EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSLBEG00000006193 (Gene tree)
Gene ID
109999889
Gene Symbol
-
Alias
-
Full Name
heterogeneous nuclear ribonucleoprotein C-like
Gene Type
protein_coding
Species
Labrus_bergylta
Status
putative
Strand
Minus strand
Length
6874 bases
Position
chrFKLU01000611.1:87939-94812
Accession
109999889
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSLBEP00000008041RRM_1PF00076.221.3e-1311
ENSLBEP00000008058RRM_1PF00076.221.3e-1311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSLBET00000008449-1904XM_020655045ENSLBEP00000008041316 (aa)XP_020510701UPI0009B3ACF9
ENSLBET00000008466-1786XM_020655046ENSLBEP00000008058316 (aa)XP_020510702UPI0009B3ACF9
Gene Model
Click here to download ENSLBEG00000006193's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000006193's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSLBEG00000006193-8452.113ENSLBEG00000011011-7357.991
ENSLBEG00000006193-8773.171ENSLBEG00000024418-8673.004
ENSLBEG00000006193-8677.455ENSLBEG00000006979-8578.313
ENSLBEG00000006193-8350.178ENSLBEG00000012873-7556.637
ENSLBEG00000006193-6652.315ENSLBEG00000022656raly8153.881
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSLBEG00000006193-8449.638ENSG00000184672RALYL9275.641Homo_sapiens
ENSLBEG00000006193-7985.375ENSAPOG00000006963hnrnpc8481.298Acanthochromis_polyacanthus
ENSLBEG00000006193-8082.625ENSACIG00000000270-8384.018Amphilophus_citrinellus
ENSLBEG00000006193-9784.691ENSACIG00000016568-10086.688Amphilophus_citrinellus
ENSLBEG00000006193-7984.980ENSAOCG00000003896-8480.916Amphiprion_ocellaris
ENSLBEG00000006193-9688.636ENSAOCG00000021616-10086.646Amphiprion_ocellaris
ENSLBEG00000006193-7984.980ENSAPEG00000001489-8480.916Amphiprion_percula
ENSLBEG00000006193-8092.941ENSAPEG00000019962-8591.635Amphiprion_percula
ENSLBEG00000006193-8084.047ENSATEG00000011734-8580.784Anabas_testudineus
ENSLBEG00000006193-8493.609ENSATEG00000018006-10088.199Anabas_testudineus
ENSLBEG00000006193-6653.333ENSAPLG00000015574RALYL7654.222Anas_platyrhynchos
ENSLBEG00000006193-6655.111ENSACAG00000028464RALYL7554.222Anolis_carolinensis
ENSLBEG00000006193-8449.638ENSANAG00000023383RALYL7357.416Aotus_nancymaae
ENSLBEG00000006193-7979.842ENSACLG00000000995-8183.182Astatotilapia_calliptera
ENSLBEG00000006193-8489.888ENSACLG00000005707-8989.811Astatotilapia_calliptera
ENSLBEG00000006193-7979.447ENSACLG00000013636-8778.626Astatotilapia_calliptera
ENSLBEG00000006193-6679.048ENSAMXG00000042946hnrnpc9775.393Astyanax_mexicanus
ENSLBEG00000006193-8378.788ENSAMXG00000034915zgc:557339076.806Astyanax_mexicanus
ENSLBEG00000006193-8449.638ENSCJAG00000000402RALYL7357.416Callithrix_jacchus
ENSLBEG00000006193-8448.780ENSCPOG00000012314RALYL7455.856Cavia_porcellus
ENSLBEG00000006193-8449.275ENSCCAG00000025003RALYL7675.641Cebus_capucinus
ENSLBEG00000006193-8449.638ENSCATG00000042145RALYL7456.872Cercocebus_atys
ENSLBEG00000006193-8448.780ENSCLAG00000005228RALYL7555.357Chinchilla_lanigera
ENSLBEG00000006193-6653.778ENSCHOG00000013228RALYL7550.862Choloepus_hoffmanni
ENSLBEG00000006193-8449.638ENSCANG00000039144RALYL7456.872Colobus_angolensis_palliatus
ENSLBEG00000006193-8448.264ENSCGRG00001009241Ralyl7554.667Cricetulus_griseus_chok1gshd
ENSLBEG00000006193-7075.446ENSCSEG00000019769-7574.554Cynoglossus_semilaevis
ENSLBEG00000006193-8185.603ENSCSEG00000021349-8085.603Cynoglossus_semilaevis
ENSLBEG00000006193-10082.154ENSCVAG00000016981-10081.231Cyprinodon_variegatus
ENSLBEG00000006193-8666.304ENSCVAG00000002797-8565.625Cyprinodon_variegatus
ENSLBEG00000006193-7680.165ENSDARG00000053810hnrnpc9872.381Danio_rerio
ENSLBEG00000006193-8380.843ENSDARG00000103845zgc:557339378.077Danio_rerio
ENSLBEG00000006193-8448.958ENSDORG00000003721Ralyl7555.556Dipodomys_ordii
ENSLBEG00000006193-5156.069ENSETEG00000014028RALYL8259.006Echinops_telfairi
ENSLBEG00000006193-8341.241ENSEBUG00000012363hnrnpc6944.304Eptatretus_burgeri
ENSLBEG00000006193-8940.956ENSEBUG00000006049RALYL7446.479Eptatretus_burgeri
ENSLBEG00000006193-8449.306ENSEEUG00000007202RALYL7655.111Erinaceus_europaeus
ENSLBEG00000006193-7980.377ENSELUG00000007714-9378.545Esox_lucius
ENSLBEG00000006193-9678.317ENSELUG00000004132-9975.405Esox_lucius
ENSLBEG00000006193-8246.099ENSFALG00000008647RALYL9656.744Ficedula_albicollis
ENSLBEG00000006193-9780.793ENSFHEG00000007278-10077.744Fundulus_heteroclitus
ENSLBEG00000006193-8675.986ENSFHEG00000003605-8675.285Fundulus_heteroclitus
ENSLBEG00000006193-6657.746ENSGALG00000036938RALYL7454.222Gallus_gallus
ENSLBEG00000006193-9784.244ENSGAFG00000020992-10082.315Gambusia_affinis
ENSLBEG00000006193-8674.194ENSGAFG00000020486-8574.525Gambusia_affinis
ENSLBEG00000006193-10082.875ENSGACG00000017772-9791.633Gasterosteus_aculeatus
ENSLBEG00000006193-6974.194ENSGACG00000018932-8873.973Gasterosteus_aculeatus
ENSLBEG00000006193-8449.638ENSGGOG00000000841RALYL7456.872Gorilla_gorilla
ENSLBEG00000006193-7980.237ENSHBUG00000018342-8579.389Haplochromis_burtoni
ENSLBEG00000006193-10084.639ENSHBUG00000010527-10085.938Haplochromis_burtoni
ENSLBEG00000006193-8448.432ENSHGLG00000004866RALYL7554.911Heterocephalus_glaber_female
ENSLBEG00000006193-8448.432ENSHGLG00100017480RALYL7554.911Heterocephalus_glaber_male
ENSLBEG00000006193-8284.559ENSHCOG00000012333hnrnpc9084.727Hippocampus_comes
ENSLBEG00000006193-8081.423ENSIPUG00000011271hnrnpc9781.778Ictalurus_punctatus
ENSLBEG00000006193-8379.924ENSIPUG00000008666zgc:557339481.395Ictalurus_punctatus
ENSLBEG00000006193-8448.611ENSSTOG00000012583RALYL7555.605Ictidomys_tridecemlineatus
ENSLBEG00000006193-9687.255ENSKMAG00000018265-10082.812Kryptolebias_marmoratus
ENSLBEG00000006193-8778.495ENSKMAG00000011170-10066.667Kryptolebias_marmoratus
ENSLBEG00000006193-8370.522ENSLOCG00000002560hnrnpc9070.301Lepisosteus_oculatus
ENSLBEG00000006193-8449.638ENSMNEG00000033288RALYL7456.872Macaca_nemestrina
ENSLBEG00000006193-8449.638ENSMLEG00000038284RALYL7456.872Mandrillus_leucophaeus
ENSLBEG00000006193-7985.771ENSMAMG00000012236-8482.677Mastacembelus_armatus
ENSLBEG00000006193-10087.500ENSMAMG00000008033-10086.562Mastacembelus_armatus
ENSLBEG00000006193-10084.639ENSMZEG00005024249-10085.938Maylandia_zebra
ENSLBEG00000006193-7979.842ENSMZEG00005020460-8777.132Maylandia_zebra
ENSLBEG00000006193-8448.264ENSMAUG00000015149Ralyl7554.667Mesocricetus_auratus
ENSLBEG00000006193-8847.176ENSMICG00000005558RALYL7975.641Microcebus_murinus
ENSLBEG00000006193-8448.611ENSMOCG00000017371Ralyl7455.157Microtus_ochrogaster
ENSLBEG00000006193-9088.014ENSMMOG00000019520-10084.589Mola_mola
ENSLBEG00000006193-8380.682ENSMMOG00000021465-9179.771Mola_mola
ENSLBEG00000006193-8487.547ENSMALG00000014623-8388.593Monopterus_albus
ENSLBEG00000006193-8072.549ENSMALG00000007520-8473.123Monopterus_albus
ENSLBEG00000006193-8447.917ENSMUSG00000039717Ralyl9274.359Mus_musculus
ENSLBEG00000006193-8449.306ENSMPUG00000010724RALYL7554.222Mustela_putorius_furo
ENSLBEG00000006193-8447.917ENSNGAG00000013375Ralyl7554.667Nannospalax_galili
ENSLBEG00000006193-8180.233ENSNBRG00000004912-9380.176Neolamprologus_brichardi
ENSLBEG00000006193-10087.500ENSNBRG00000015676-10086.250Neolamprologus_brichardi
ENSLBEG00000006193-8449.638ENSNLEG00000002702RALYL7056.872Nomascus_leucogenys
ENSLBEG00000006193-5749.741ENSOPRG00000013650-9849.223Ochotona_princeps
ENSLBEG00000006193-8449.135ENSODEG00000001012RALYL7554.911Octodon_degus
ENSLBEG00000006193-7981.028ENSONIG00000007859-9379.630Oreochromis_niloticus
ENSLBEG00000006193-10083.699ENSONIG00000018350-10085.000Oreochromis_niloticus
ENSLBEG00000006193-7972.941ENSORLG00000009999-8570.455Oryzias_latipes
ENSLBEG00000006193-9684.810ENSORLG00000003144-10083.030Oryzias_latipes
ENSLBEG00000006193-7972.549ENSORLG00020018228hnrnpc8570.076Oryzias_latipes_hni
ENSLBEG00000006193-9684.277ENSORLG00015009460-10081.928Oryzias_latipes_hsok
ENSLBEG00000006193-7972.941ENSORLG00015019755-8570.455Oryzias_latipes_hsok
ENSLBEG00000006193-9687.869ENSOMEG00000022665-10086.207Oryzias_melastigma
ENSLBEG00000006193-7974.118ENSOMEG00000020488-8471.591Oryzias_melastigma
ENSLBEG00000006193-8449.638ENSPPAG00000038705RALYL7456.872Pan_paniscus
ENSLBEG00000006193-8451.439ENSPPRG00000018612RALYL7457.209Panthera_pardus
ENSLBEG00000006193-8451.439ENSPTIG00000020331RALYL7457.209Panthera_tigris_altaica
ENSLBEG00000006193-8449.638ENSPTRG00000020381RALYL7456.872Pan_troglodytes
ENSLBEG00000006193-8449.638ENSPANG00000029305RALYL7456.872Papio_anubis
ENSLBEG00000006193-8475.368ENSPKIG00000022837-9878.056Paramormyrops_kingsleyae
ENSLBEG00000006193-8479.412ENSPKIG00000008592-10076.923Paramormyrops_kingsleyae
ENSLBEG00000006193-6655.111ENSPSIG00000011135RALYL7454.222Pelodiscus_sinensis
ENSLBEG00000006193-6991.244ENSPMGG00000013144-8288.479Periophthalmus_magnuspinnatus
ENSLBEG00000006193-9561.873ENSPMGG00000017774-9664.502Periophthalmus_magnuspinnatus
ENSLBEG00000006193-8448.264ENSPEMG00000016447Ralyl7554.667Peromyscus_maniculatus_bairdii
ENSLBEG00000006193-6652.655ENSPMAG00000002407RALYL9751.339Petromyzon_marinus
ENSLBEG00000006193-8675.180ENSPFOG00000001583-8576.806Poecilia_formosa
ENSLBEG00000006193-10084.735ENSPFOG00000002643-10081.931Poecilia_formosa
ENSLBEG00000006193-8674.101ENSPLAG00000015305-8575.665Poecilia_latipinna
ENSLBEG00000006193-10083.851ENSPLAG00000000061-10081.988Poecilia_latipinna
ENSLBEG00000006193-10084.112ENSPMEG00000016524-10081.308Poecilia_mexicana
ENSLBEG00000006193-8676.344ENSPMEG00000004802-8576.806Poecilia_mexicana
ENSLBEG00000006193-7975.984ENSPREG00000007928-8575.665Poecilia_reticulata
ENSLBEG00000006193-8489.015ENSPREG00000001852-8888.550Poecilia_reticulata
ENSLBEG00000006193-8442.491ENSPPYG00000018710-6668.807Pongo_abelii
ENSLBEG00000006193-8346.831ENSPVAG00000010821RALYL7852.966Pteropus_vampyrus
ENSLBEG00000006193-9975.321ENSPNYG00000003747-8989.811Pundamilia_nyererei
ENSLBEG00000006193-8180.233ENSPNYG00000020293-8781.250Pundamilia_nyererei
ENSLBEG00000006193-8374.349ENSPNAG00000019200zgc:557338574.254Pygocentrus_nattereri
ENSLBEG00000006193-7881.707ENSPNAG00000015686hnrnpc8879.468Pygocentrus_nattereri
ENSLBEG00000006193-8449.638ENSRROG00000023925RALYL8173.750Rhinopithecus_roxellana
ENSLBEG00000006193-8474.908ENSSFOG00015012015-9275.238Scleropages_formosus
ENSLBEG00000006193-8078.244ENSSFOG00015012924-8096.203Scleropages_formosus
ENSLBEG00000006193-10085.538ENSSMAG00000011147-10086.154Scophthalmus_maximus
ENSLBEG00000006193-7979.842ENSSMAG00000013592-9971.384Scophthalmus_maximus
ENSLBEG00000006193-10085.804ENSSDUG00000006730-10085.489Seriola_dumerili
ENSLBEG00000006193-8680.505ENSSDUG00000001723-8683.032Seriola_dumerili
ENSLBEG00000006193-8488.679ENSSLDG00000007474-9189.354Seriola_lalandi_dorsalis
ENSLBEG00000006193-8481.784ENSSLDG00000007454-8582.061Seriola_lalandi_dorsalis
ENSLBEG00000006193-6070.874ENSSARG00000002374RALYL7546.977Sorex_araneus
ENSLBEG00000006193-10087.342ENSSPAG00000013996-10087.342Stegastes_partitus
ENSLBEG00000006193-8583.942ENSSPAG00000023204-8482.061Stegastes_partitus
ENSLBEG00000006193-8246.809ENSTGUG00000011689RALYL7952.991Taeniopygia_guttata
ENSLBEG00000006193-8081.176ENSTRUG00000020158-8377.866Takifugu_rubripes
ENSLBEG00000006193-8078.378ENSTNIG00000007427-8375.875Tetraodon_nigroviridis
ENSLBEG00000006193-8079.134ENSTNIG00000000334-9377.606Tetraodon_nigroviridis
ENSLBEG00000006193-6646.606ENSTBEG00000005551RALYL8649.321Tupaia_belangeri
ENSLBEG00000006193-8447.703ENSTTRG00000015762RALYL7354.128Tursiops_truncatus
ENSLBEG00000006193-8446.931ENSVPAG00000008501RALYL7353.052Vicugna_pacos
ENSLBEG00000006193-8669.784ENSXCOG00000006552-8369.767Xiphophorus_couchianus
ENSLBEG00000006193-8489.015ENSXMAG00000022849-8688.550Xiphophorus_maculatus
ENSLBEG00000006193-8675.986ENSXMAG00000009333-8574.905Xiphophorus_maculatus

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