EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000006177 (Gene tree)
Gene ID: 109983098
Gene Symbol: arl5c
Alias: zgc:77751
Full Name: ADP-ribosylation factor-like protein 5C
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 3645 bases
Position: chrFKLU01000050.1:1109872-1113516
Accession: 109983098
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000007994	MMR_HSR1	PF01926.23	5.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000008400	-	1821	XM_020632631	ENSLBEP00000007994	208 (aa)	XP_020488287	UPI0009B3D990

Gene Model

Click here to download ENSLBEG00000006177's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000006177's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000006177	arl5c	81	38.547	ENSLBEG00000004752	arfrp1	89	38.547
ENSLBEG00000006177	arl5c	85	38.889	ENSLBEG00000027842	-	88	38.889
ENSLBEG00000006177	arl5c	85	69.318	ENSLBEG00000016471	arl5a	98	69.318
ENSLBEG00000006177	arl5c	73	42.405	ENSLBEG00000011152	arl4d	79	42.405
ENSLBEG00000006177	arl5c	85	45.763	ENSLBEG00000009272	arf2b	98	45.763
ENSLBEG00000006177	arl5c	85	45.763	ENSLBEG00000018992	arf3b	98	45.763
ENSLBEG00000006177	arl5c	80	45.294	ENSLBEG00000000991	arl1	97	45.294
ENSLBEG00000006177	arl5c	60	31.579	ENSLBEG00000003101	rab4a	61	31.579
ENSLBEG00000006177	arl5c	85	47.458	ENSLBEG00000023263	-	98	47.458
ENSLBEG00000006177	arl5c	84	69.714	ENSLBEG00000017173	arl8	98	69.714
ENSLBEG00000006177	arl5c	78	46.296	ENSLBEG00000001998	arf1	92	46.296
ENSLBEG00000006177	arl5c	79	43.293	ENSLBEG00000024782	ARF6	90	43.293
ENSLBEG00000006177	arl5c	83	47.399	ENSLBEG00000012002	-	96	47.399
ENSLBEG00000006177	arl5c	64	31.852	ENSLBEG00000019016	arl8bb	72	31.852
ENSLBEG00000006177	arl5c	72	41.290	ENSLBEG00000021116	arl14	73	41.290
ENSLBEG00000006177	arl5c	79	37.805	ENSLBEG00000027806	arl3l2	88	37.805
ENSLBEG00000006177	arl5c	83	41.040	ENSLBEG00000025929	arl3	95	41.040
ENSLBEG00000006177	arl5c	95	36.041	ENSLBEG00000017331	-	95	38.728
ENSLBEG00000006177	arl5c	85	45.198	ENSLBEG00000026532	arf5	98	45.198
ENSLBEG00000006177	arl5c	76	38.889	ENSLBEG00000010881	ARL6	85	38.889
ENSLBEG00000006177	arl5c	73	43.125	ENSLBEG00000012677	arl4cb	82	43.125
ENSLBEG00000006177	arl5c	73	40.506	ENSLBEG00000013638	arl4aa	86	40.506
ENSLBEG00000006177	arl5c	72	44.000	ENSLBEG00000015748	arl11	84	44.000
ENSLBEG00000006177	arl5c	79	41.818	ENSLBEG00000016494	arl2	90	41.818
ENSLBEG00000006177	arl5c	85	45.763	ENSLBEG00000012046	-	98	45.763
ENSLBEG00000006177	arl5c	85	43.503	ENSLBEG00000027205	-	99	43.503
ENSLBEG00000006177	arl5c	76	39.286	ENSLBEG00000010335	-	86	39.286

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000006177	arl5c	86	90.503	ENSAPOG00000005821	arl5c	100	90.503	Acanthochromis_polyacanthus
ENSLBEG00000006177	arl5c	79	89.634	ENSACIG00000008975	arl5c	91	89.634	Amphilophus_citrinellus
ENSLBEG00000006177	arl5c	86	91.620	ENSAOCG00000010448	arl5c	100	91.620	Amphiprion_ocellaris
ENSLBEG00000006177	arl5c	86	91.620	ENSAPEG00000002699	arl5c	100	91.620	Amphiprion_percula
ENSLBEG00000006177	arl5c	86	85.475	ENSATEG00000000181	arl5c	100	85.475	Anabas_testudineus
ENSLBEG00000006177	arl5c	89	89.730	ENSACLG00000000922	arl5c	100	89.944	Astatotilapia_calliptera
ENSLBEG00000006177	arl5c	86	82.123	ENSAMXG00000031771	arl5c	100	82.123	Astyanax_mexicanus
ENSLBEG00000006177	arl5c	86	82.123	ENSCSEG00000009845	arl5c	100	82.123	Cynoglossus_semilaevis
ENSLBEG00000006177	arl5c	86	88.268	ENSCVAG00000012706	arl5c	100	88.268	Cyprinodon_variegatus
ENSLBEG00000006177	arl5c	86	80.447	ENSDARG00000035719	arl5c	100	80.447	Danio_rerio
ENSLBEG00000006177	arl5c	86	84.358	ENSELUG00000016864	arl5c	100	84.358	Esox_lucius
ENSLBEG00000006177	arl5c	86	88.827	ENSFHEG00000013677	arl5c	100	88.827	Fundulus_heteroclitus
ENSLBEG00000006177	arl5c	86	88.268	ENSGAFG00000002547	arl5c	100	88.268	Gambusia_affinis
ENSLBEG00000006177	arl5c	99	80.097	ENSGACG00000009321	arl5c	100	89.385	Gasterosteus_aculeatus
ENSLBEG00000006177	arl5c	86	89.944	ENSHBUG00000007301	arl5c	100	89.944	Haplochromis_burtoni
ENSLBEG00000006177	arl5c	86	82.682	ENSHCOG00000017576	-	100	82.682	Hippocampus_comes
ENSLBEG00000006177	arl5c	86	81.006	ENSIPUG00000023232	arl5c	100	81.006	Ictalurus_punctatus
ENSLBEG00000006177	arl5c	86	88.268	ENSKMAG00000011323	arl5c	100	88.268	Kryptolebias_marmoratus
ENSLBEG00000006177	arl5c	86	87.151	ENSMAMG00000022157	arl5c	100	87.151	Mastacembelus_armatus
ENSLBEG00000006177	arl5c	86	89.944	ENSMZEG00005022925	arl5c	100	89.944	Maylandia_zebra
ENSLBEG00000006177	arl5c	79	91.463	ENSMMOG00000020851	arl5c	96	91.463	Mola_mola
ENSLBEG00000006177	arl5c	79	89.634	ENSMALG00000009306	arl5c	93	89.634	Monopterus_albus
ENSLBEG00000006177	arl5c	86	90.503	ENSNBRG00000020245	arl5c	100	90.503	Neolamprologus_brichardi
ENSLBEG00000006177	arl5c	87	89.444	ENSONIG00000000890	arl5c	100	89.444	Oreochromis_niloticus
ENSLBEG00000006177	arl5c	86	85.475	ENSORLG00000002960	arl5c	100	85.976	Oryzias_latipes
ENSLBEG00000006177	arl5c	86	85.475	ENSORLG00020010074	arl5c	100	85.976	Oryzias_latipes_hni
ENSLBEG00000006177	arl5c	86	85.475	ENSORLG00015002752	arl5c	100	85.976	Oryzias_latipes_hsok
ENSLBEG00000006177	arl5c	83	86.127	ENSOMEG00000021718	arl5c	98	86.127	Oryzias_melastigma
ENSLBEG00000006177	arl5c	86	82.682	ENSPKIG00000021727	arl5c	100	82.682	Paramormyrops_kingsleyae
ENSLBEG00000006177	arl5c	86	88.827	ENSPFOG00000007842	arl5c	99	88.827	Poecilia_formosa
ENSLBEG00000006177	arl5c	86	88.268	ENSPLAG00000002394	arl5c	100	88.268	Poecilia_latipinna
ENSLBEG00000006177	arl5c	78	90.184	ENSPMEG00000000631	arl5c	94	90.184	Poecilia_mexicana
ENSLBEG00000006177	arl5c	86	89.385	ENSPREG00000008730	arl5c	100	89.385	Poecilia_reticulata
ENSLBEG00000006177	arl5c	86	89.944	ENSPNYG00000012720	arl5c	100	89.944	Pundamilia_nyererei
ENSLBEG00000006177	arl5c	86	81.006	ENSPNAG00000002310	arl5c	100	81.006	Pygocentrus_nattereri
ENSLBEG00000006177	arl5c	86	82.123	ENSSFOG00015023529	arl5c	100	82.123	Scleropages_formosus
ENSLBEG00000006177	arl5c	86	90.503	ENSSMAG00000010552	arl5c	100	90.503	Scophthalmus_maximus
ENSLBEG00000006177	arl5c	86	86.592	ENSSDUG00000022640	arl5c	100	86.592	Seriola_dumerili
ENSLBEG00000006177	arl5c	86	86.592	ENSSLDG00000000728	arl5c	100	86.592	Seriola_lalandi_dorsalis
ENSLBEG00000006177	arl5c	86	89.385	ENSSPAG00000007687	arl5c	100	89.385	Stegastes_partitus
ENSLBEG00000006177	arl5c	86	89.944	ENSTRUG00000022814	arl5c	100	89.944	Takifugu_rubripes
ENSLBEG00000006177	arl5c	87	88.333	ENSTNIG00000003015	arl5c	100	88.333	Tetraodon_nigroviridis
ENSLBEG00000006177	arl5c	86	88.827	ENSXCOG00000017380	arl5c	100	88.827	Xiphophorus_couchianus
ENSLBEG00000006177	arl5c	86	88.268	ENSXMAG00000008447	arl5c	100	88.268	Xiphophorus_maculatus