	-	85	30.216
ENSLBEG00000006152	-	78	37.500	ENSLBEG00000018063	-	64	37.500
ENSLBEG00000006152	-	86	36.723	ENSLBEG00000011478	rab9b	81	36.723
ENSLBEG00000006152	-	85	37.500	ENSLBEG00000018180	si:dkey-13a21.4	82	36.905
ENSLBEG00000006152	-	97	31.156	ENSLBEG00000019428	rab18b	93	31.156
ENSLBEG00000006152	-	79	37.342	ENSLBEG00000004128	rab5c	69	37.342
ENSLBEG00000006152	-	90	33.871	ENSLBEG00000008746	RAB41	85	33.871
ENSLBEG00000006152	-	97	36.406	ENSLBEG00000026777	rab33ba	87	36.406
ENSLBEG00000006152	-	83	38.012	ENSLBEG00000026779	rab13	83	38.012
ENSLBEG00000006152	-	80	32.934	ENSLBEG00000019137	rhebl1	82	32.934
ENSLBEG00000006152	-	84	35.119	ENSLBEG00000005791	-	76	34.320
ENSLBEG00000006152	-	82	38.462	ENSLBEG00000013756	rab12	83	35.071
ENSLBEG00000006152	-	84	36.416	ENSLBEG00000022630	-	79	36.416
ENSLBEG00000006152	-	98	36.816	ENSLBEG00000020582	rab9a	97	36.816
ENSLBEG00000006152	-	83	35.152	ENSLBEG00000001193	rab42a	76	34.911
ENSLBEG00000006152	-	78	37.888	ENSLBEG00000014427	rab33a	68	37.888
ENSLBEG00000006152	-	96	34.500	ENSLBEG00000025798	zgc:101559	83	34.500
ENSLBEG00000006152	-	83	34.884	ENSLBEG00000026989	RAB15	78	34.884
ENSLBEG00000006152	-	80	32.099	ENSLBEG00000003644	rabl2	67	32.099
ENSLBEG00000006152	-	96	32.663	ENSLBEG00000027539	-	86	32.663
ENSLBEG00000006152	-	84	36.994	ENSLBEG00000007681	si:dkey-16l2.16	97	33.971
ENSLBEG00000006152	-	86	31.319	ENSLBEG00000014885	rheb	93	31.319
ENSLBEG00000006152	-	85	34.911	ENSLBEG00000027226	-	70	34.118
ENSLBEG00000006152	-	69	30.147	ENSLBEG00000022310	arl8ba	59	30.147
ENSLBEG00000006152	-	81	37.037	ENSLBEG00000001313	RAB39B	78	35.882
ENSLBEG00000006152	-	98	32.394	ENSLBEG00000026790	-	96	32.394
ENSLBEG00000006152	-	82	34.146	ENSLBEG00000020796	rab2a	98	31.373
ENSLBEG00000006152	-	99	34.314	ENSLBEG00000001618	rab35b	98	34.314
ENSLBEG00000006152	-	99	32.843	ENSLBEG00000028426	RAB1A	98	32.843
ENSLBEG00000006152	-	77	30.061	ENSLBEG00000016218	rasl11a	60	30.061
ENSLBEG00000006152	-	98	31.905	ENSLBEG00000019435	rab14	95	31.905
ENSLBEG00000006152	-	97	30.653	ENSLBEG00000005861	rab18a	91	30.653
ENSLBEG00000006152	-	85	32.571	ENSLBEG00000006087	rab11ba	78	32.571
ENSLBEG00000006152	-	99	30.660	ENSLBEG00000026857	rab11a	95	30.660
ENSLBEG00000006152	-	79	32.099	ENSLBEG00000028391	dnajc27	58	32.099
ENSLBEG00000006152	-	98	34.158	ENSLBEG00000001796	RAB7A	96	34.158
ENSLBEG00000006152	-	79	36.709	ENSLBEG00000010408	-	69	36.709
ENSLBEG00000006152	-	99	43.689	ENSLBEG00000005018	rab32b	95	43.689
ENSLBEG00000006152	-	50	41.414	ENSLBEG00000003369	-	82	41.414
ENSLBEG00000006152	-	98	33.333	ENSLBEG00000003748	rab6a	94	33.333
ENSLBEG00000006152	-	87	34.807	ENSLBEG00000019372	rab6bb	83	34.807
ENSLBEG00000006152	-	81	34.884	ENSLBEG00000013176	rab23	76	38.323
ENSLBEG00000006152	-	79	37.975	ENSLBEG00000002516	rab5aa	67	37.975
ENSLBEG00000006152	-	98	31.343	ENSLBEG00000026930	rab6ba	94	31.343
ENSLBEG00000006152	-	84	32.370	ENSLBEG00000004172	-	77	32.370
ENSLBEG00000006152	-	100	100.000	ENSLBEG00000018812	RAB29	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000006152	-	100	82.524	ENSATEG00000024739	RAB29	100	82.524	Anabas_testudineus
ENSLBEG00000006152	-	82	86.503	ENSACLG00000008602	RAB29	100	86.061	Astatotilapia_calliptera
ENSLBEG00000006152	-	100	74.146	ENSCVAG00000014038	RAB29	99	74.146	Cyprinodon_variegatus
ENSLBEG00000006152	-	98	53.465	ENSEBUG00000002259	RAB29	96	53.465	Eptatretus_burgeri
ENSLBEG00000006152	-	93	67.857	ENSFHEG00000015993	RAB29	96	67.857	Fundulus_heteroclitus
ENSLBEG00000006152	-	83	79.878	ENSGMOG00000018475	RAB29	99	79.878	Gadus_morhua
ENSLBEG00000006152	-	100	73.786	ENSGAFG00000000629	RAB29	100	73.786	Gambusia_affinis
ENSLBEG00000006152	-	100	78.049	ENSGACG00000010473	RAB29	99	78.049	Gasterosteus_aculeatus
ENSLBEG00000006152	-	100	78.744	ENSHBUG00000012594	RAB29	99	78.744	Haplochromis_burtoni
ENSLBEG00000006152	-	99	70.443	ENSKMAG00000017150	-	91	70.443	Kryptolebias_marmoratus
ENSLBEG00000006152	-	99	55.610	ENSLACG00000002523	RAB29	98	55.610	Latimeria_chalumnae
ENSLBEG00000006152	-	100	78.537	ENSMAMG00000006963	RAB29	100	78.537	Mastacembelus_armatus
ENSLBEG00000006152	-	100	77.778	ENSMZEG00005026799	RAB29	99	77.778	Maylandia_zebra
ENSLBEG00000006152	-	100	80.583	ENSMALG00000018436	RAB29	90	80.583	Monopterus_albus
ENSLBEG00000006152	-	83	85.455	ENSNBRG00000008714	RAB29	71	86.957	Neolamprologus_brichardi
ENSLBEG00000006152	-	100	77.404	ENSONIG00000014892	RAB29	100	77.404	Oreochromis_niloticus
ENSLBEG00000006152	-	100	75.122	ENSORLG00000027892	RAB29	99	75.122	Oryzias_latipes
ENSLBEG00000006152	-	100	73.171	ENSORLG00020005240	RAB29	99	73.171	Oryzias_latipes_hni
ENSLBEG00000006152	-	100	74.146	ENSORLG00015020441	-	99	74.146	Oryzias_latipes_hsok
ENSLBEG00000006152	-	100	75.122	ENSOMEG00000000336	RAB29	100	75.122	Oryzias_melastigma
ENSLBEG00000006152	-	100	69.268	ENSPMGG00000008290	-	100	69.268	Periophthalmus_magnuspinnatus
ENSLBEG00000006152	-	100	67.961	ENSPFOG00000013066	RAB29	99	67.961	Poecilia_formosa
ENSLBEG00000006152	-	99	67.980	ENSPLAG00000002600	RAB29	95	67.980	Poecilia_latipinna
ENSLBEG00000006152	-	100	68.932	ENSPMEG00000021807	RAB29	100	68.932	Poecilia_mexicana
ENSLBEG00000006152	-	100	69.903	ENSPREG00000020276	RAB29	100	69.903	Poecilia_reticulata
ENSLBEG00000006152	-	100	77.778	ENSPNYG00000015355	RAB29	99	77.778	Pundamilia_nyererei
ENSLBEG00000006152	-	100	79.227	ENSSDUG00000006543	RAB29	100	79.227	Seriola_dumerili
ENSLBEG00000006152	-	99	55.665	ENSSPUG00000015007	RAB29	98	55.665	Sphenodon_punctatus
ENSLBEG00000006152	-	100	76.214	ENSSPAG00000002062	RAB29	100	76.214	Stegastes_partitus
ENSLBEG00000006152	-	100	71.359	ENSXCOG00000016370	RAB29	100	71.359	Xiphophorus_couchianus
ENSLBEG00000006152	-	100	72.330	ENSXMAG00000029823	RAB29	100	72.330	Xiphophorus_maculatus