EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000006161 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 2456 bases
Position: chrFKLU01001783.1:349-2804
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000007988	zf-C2H2	PF00096.26	3e-12	1	2
ENSLBEP00000007988	zf-C2H2	PF00096.26	3e-12	2	2
ENSLBEP00000008004	zf-C2H2	PF00096.26	3.5e-12	1	2
ENSLBEP00000008004	zf-C2H2	PF00096.26	3.5e-12	2	2
ENSLBEP00000007988	zf-met	PF12874.7	1.2e-09	1	1
ENSLBEP00000008004	zf-met	PF12874.7	1.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000008395	-	684	-	ENSLBEP00000007988	227 (aa)	-	-
ENSLBET00000008411	-	684	-	ENSLBEP00000008004	227 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000006161's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000006161's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000006161	-	72	46.341	ENSLBEG00000004833	-	68	46.341
ENSLBEG00000006161	-	88	44.068	ENSLBEG00000014263	-	73	35.926
ENSLBEG00000006161	-	88	50.909	ENSLBEG00000011091	si:cabz01071911.3	97	50.909
ENSLBEG00000006161	-	95	43.850	ENSLBEG00000013570	-	99	48.077
ENSLBEG00000006161	-	74	30.088	ENSLBEG00000002594	-	57	32.692
ENSLBEG00000006161	-	91	48.485	ENSLBEG00000004867	-	90	48.485
ENSLBEG00000006161	-	85	41.346	ENSLBEG00000005307	znf236	61	41.346
ENSLBEG00000006161	-	85	48.148	ENSLBEG00000021260	-	84	48.148
ENSLBEG00000006161	-	72	47.561	ENSLBEG00000004892	-	76	47.561
ENSLBEG00000006161	-	91	37.952	ENSLBEG00000008689	-	85	41.615
ENSLBEG00000006161	-	98	46.774	ENSLBEG00000018970	-	84	46.774
ENSLBEG00000006161	-	90	35.533	ENSLBEG00000011133	ZNF384	50	35.533
ENSLBEG00000006161	-	91	47.573	ENSLBEG00000009567	-	92	47.573
ENSLBEG00000006161	-	82	37.423	ENSLBEG00000005729	znf652	83	34.328
ENSLBEG00000006161	-	91	46.207	ENSLBEG00000000393	-	88	46.207
ENSLBEG00000006161	-	92	37.113	ENSLBEG00000013235	-	83	37.113
ENSLBEG00000006161	-	89	41.772	ENSLBEG00000008115	-	90	46.914
ENSLBEG00000006161	-	91	46.061	ENSLBEG00000000343	-	97	46.061
ENSLBEG00000006161	-	84	49.573	ENSLBEG00000025696	-	78	46.988
ENSLBEG00000006161	-	91	43.713	ENSLBEG00000011210	-	71	43.713
ENSLBEG00000006161	-	78	50.000	ENSLBEG00000008909	-	93	55.882
ENSLBEG00000006161	-	89	43.452	ENSLBEG00000020747	-	90	43.452
ENSLBEG00000006161	-	83	43.396	ENSLBEG00000008733	-	67	35.377
ENSLBEG00000006161	-	80	35.333	ENSLBEG00000005715	-	72	36.364
ENSLBEG00000006161	-	90	36.667	ENSLBEG00000014676	-	73	36.667
ENSLBEG00000006161	-	74	41.111	ENSLBEG00000012947	-	90	42.593
ENSLBEG00000006161	-	69	49.333	ENSLBEG00000025139	-	61	49.333
ENSLBEG00000006161	-	91	100.000	ENSLBEG00000010278	-	94	100.000
ENSLBEG00000006161	-	80	42.000	ENSLBEG00000013197	PRDM15	51	42.000
ENSLBEG00000006161	-	89	39.634	ENSLBEG00000015694	-	94	37.063
ENSLBEG00000006161	-	95	46.087	ENSLBEG00000000435	-	85	46.087
ENSLBEG00000006161	-	86	48.148	ENSLBEG00000006924	-	99	45.062
ENSLBEG00000006161	-	91	43.046	ENSLBEG00000014211	-	97	43.046
ENSLBEG00000006161	-	72	38.406	ENSLBEG00000020297	gfi1b	63	38.406
ENSLBEG00000006161	-	96	37.158	ENSLBEG00000001920	-	87	43.089
ENSLBEG00000006161	-	81	36.970	ENSLBEG00000019067	zbtb47b	55	39.091
ENSLBEG00000006161	-	84	52.830	ENSLBEG00000001756	-	98	52.830
ENSLBEG00000006161	-	84	38.889	ENSLBEG00000028243	-	81	39.355
ENSLBEG00000006161	-	92	46.957	ENSLBEG00000008850	-	77	43.137
ENSLBEG00000006161	-	93	45.390	ENSLBEG00000024509	-	97	47.879
ENSLBEG00000006161	-	91	42.857	ENSLBEG00000008606	-	90	51.163
ENSLBEG00000006161	-	83	40.769	ENSLBEG00000028628	znf1174	56	40.769
ENSLBEG00000006161	-	95	45.513	ENSLBEG00000002278	-	66	51.456
ENSLBEG00000006161	-	93	42.169	ENSLBEG00000020128	-	94	44.068
ENSLBEG00000006161	-	94	42.857	ENSLBEG00000009580	-	76	44.737
ENSLBEG00000006161	-	97	45.000	ENSLBEG00000001132	-	85	45.000
ENSLBEG00000006161	-	91	46.061	ENSLBEG00000011289	-	81	46.061
ENSLBEG00000006161	-	76	55.556	ENSLBEG00000022059	-	87	43.750
ENSLBEG00000006161	-	86	57.500	ENSLBEG00000024737	-	91	56.962
ENSLBEG00000006161	-	91	49.697	ENSLBEG00000000373	-	92	49.697
ENSLBEG00000006161	-	93	45.455	ENSLBEG00000007837	-	82	45.455
ENSLBEG00000006161	-	91	36.232	ENSLBEG00000015264	-	79	38.272
ENSLBEG00000006161	-	86	35.838	ENSLBEG00000028271	-	84	35.838
ENSLBEG00000006161	-	80	36.612	ENSLBEG00000011986	-	90	36.612
ENSLBEG00000006161	-	77	57.500	ENSLBEG00000007937	-	62	57.500
ENSLBEG00000006161	-	91	44.545	ENSLBEG00000014282	-	100	44.545
ENSLBEG00000006161	-	78	35.714	ENSLBEG00000017424	-	95	37.500
ENSLBEG00000006161	-	94	41.860	ENSLBEG00000026457	-	99	41.860
ENSLBEG00000006161	-	73	47.674	ENSLBEG00000020461	-	89	31.004
ENSLBEG00000006161	-	93	32.308	ENSLBEG00000008439	znf319b	73	34.731
ENSLBEG00000006161	-	91	36.957	ENSLBEG00000024454	-	51	38.650
ENSLBEG00000006161	-	56	47.872	ENSLBEG00000024458	-	76	47.872
ENSLBEG00000006161	-	92	40.351	ENSLBEG00000025689	-	85	40.351
ENSLBEG00000006161	-	58	33.571	ENSLBEG00000000972	snai2	56	33.571
ENSLBEG00000006161	-	71	50.000	ENSLBEG00000011588	-	62	50.000
ENSLBEG00000006161	-	89	37.267	ENSLBEG00000022939	-	58	37.267
ENSLBEG00000006161	-	91	73.006	ENSLBEG00000011006	-	76	73.006
ENSLBEG00000006161	-	97	48.684	ENSLBEG00000002357	-	99	44.910
ENSLBEG00000006161	-	86	44.828	ENSLBEG00000017450	-	81	46.617
ENSLBEG00000006161	-	91	30.612	ENSLBEG00000025305	-	86	30.612
ENSLBEG00000006161	-	91	49.697	ENSLBEG00000011250	-	93	49.697
ENSLBEG00000006161	-	82	42.708	ENSLBEG00000017726	-	75	42.708
ENSLBEG00000006161	-	91	55.000	ENSLBEG00000011465	-	85	55.000
ENSLBEG00000006161	-	91	46.897	ENSLBEG00000011349	-	76	46.897
ENSLBEG00000006161	-	78	38.217	ENSLBEG00000008320	-	65	39.103
ENSLBEG00000006161	-	86	45.752	ENSLBEG00000012201	-	59	51.163
ENSLBEG00000006161	-	94	34.884	ENSLBEG00000014195	-	52	34.884
ENSLBEG00000006161	-	82	40.606	ENSLBEG00000007106	-	65	41.259
ENSLBEG00000006161	-	84	38.411	ENSLBEG00000022736	prdm5	70	38.411
ENSLBEG00000006161	-	89	48.168	ENSLBEG00000011145	si:cabz01071911.3	76	53.636
ENSLBEG00000006161	-	54	32.787	ENSLBEG00000026573	-	72	31.098
ENSLBEG00000006161	-	91	47.273	ENSLBEG00000007251	-	73	47.273
ENSLBEG00000006161	-	73	42.222	ENSLBEG00000010132	-	88	42.222
ENSLBEG00000006161	-	93	31.915	ENSLBEG00000012438	ZNF319	96	33.133
ENSLBEG00000006161	-	90	33.468	ENSLBEG00000024536	-	88	33.468
ENSLBEG00000006161	-	79	30.303	ENSLBEG00000027993	-	68	30.303
ENSLBEG00000006161	-	91	47.586	ENSLBEG00000004805	-	97	47.586
ENSLBEG00000006161	-	85	44.512	ENSLBEG00000011028	-	75	44.512
ENSLBEG00000006161	-	91	48.077	ENSLBEG00000011313	-	86	48.077
ENSLBEG00000006161	-	89	36.970	ENSLBEG00000018509	-	90	38.235
ENSLBEG00000006161	-	91	44.578	ENSLBEG00000000369	-	99	44.578
ENSLBEG00000006161	-	90	50.000	ENSLBEG00000010165	-	92	47.059
ENSLBEG00000006161	-	63	31.304	ENSLBEG00000015419	scrt2	56	31.304

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000006161	-	89	49.438	ENSAPOG00000018429	-	65	46.970	Acanthochromis_polyacanthus
ENSLBEG00000006161	-	80	46.078	ENSAPOG00000008319	-	52	46.078	Acanthochromis_polyacanthus
ENSLBEG00000006161	-	92	41.333	ENSAPOG00000019138	-	78	41.333	Acanthochromis_polyacanthus
ENSLBEG00000006161	-	70	36.585	ENSACIG00000017892	-	72	36.585	Amphilophus_citrinellus
ENSLBEG00000006161	-	88	33.696	ENSACIG00000002944	-	50	35.135	Amphilophus_citrinellus
ENSLBEG00000006161	-	79	38.235	ENSAOCG00000001325	-	76	38.235	Amphiprion_ocellaris
ENSLBEG00000006161	-	57	31.579	ENSAOCG00000006744	-	71	31.579	Amphiprion_ocellaris
ENSLBEG00000006161	-	92	41.333	ENSAOCG00000016897	-	72	41.333	Amphiprion_ocellaris
ENSLBEG00000006161	-	90	42.771	ENSAPEG00000018762	-	55	42.771	Amphiprion_percula
ENSLBEG00000006161	-	92	41.333	ENSAPEG00000001556	-	72	41.333	Amphiprion_percula
ENSLBEG00000006161	-	83	40.845	ENSAPEG00000010013	-	65	40.845	Amphiprion_percula
ENSLBEG00000006161	-	87	42.500	ENSATEG00000018931	-	93	42.400	Anabas_testudineus
ENSLBEG00000006161	-	86	39.241	ENSACLG00000005694	-	56	39.241	Astatotilapia_calliptera
ENSLBEG00000006161	-	72	42.623	ENSACLG00000011658	-	79	42.623	Astatotilapia_calliptera
ENSLBEG00000006161	-	73	54.545	ENSAMXG00000029518	-	51	56.098	Astyanax_mexicanus
ENSLBEG00000006161	-	77	41.176	ENSCING00000002128	zf(c2h2)-35	62	44.262	Ciona_intestinalis
ENSLBEG00000006161	-	81	48.092	ENSCSEG00000010453	-	65	48.092	Cynoglossus_semilaevis
ENSLBEG00000006161	-	72	48.750	ENSCSEG00000015593	-	89	48.750	Cynoglossus_semilaevis
ENSLBEG00000006161	-	71	42.424	ENSCSEG00000010264	-	58	42.424	Cynoglossus_semilaevis
ENSLBEG00000006161	-	87	44.872	ENSCVAG00000012682	-	78	44.872	Cyprinodon_variegatus
ENSLBEG00000006161	-	83	42.537	ENSCVAG00000003250	-	62	42.537	Cyprinodon_variegatus
ENSLBEG00000006161	-	90	43.357	ENSCVAG00000015616	-	90	43.357	Cyprinodon_variegatus
ENSLBEG00000006161	-	89	39.881	ENSCVAG00000006653	-	60	42.520	Cyprinodon_variegatus
ENSLBEG00000006161	-	91	40.244	ENSCVAG00000020141	-	75	40.244	Cyprinodon_variegatus
ENSLBEG00000006161	-	77	36.145	ENSEBUG00000011449	-	84	36.145	Eptatretus_burgeri
ENSLBEG00000006161	-	88	37.059	ENSEBUG00000002290	-	67	37.059	Eptatretus_burgeri
ENSLBEG00000006161	-	76	37.719	ENSEBUG00000007931	-	62	37.719	Eptatretus_burgeri
ENSLBEG00000006161	-	86	38.983	ENSELUG00000001909	-	78	32.386	Esox_lucius
ENSLBEG00000006161	-	83	47.423	ENSELUG00000024007	-	58	50.602	Esox_lucius
ENSLBEG00000006161	-	89	42.969	ENSFHEG00000023184	-	67	42.969	Fundulus_heteroclitus
ENSLBEG00000006161	-	93	31.492	ENSGAFG00000012545	-	65	31.492	Gambusia_affinis
ENSLBEG00000006161	-	83	41.573	ENSGAFG00000008204	-	65	42.424	Gambusia_affinis
ENSLBEG00000006161	-	72	39.535	ENSGAFG00000001879	-	56	39.535	Gambusia_affinis
ENSLBEG00000006161	-	78	51.613	ENSGAFG00000007528	-	68	51.613	Gambusia_affinis
ENSLBEG00000006161	-	85	38.562	ENSHBUG00000006656	-	69	38.562	Haplochromis_burtoni
ENSLBEG00000006161	-	88	47.872	ENSHCOG00000013489	-	88	47.872	Hippocampus_comes
ENSLBEG00000006161	-	91	47.500	ENSHCOG00000015497	-	88	45.181	Hippocampus_comes
ENSLBEG00000006161	-	72	41.558	ENSHCOG00000020670	-	73	41.558	Hippocampus_comes
ENSLBEG00000006161	-	90	39.103	ENSHCOG00000019389	-	75	39.103	Hippocampus_comes
ENSLBEG00000006161	-	93	45.926	ENSHCOG00000008550	-	54	48.592	Hippocampus_comes
ENSLBEG00000006161	-	93	45.926	ENSHCOG00000001873	-	54	48.592	Hippocampus_comes
ENSLBEG00000006161	-	95	40.331	ENSHCOG00000008213	-	75	40.331	Hippocampus_comes
ENSLBEG00000006161	-	93	36.111	ENSHCOG00000008227	-	73	36.111	Hippocampus_comes
ENSLBEG00000006161	-	93	32.778	ENSKMAG00000007699	-	72	32.778	Kryptolebias_marmoratus
ENSLBEG00000006161	-	76	33.663	ENSKMAG00000014184	-	53	35.897	Kryptolebias_marmoratus
ENSLBEG00000006161	-	90	37.209	ENSKMAG00000021873	-	52	37.209	Kryptolebias_marmoratus
ENSLBEG00000006161	-	93	41.566	ENSLOCG00000004208	-	99	41.566	Lepisosteus_oculatus
ENSLBEG00000006161	-	91	37.799	ENSMAMG00000017939	-	91	37.799	Mastacembelus_armatus
ENSLBEG00000006161	-	85	37.838	ENSMZEG00005013907	-	78	37.838	Maylandia_zebra
ENSLBEG00000006161	-	90	49.057	ENSMMOG00000017592	-	72	36.486	Mola_mola
ENSLBEG00000006161	-	69	38.806	ENSMMOG00000013330	-	53	38.806	Mola_mola
ENSLBEG00000006161	-	82	46.316	ENSMALG00000004279	-	77	46.316	Monopterus_albus
ENSLBEG00000006161	-	81	45.977	ENSNBRG00000006112	-	53	45.977	Neolamprologus_brichardi
ENSLBEG00000006161	-	81	44.068	ENSONIG00000005050	-	66	44.068	Oreochromis_niloticus
ENSLBEG00000006161	-	79	39.394	ENSONIG00000007967	-	55	39.394	Oreochromis_niloticus
ENSLBEG00000006161	-	95	37.405	ENSORLG00000002268	-	87	37.405	Oryzias_latipes
ENSLBEG00000006161	-	89	34.884	ENSORLG00000021885	-	81	49.057	Oryzias_latipes
ENSLBEG00000006161	-	83	48.052	ENSORLG00020019227	-	50	48.052	Oryzias_latipes_hni
ENSLBEG00000006161	-	91	40.127	ENSORLG00020018921	-	94	41.212	Oryzias_latipes_hni
ENSLBEG00000006161	-	79	37.069	ENSORLG00015018099	-	67	37.069	Oryzias_latipes_hsok
ENSLBEG00000006161	-	72	44.595	ENSOMEG00000005578	-	68	44.595	Oryzias_melastigma
ENSLBEG00000006161	-	91	42.308	ENSPKIG00000005164	-	55	42.308	Paramormyrops_kingsleyae
ENSLBEG00000006161	-	74	40.288	ENSPMGG00000002455	-	88	40.288	Periophthalmus_magnuspinnatus
ENSLBEG00000006161	-	84	39.437	ENSPMGG00000009571	-	83	39.437	Periophthalmus_magnuspinnatus
ENSLBEG00000006161	-	74	34.234	ENSPMGG00000019750	-	80	34.234	Periophthalmus_magnuspinnatus
ENSLBEG00000006161	-	74	47.664	ENSPMGG00000002659	-	66	47.664	Periophthalmus_magnuspinnatus
ENSLBEG00000006161	-	90	44.776	ENSPMGG00000002661	-	87	44.776	Periophthalmus_magnuspinnatus
ENSLBEG00000006161	-	77	41.176	ENSPMGG00000006928	-	55	41.176	Periophthalmus_magnuspinnatus
ENSLBEG00000006161	-	80	30.178	ENSPMAG00000004189	-	99	30.769	Petromyzon_marinus
ENSLBEG00000006161	-	84	39.175	ENSPMAG00000000839	-	99	41.667	Petromyzon_marinus
ENSLBEG00000006161	-	89	31.515	ENSPMAG00000002022	-	100	32.039	Petromyzon_marinus
ENSLBEG00000006161	-	97	39.157	ENSPFOG00000018860	-	99	40.196	Poecilia_formosa
ENSLBEG00000006161	-	92	43.269	ENSPFOG00000009491	-	72	43.269	Poecilia_formosa
ENSLBEG00000006161	-	77	39.759	ENSPLAG00000010067	-	68	40.828	Poecilia_latipinna
ENSLBEG00000006161	-	83	41.379	ENSPLAG00000014832	-	75	41.379	Poecilia_latipinna
ENSLBEG00000006161	-	90	45.038	ENSPLAG00000008941	-	88	45.038	Poecilia_latipinna
ENSLBEG00000006161	-	83	41.379	ENSPMEG00000005210	-	75	41.379	Poecilia_mexicana
ENSLBEG00000006161	-	91	33.333	ENSPMEG00000002953	-	74	31.361	Poecilia_mexicana
ENSLBEG00000006161	-	92	43.269	ENSPMEG00000024117	-	72	43.269	Poecilia_mexicana
ENSLBEG00000006161	-	72	42.105	ENSPREG00000002603	-	60	42.105	Poecilia_reticulata
ENSLBEG00000006161	-	91	32.973	ENSPREG00000008907	-	65	32.973	Poecilia_reticulata
ENSLBEG00000006161	-	78	40.217	ENSPREG00000009488	-	90	43.011	Poecilia_reticulata
ENSLBEG00000006161	-	73	43.382	ENSPNYG00000017888	-	59	41.259	Pundamilia_nyererei
ENSLBEG00000006161	-	82	36.364	ENSPNAG00000005946	-	95	36.364	Pygocentrus_nattereri
ENSLBEG00000006161	-	81	40.000	ENSSFOG00015011531	-	77	40.000	Scleropages_formosus
ENSLBEG00000006161	-	93	46.078	ENSSMAG00000008308	-	57	46.078	Scophthalmus_maximus
ENSLBEG00000006161	-	88	37.589	ENSSMAG00000013291	-	97	42.857	Scophthalmus_maximus
ENSLBEG00000006161	-	90	49.091	ENSSDUG00000020774	-	74	49.091	Seriola_dumerili
ENSLBEG00000006161	-	89	34.266	ENSSLDG00000014436	-	69	34.266	Seriola_lalandi_dorsalis
ENSLBEG00000006161	-	91	41.353	ENSSPAG00000011544	-	51	41.353	Stegastes_partitus
ENSLBEG00000006161	-	91	46.250	ENSSPAG00000005770	-	56	46.250	Stegastes_partitus
ENSLBEG00000006161	-	78	41.600	ENSSPAG00000011533	-	82	41.600	Stegastes_partitus
ENSLBEG00000006161	-	90	50.000	ENSXETG00000012506	znf91	99	46.667	Xenopus_tropicalis
ENSLBEG00000006161	-	81	45.714	ENSXCOG00000020768	-	75	45.714	Xiphophorus_couchianus
ENSLBEG00000006161	-	90	40.000	ENSXCOG00000003441	-	85	40.000	Xiphophorus_couchianus
ENSLBEG00000006161	-	67	39.785	ENSXCOG00000000254	-	58	39.785	Xiphophorus_couchianus
ENSLBEG00000006161	-	82	40.351	ENSXMAG00000012936	-	76	41.860	Xiphophorus_maculatus