EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000006362 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 1744 bases
Position: chrFKLU01000673.1:26180-27923
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000008285	RRM_1	PF00076.22	2.2e-30	1	2
ENSLBEP00000008285	RRM_1	PF00076.22	2.2e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000008702	-	633	-	ENSLBEP00000008285	210 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000006362's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000006362's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000006362	-	81	38.554	ENSLBEG00000004479	-	57	36.875
ENSLBEG00000006362	-	78	41.667	ENSLBEG00000027508	hnrnpd	56	41.667
ENSLBEG00000006362	-	81	37.500	ENSLBEG00000006595	hnrnpaba	64	36.875
ENSLBEG00000006362	-	69	39.474	ENSLBEG00000027731	-	62	43.103
ENSLBEG00000006362	-	66	41.558	ENSLBEG00000000292	cirbpa	50	41.558
ENSLBEG00000006362	-	78	40.506	ENSLBEG00000008789	MSI1	51	40.506
ENSLBEG00000006362	-	79	55.556	ENSLBEG00000010010	hnrnpa1a	55	56.250
ENSLBEG00000006362	-	98	37.438	ENSLBEG00000007061	msi2a	78	40.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000006362	-	79	90.964	ENSAOCG00000015914	-	63	90.964	Amphiprion_ocellaris
ENSLBEG00000006362	-	79	70.807	ENSAOCG00000015951	-	96	70.807	Amphiprion_ocellaris
ENSLBEG00000006362	-	79	70.807	ENSAPEG00000002274	-	96	70.807	Amphiprion_percula
ENSLBEG00000006362	-	79	90.964	ENSAPEG00000002224	-	74	90.964	Amphiprion_percula
ENSLBEG00000006362	-	79	87.349	ENSACLG00000008978	-	81	87.349	Astatotilapia_calliptera
ENSLBEG00000006362	-	79	87.349	ENSCVAG00000008324	-	76	87.349	Cyprinodon_variegatus
ENSLBEG00000006362	-	73	35.099	ENSEBUG00000010003	-	79	35.099	Eptatretus_burgeri
ENSLBEG00000006362	-	79	74.545	ENSELUG00000014407	-	98	74.545	Esox_lucius
ENSLBEG00000006362	-	79	87.349	ENSHBUG00000023867	-	81	87.349	Haplochromis_burtoni
ENSLBEG00000006362	-	79	80.723	ENSHCOG00000007180	-	75	80.723	Hippocampus_comes
ENSLBEG00000006362	-	53	71.429	ENSLOCG00000012121	-	61	71.429	Lepisosteus_oculatus
ENSLBEG00000006362	-	79	88.554	ENSMAMG00000017728	-	67	88.554	Mastacembelus_armatus
ENSLBEG00000006362	-	79	87.349	ENSMZEG00005001063	-	80	87.349	Maylandia_zebra
ENSLBEG00000006362	-	79	69.325	ENSMMOG00000004242	-	98	69.753	Mola_mola
ENSLBEG00000006362	-	77	42.683	ENSMEUG00000003051	-	52	42.424	Notamacropus_eugenii
ENSLBEG00000006362	-	78	57.407	ENSORLG00000023542	-	62	57.407	Oryzias_latipes
ENSLBEG00000006362	-	79	56.364	ENSORLG00000030284	-	63	51.695	Oryzias_latipes
ENSLBEG00000006362	-	78	57.764	ENSORLG00000023176	-	60	56.970	Oryzias_latipes
ENSLBEG00000006362	-	78	57.233	ENSORLG00020006029	-	60	57.233	Oryzias_latipes_hni
ENSLBEG00000006362	-	79	86.747	ENSORLG00020007171	-	96	86.747	Oryzias_latipes_hni
ENSLBEG00000006362	-	81	54.971	ENSORLG00020007084	-	79	54.971	Oryzias_latipes_hni
ENSLBEG00000006362	-	79	57.143	ENSOMEG00000002000	-	73	57.143	Oryzias_melastigma
ENSLBEG00000006362	-	79	54.762	ENSOMEG00000002509	-	88	53.571	Oryzias_melastigma
ENSLBEG00000006362	-	79	53.571	ENSOMEG00000021030	-	72	53.571	Oryzias_melastigma
ENSLBEG00000006362	-	79	54.167	ENSOMEG00000023475	-	80	54.167	Oryzias_melastigma
ENSLBEG00000006362	-	79	54.762	ENSOMEG00000006903	-	73	54.762	Oryzias_melastigma
ENSLBEG00000006362	-	79	54.167	ENSOMEG00000012368	-	67	54.167	Oryzias_melastigma
ENSLBEG00000006362	-	76	42.593	ENSOMEG00000006327	-	64	42.593	Oryzias_melastigma
ENSLBEG00000006362	-	85	52.486	ENSOMEG00000009566	-	91	52.486	Oryzias_melastigma
ENSLBEG00000006362	-	76	57.143	ENSOMEG00000002084	-	70	57.143	Oryzias_melastigma
ENSLBEG00000006362	-	79	87.349	ENSPREG00000010603	-	59	87.349	Poecilia_reticulata
ENSLBEG00000006362	-	79	87.349	ENSPNYG00000020763	-	81	87.349	Pundamilia_nyererei
ENSLBEG00000006362	-	77	72.050	ENSPNAG00000018051	-	80	72.050	Pygocentrus_nattereri
ENSLBEG00000006362	-	79	59.394	ENSSHAG00000015609	-	82	59.394	Sarcophilus_harrisii
ENSLBEG00000006362	-	87	87.978	ENSSDUG00000002394	-	96	87.978	Seriola_dumerili
ENSLBEG00000006362	-	79	69.872	ENSSLDG00000024685	-	88	69.872	Seriola_lalandi_dorsalis