EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000006201 (Gene tree)
Gene ID: -
Gene Symbol: pcbp3
Alias: -
Full Name: poly(rC)-binding protein 3-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 13144 bases
Position: chrFKLU01000066.1:1019969-1033112
Accession: 109984165
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000008053	KH_1	PF00013.29	1.2e-48	1	3
ENSLBEP00000008053	KH_1	PF00013.29	1.2e-48	2	3
ENSLBEP00000008053	KH_1	PF00013.29	1.2e-48	3	3
ENSLBEP00000008053	KH_2	PF07650.17	1.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000008462	-	963	XM_020634199	ENSLBEP00000008053	320 (aa)	XP_020489855	-

Gene Model

Click here to download ENSLBEG00000006201's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000006201's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000006201	pcbp3	74	55.556	ENSLBEG00000019787	hnrpkl	52	55.556
ENSLBEG00000006201	pcbp3	67	40.506	ENSLBEG00000005191	khsrp	66	40.506
ENSLBEG00000006201	pcbp3	95	74.684	ENSLBEG00000010080	pcbp2	97	74.684
ENSLBEG00000006201	pcbp3	89	40.278	ENSLBEG00000028542	nova1	52	40.278
ENSLBEG00000006201	pcbp3	65	37.681	ENSLBEG00000012700	fubp1	67	36.486
ENSLBEG00000006201	pcbp3	98	80.000	ENSLBEG00000006542	-	99	80.000
ENSLBEG00000006201	pcbp3	89	39.683	ENSLBEG00000007845	-	62	39.683
ENSLBEG00000006201	pcbp3	74	55.556	ENSLBEG00000001550	hnrnpk	53	55.556
ENSLBEG00000006201	pcbp3	89	37.879	ENSLBEG00000017826	FUBP3	61	37.879
ENSLBEG00000006201	pcbp3	96	65.758	ENSLBEG00000023074	zgc:110045	97	65.758
ENSLBEG00000006201	pcbp3	89	32.540	ENSLBEG00000003710	IGF2BP2	80	32.540
ENSLBEG00000006201	pcbp3	95	60.661	ENSLBEG00000011345	-	72	60.661
ENSLBEG00000006201	pcbp3	95	75.472	ENSLBEG00000015211	PCBP2	97	75.472

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000006201	pcbp3	98	93.146	ENSAPOG00000016582	-	99	93.146	Acanthochromis_polyacanthus
ENSLBEG00000006201	pcbp3	98	96.795	ENSAPOG00000020003	pcbp3	88	96.795	Acanthochromis_polyacanthus
ENSLBEG00000006201	pcbp3	96	86.970	ENSAMEG00000001697	-	98	82.899	Ailuropoda_melanoleuca
ENSLBEG00000006201	pcbp3	98	92.547	ENSACIG00000002739	-	99	92.547	Amphilophus_citrinellus
ENSLBEG00000006201	pcbp3	96	90.634	ENSACIG00000010933	pcbp3	96	90.634	Amphilophus_citrinellus
ENSLBEG00000006201	pcbp3	95	97.097	ENSAOCG00000008592	-	98	97.097	Amphiprion_ocellaris
ENSLBEG00000006201	pcbp3	87	91.724	ENSAOCG00000007806	-	99	91.724	Amphiprion_ocellaris
ENSLBEG00000006201	pcbp3	96	89.053	ENSAPEG00000008011	pcbp3	96	89.053	Amphiprion_percula
ENSLBEG00000006201	pcbp3	98	93.987	ENSAPEG00000005209	-	99	93.987	Amphiprion_percula
ENSLBEG00000006201	pcbp3	95	91.463	ENSATEG00000015787	-	100	91.463	Anabas_testudineus
ENSLBEG00000006201	pcbp3	98	94.888	ENSATEG00000009833	-	99	94.888	Anabas_testudineus
ENSLBEG00000006201	pcbp3	96	88.308	ENSAPLG00000002975	-	98	88.308	Anas_platyrhynchos
ENSLBEG00000006201	pcbp3	93	74.432	ENSAPLG00000008951	-	79	74.432	Anas_platyrhynchos
ENSLBEG00000006201	pcbp3	96	81.356	ENSACAG00000004607	-	98	81.356	Anolis_carolinensis
ENSLBEG00000006201	pcbp3	96	80.240	ENSACAG00000009819	-	97	80.240	Anolis_carolinensis
ENSLBEG00000006201	pcbp3	93	76.471	ENSANAG00000030702	-	99	93.617	Aotus_nancymaae
ENSLBEG00000006201	pcbp3	98	94.249	ENSACLG00000003801	-	99	94.249	Astatotilapia_calliptera
ENSLBEG00000006201	pcbp3	96	88.757	ENSACLG00000011835	pcbp3	96	88.757	Astatotilapia_calliptera
ENSLBEG00000006201	pcbp3	95	93.115	ENSAMXG00000013588	-	100	93.115	Astyanax_mexicanus
ENSLBEG00000006201	pcbp3	93	68.615	ENSAMXG00000001760	zgc:110045	72	68.615	Astyanax_mexicanus
ENSLBEG00000006201	pcbp3	96	87.500	ENSAMXG00000003440	pcbp3	96	87.500	Astyanax_mexicanus
ENSLBEG00000006201	pcbp3	88	93.013	ENSCAFG00020019472	-	81	93.013	Canis_lupus_dingo
ENSLBEG00000006201	pcbp3	96	92.283	ENSCSAG00000007440	-	89	92.283	Chlorocebus_sabaeus
ENSLBEG00000006201	pcbp3	93	80.122	ENSCPBG00000000733	-	73	79.154	Chrysemys_picta_bellii
ENSLBEG00000006201	pcbp3	95	92.532	ENSCPBG00000012151	-	98	87.009	Chrysemys_picta_bellii
ENSLBEG00000006201	pcbp3	98	77.876	ENSCSEG00000016984	-	99	77.876	Cynoglossus_semilaevis
ENSLBEG00000006201	pcbp3	95	96.393	ENSCSEG00000000822	pcbp3	99	96.393	Cynoglossus_semilaevis
ENSLBEG00000006201	pcbp3	98	93.354	ENSCVAG00000005262	-	99	93.354	Cyprinodon_variegatus
ENSLBEG00000006201	pcbp3	96	88.757	ENSCVAG00000014482	pcbp3	96	88.757	Cyprinodon_variegatus
ENSLBEG00000006201	pcbp3	98	87.683	ENSDARG00000054378	pcbp3	99	87.683	Danio_rerio
ENSLBEG00000006201	pcbp3	96	80.064	ENSETEG00000015988	-	97	80.064	Echinops_telfairi
ENSLBEG00000006201	pcbp3	90	70.796	ENSEBUG00000005495	pcbp3	68	70.796	Eptatretus_burgeri
ENSLBEG00000006201	pcbp3	86	73.551	ENSEBUG00000016192	pcbp3	99	74.627	Eptatretus_burgeri
ENSLBEG00000006201	pcbp3	96	76.341	ENSEBUG00000007485	-	92	78.082	Eptatretus_burgeri
ENSLBEG00000006201	pcbp3	97	89.172	ENSELUG00000003521	pcbp3	98	89.172	Esox_lucius
ENSLBEG00000006201	pcbp3	96	93.610	ENSELUG00000001560	-	99	82.768	Esox_lucius
ENSLBEG00000006201	pcbp3	96	91.961	ENSFALG00000003949	-	97	91.961	Ficedula_albicollis
ENSLBEG00000006201	pcbp3	93	74.716	ENSFALG00000004411	-	74	74.716	Ficedula_albicollis
ENSLBEG00000006201	pcbp3	97	96.774	ENSFHEG00000016615	pcbp3	97	96.774	Fundulus_heteroclitus
ENSLBEG00000006201	pcbp3	98	93.671	ENSFHEG00000006539	-	99	93.671	Fundulus_heteroclitus
ENSLBEG00000006201	pcbp3	95	69.394	ENSGMOG00000008611	-	100	69.394	Gadus_morhua
ENSLBEG00000006201	pcbp3	95	79.518	ENSGMOG00000011992	pcbp3	96	79.580	Gadus_morhua
ENSLBEG00000006201	pcbp3	97	78.529	ENSGALG00000013155	-	98	81.308	Gallus_gallus
ENSLBEG00000006201	pcbp3	96	81.250	ENSGALG00000004394	-	98	89.130	Gallus_gallus
ENSLBEG00000006201	pcbp3	96	93.291	ENSGAFG00000010274	-	96	93.291	Gambusia_affinis
ENSLBEG00000006201	pcbp3	99	86.667	ENSGAFG00000011430	pcbp3	100	86.667	Gambusia_affinis
ENSLBEG00000006201	pcbp3	98	86.726	ENSGACG00000002266	-	99	86.726	Gasterosteus_aculeatus
ENSLBEG00000006201	pcbp3	95	79.887	ENSGACG00000014955	-	97	79.887	Gasterosteus_aculeatus
ENSLBEG00000006201	pcbp3	75	89.674	ENSGAGG00000006956	-	76	89.674	Gopherus_agassizii
ENSLBEG00000006201	pcbp3	83	88.390	ENSGAGG00000000271	-	100	88.390	Gopherus_agassizii
ENSLBEG00000006201	pcbp3	98	94.249	ENSHBUG00000021782	-	99	94.249	Haplochromis_burtoni
ENSLBEG00000006201	pcbp3	95	96.452	ENSHBUG00000010697	pcbp3	98	96.452	Haplochromis_burtoni
ENSLBEG00000006201	pcbp3	96	89.021	ENSHCOG00000017868	pcbp3	96	89.021	Hippocampus_comes
ENSLBEG00000006201	pcbp3	99	87.539	ENSHCOG00000006067	-	100	87.539	Hippocampus_comes
ENSLBEG00000006201	pcbp3	98	94.249	ENSIPUG00000006238	pcbp3	99	94.249	Ictalurus_punctatus
ENSLBEG00000006201	pcbp3	96	88.757	ENSKMAG00000003046	pcbp3	96	88.757	Kryptolebias_marmoratus
ENSLBEG00000006201	pcbp3	96	92.332	ENSKMAG00000018530	-	96	92.332	Kryptolebias_marmoratus
ENSLBEG00000006201	pcbp3	93	80.286	ENSLACG00000010386	pcbp3	74	80.286	Latimeria_chalumnae
ENSLBEG00000006201	pcbp3	93	74.785	ENSLACG00000010804	zgc:110045	74	74.785	Latimeria_chalumnae
ENSLBEG00000006201	pcbp3	96	87.009	ENSLOCG00000009369	pcbp3	98	87.009	Lepisosteus_oculatus
ENSLBEG00000006201	pcbp3	93	80.247	ENSLOCG00000005058	zgc:110045	79	80.247	Lepisosteus_oculatus
ENSLBEG00000006201	pcbp3	95	98.033	ENSMAMG00000022336	pcbp3	93	98.033	Mastacembelus_armatus
ENSLBEG00000006201	pcbp3	98	93.610	ENSMAMG00000011620	-	99	93.610	Mastacembelus_armatus
ENSLBEG00000006201	pcbp3	96	86.834	ENSMZEG00005014882	-	96	87.461	Maylandia_zebra
ENSLBEG00000006201	pcbp3	96	89.286	ENSMZEG00005008993	pcbp3	98	89.489	Maylandia_zebra
ENSLBEG00000006201	pcbp3	93	74.716	ENSMGAG00000006794	-	74	74.716	Meleagris_gallopavo
ENSLBEG00000006201	pcbp3	93	77.681	ENSMGAG00000001883	-	95	77.971	Meleagris_gallopavo
ENSLBEG00000006201	pcbp3	97	93.060	ENSMMOG00000000730	pcbp3	89	93.060	Mola_mola
ENSLBEG00000006201	pcbp3	98	94.249	ENSMMOG00000005216	-	99	94.249	Mola_mola
ENSLBEG00000006201	pcbp3	71	76.056	ENSMODG00000027884	-	93	76.056	Monodelphis_domestica
ENSLBEG00000006201	pcbp3	95	91.437	ENSMALG00000000691	pcbp3	95	91.437	Monopterus_albus
ENSLBEG00000006201	pcbp3	96	84.663	ENSMPUG00000001779	-	90	84.663	Mustela_putorius_furo
ENSLBEG00000006201	pcbp3	96	87.461	ENSNBRG00000016714	-	98	85.759	Neolamprologus_brichardi
ENSLBEG00000006201	pcbp3	96	90.030	ENSNBRG00000016409	-	96	90.030	Neolamprologus_brichardi
ENSLBEG00000006201	pcbp3	93	82.006	ENSOPRG00000003431	-	98	82.006	Ochotona_princeps
ENSLBEG00000006201	pcbp3	98	93.082	ENSONIG00000004611	-	99	93.082	Oreochromis_niloticus
ENSLBEG00000006201	pcbp3	95	84.703	ENSONIG00000012122	-	98	84.703	Oreochromis_niloticus
ENSLBEG00000006201	pcbp3	96	91.640	ENSOCUG00000002696	-	89	91.640	Oryctolagus_cuniculus
ENSLBEG00000006201	pcbp3	95	97.097	ENSORLG00000000059	pcbp3	100	97.097	Oryzias_latipes
ENSLBEG00000006201	pcbp3	98	93.082	ENSORLG00000022739	-	99	93.082	Oryzias_latipes
ENSLBEG00000006201	pcbp3	95	97.097	ENSORLG00020012671	pcbp3	97	97.097	Oryzias_latipes_hni
ENSLBEG00000006201	pcbp3	98	93.930	ENSORLG00020006124	-	99	93.930	Oryzias_latipes_hni
ENSLBEG00000006201	pcbp3	95	97.097	ENSORLG00015000429	pcbp3	97	97.097	Oryzias_latipes_hsok
ENSLBEG00000006201	pcbp3	96	93.291	ENSORLG00015008051	-	96	93.291	Oryzias_latipes_hsok
ENSLBEG00000006201	pcbp3	98	93.930	ENSOMEG00000020162	-	99	93.930	Oryzias_melastigma
ENSLBEG00000006201	pcbp3	86	99.636	ENSOMEG00000020811	pcbp3	95	99.636	Oryzias_melastigma
ENSLBEG00000006201	pcbp3	96	79.552	ENSOGAG00000008044	-	98	79.552	Otolemur_garnettii
ENSLBEG00000006201	pcbp3	98	94.569	ENSPKIG00000019329	pcbp3	99	94.569	Paramormyrops_kingsleyae
ENSLBEG00000006201	pcbp3	75	85.946	ENSPKIG00000020913	-	82	85.946	Paramormyrops_kingsleyae
ENSLBEG00000006201	pcbp3	70	79.675	ENSPSIG00000008350	-	68	79.675	Pelodiscus_sinensis
ENSLBEG00000006201	pcbp3	96	78.963	ENSPSIG00000014970	-	98	79.573	Pelodiscus_sinensis
ENSLBEG00000006201	pcbp3	95	90.332	ENSPMGG00000022383	pcbp3	95	90.332	Periophthalmus_magnuspinnatus
ENSLBEG00000006201	pcbp3	75	85.106	ENSPMAG00000004637	-	97	85.106	Petromyzon_marinus
ENSLBEG00000006201	pcbp3	93	71.845	ENSPMAG00000004551	pcbp3	88	71.845	Petromyzon_marinus
ENSLBEG00000006201	pcbp3	96	85.928	ENSPCIG00000028092	-	98	85.928	Phascolarctos_cinereus
ENSLBEG00000006201	pcbp3	95	85.260	ENSPLAG00000011449	pcbp3	88	85.260	Poecilia_latipinna
ENSLBEG00000006201	pcbp3	97	90.683	ENSPLAG00000004074	-	91	90.683	Poecilia_latipinna
ENSLBEG00000006201	pcbp3	95	89.552	ENSPMEG00000021239	pcbp3	95	89.552	Poecilia_mexicana
ENSLBEG00000006201	pcbp3	99	86.239	ENSPMEG00000006653	-	100	86.239	Poecilia_mexicana
ENSLBEG00000006201	pcbp3	95	97.049	ENSPREG00000015736	pcbp3	99	97.049	Poecilia_reticulata
ENSLBEG00000006201	pcbp3	98	94.249	ENSPREG00000020585	-	99	94.249	Poecilia_reticulata
ENSLBEG00000006201	pcbp3	98	94.249	ENSPNYG00000013205	-	99	94.249	Pundamilia_nyererei
ENSLBEG00000006201	pcbp3	95	96.774	ENSPNYG00000012326	pcbp3	95	96.774	Pundamilia_nyererei
ENSLBEG00000006201	pcbp3	95	94.059	ENSPNAG00000008541	-	98	94.059	Pygocentrus_nattereri
ENSLBEG00000006201	pcbp3	98	93.711	ENSPNAG00000015104	pcbp3	99	93.711	Pygocentrus_nattereri
ENSLBEG00000006201	pcbp3	96	92.283	ENSRNOG00000001245	Pcbp3	97	92.283	Rattus_norvegicus
ENSLBEG00000006201	pcbp3	96	82.043	ENSRBIG00000028177	-	89	82.043	Rhinopithecus_bieti
ENSLBEG00000006201	pcbp3	96	86.405	ENSSHAG00000007890	-	98	86.405	Sarcophilus_harrisii
ENSLBEG00000006201	pcbp3	96	85.714	ENSSFOG00015014706	pcbp3	96	85.714	Scleropages_formosus
ENSLBEG00000006201	pcbp3	96	93.610	ENSSFOG00015010205	pcbp3	96	93.610	Scleropages_formosus
ENSLBEG00000006201	pcbp3	93	84.053	ENSSFOG00015007118	-	93	84.053	Scleropages_formosus
ENSLBEG00000006201	pcbp3	98	93.651	ENSSMAG00000003135	-	99	93.651	Scophthalmus_maximus
ENSLBEG00000006201	pcbp3	95	98.361	ENSSMAG00000011929	pcbp3	97	98.361	Scophthalmus_maximus
ENSLBEG00000006201	pcbp3	95	90.606	ENSSDUG00000011608	pcbp3	99	90.606	Seriola_dumerili
ENSLBEG00000006201	pcbp3	96	90.735	ENSSDUG00000008502	-	96	90.735	Seriola_dumerili
ENSLBEG00000006201	pcbp3	96	93.930	ENSSLDG00000020161	-	96	93.930	Seriola_lalandi_dorsalis
ENSLBEG00000006201	pcbp3	95	90.606	ENSSLDG00000008518	pcbp3	99	90.606	Seriola_lalandi_dorsalis
ENSLBEG00000006201	pcbp3	93	76.453	ENSSPUG00000013214	-	90	85.279	Sphenodon_punctatus
ENSLBEG00000006201	pcbp3	96	78.378	ENSSPAG00000023341	-	96	78.378	Stegastes_partitus
ENSLBEG00000006201	pcbp3	87	91.724	ENSSPAG00000004190	-	99	91.724	Stegastes_partitus
ENSLBEG00000006201	pcbp3	96	86.174	ENSTGUG00000008158	-	98	86.174	Taeniopygia_guttata
ENSLBEG00000006201	pcbp3	96	84.592	ENSTGUG00000003316	-	98	84.592	Taeniopygia_guttata
ENSLBEG00000006201	pcbp3	96	92.000	ENSTRUG00000013604	pcbp3	96	92.000	Takifugu_rubripes
ENSLBEG00000006201	pcbp3	97	89.320	ENSTRUG00000006280	-	98	89.320	Takifugu_rubripes
ENSLBEG00000006201	pcbp3	96	79.944	ENSTTRG00000015075	-	98	79.944	Tursiops_truncatus
ENSLBEG00000006201	pcbp3	96	85.801	ENSXETG00000011483	pcbp1	98	85.801	Xenopus_tropicalis
ENSLBEG00000006201	pcbp3	89	73.373	ENSXETG00000010491	pcbp2	74	73.373	Xenopus_tropicalis
ENSLBEG00000006201	pcbp3	95	89.552	ENSXCOG00000020481	pcbp3	95	89.552	Xiphophorus_couchianus
ENSLBEG00000006201	pcbp3	96	93.610	ENSXMAG00000028711	-	96	93.610	Xiphophorus_maculatus
ENSLBEG00000006201	pcbp3	96	89.053	ENSXMAG00000008175	pcbp3	96	89.053	Xiphophorus_maculatus