EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000006420 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: probable proline--tRNA ligase%2C mitochondrial
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 1690 bases
Position: chrFKLU01004709.1:387-2076
Accession: 109976865
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000008337	HGTP_anticodon	PF03129.20	1.2e-09	1	1
ENSLBEP00000008337	tRNA-synt_2b	PF00587.25	3.3e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000008759	-	1173	XM_020626837	ENSLBEP00000008337	390 (aa)	XP_020482493	-

Gene Model

Click here to download ENSLBEG00000006420's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000006420's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000006420	-	96	93.085	ENSLBEG00000005842	pars2	81	93.085

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000006420	-	96	66.489	ENSG00000162396	PARS2	79	66.489	Homo_sapiens
ENSLBEG00000006420	-	96	90.426	ENSAPOG00000016537	pars2	78	90.426	Acanthochromis_polyacanthus
ENSLBEG00000006420	-	96	67.467	ENSAMEG00000019649	PARS2	79	67.467	Ailuropoda_melanoleuca
ENSLBEG00000006420	-	96	87.500	ENSACIG00000013596	pars2	78	87.500	Amphilophus_citrinellus
ENSLBEG00000006420	-	96	90.957	ENSAOCG00000023902	pars2	78	90.957	Amphiprion_ocellaris
ENSLBEG00000006420	-	96	90.691	ENSAPEG00000010009	pars2	83	90.691	Amphiprion_percula
ENSLBEG00000006420	-	96	87.234	ENSATEG00000019166	pars2	78	87.234	Anabas_testudineus
ENSLBEG00000006420	-	96	86.968	ENSATEG00000019329	-	78	86.968	Anabas_testudineus
ENSLBEG00000006420	-	96	66.755	ENSACAG00000000115	PARS2	79	66.755	Anolis_carolinensis
ENSLBEG00000006420	-	84	70.245	ENSANAG00000034319	PARS2	73	70.245	Aotus_nancymaae
ENSLBEG00000006420	-	96	89.096	ENSACLG00000009522	pars2	78	89.096	Astatotilapia_calliptera
ENSLBEG00000006420	-	96	76.862	ENSAMXG00000032578	pars2	78	76.862	Astyanax_mexicanus
ENSLBEG00000006420	-	96	68.883	ENSAMXG00000033563	-	81	68.883	Astyanax_mexicanus
ENSLBEG00000006420	-	96	67.819	ENSBTAG00000040313	PARS2	58	67.819	Bos_taurus
ENSLBEG00000006420	-	87	38.953	WBGene00004190	pars-2	73	38.953	Caenorhabditis_elegans
ENSLBEG00000006420	-	96	66.755	ENSCJAG00000015633	PARS2	79	66.755	Callithrix_jacchus
ENSLBEG00000006420	-	96	67.733	ENSCAFG00020012254	PARS2	79	67.733	Canis_lupus_dingo
ENSLBEG00000006420	-	96	68.085	ENSCHIG00000004850	PARS2	79	68.085	Capra_hircus
ENSLBEG00000006420	-	96	67.287	ENSCAPG00000007226	PARS2	79	67.287	Cavia_aperea
ENSLBEG00000006420	-	96	67.287	ENSCPOG00000025477	PARS2	79	67.287	Cavia_porcellus
ENSLBEG00000006420	-	96	66.489	ENSCLAG00000016176	PARS2	77	66.489	Chinchilla_lanigera
ENSLBEG00000006420	-	96	67.021	ENSCSAG00000000146	PARS2	79	67.021	Chlorocebus_sabaeus
ENSLBEG00000006420	-	94	67.671	ENSCPBG00000003691	PARS2	71	67.671	Chrysemys_picta_bellii
ENSLBEG00000006420	-	92	45.125	ENSCING00000000992	-	86	45.125	Ciona_intestinalis
ENSLBEG00000006420	-	92	42.897	ENSCSAVG00000004773	-	83	42.897	Ciona_savignyi
ENSLBEG00000006420	-	96	67.021	ENSCANG00000018730	PARS2	79	67.021	Colobus_angolensis_palliatus
ENSLBEG00000006420	-	96	66.755	ENSCGRG00001013821	Pars2	79	66.755	Cricetulus_griseus_chok1gshd
ENSLBEG00000006420	-	96	66.489	ENSCGRG00000012554	Pars2	79	66.489	Cricetulus_griseus_crigri
ENSLBEG00000006420	-	96	84.043	ENSCSEG00000017559	pars2	78	84.043	Cynoglossus_semilaevis
ENSLBEG00000006420	-	96	88.298	ENSCVAG00000011283	pars2	77	88.298	Cyprinodon_variegatus
ENSLBEG00000006420	-	96	75.266	ENSDARG00000044404	pars2	79	75.266	Danio_rerio
ENSLBEG00000006420	-	95	67.838	ENSDORG00000013567	Pars2	77	67.838	Dipodomys_ordii
ENSLBEG00000006420	-	95	46.649	FBgn0027082	ProRS-m	81	46.649	Drosophila_melanogaster
ENSLBEG00000006420	-	96	67.374	ENSETEG00000017674	PARS2	80	67.374	Echinops_telfairi
ENSLBEG00000006420	-	96	45.238	ENSEBUG00000012814	pars2	74	45.238	Eptatretus_burgeri
ENSLBEG00000006420	-	96	68.351	ENSEASG00005014595	PARS2	79	68.351	Equus_asinus_asinus
ENSLBEG00000006420	-	96	66.133	ENSFCAG00000022858	PARS2	77	66.133	Felis_catus
ENSLBEG00000006420	-	96	67.287	ENSFALG00000012136	PARS2	73	67.287	Ficedula_albicollis
ENSLBEG00000006420	-	96	66.223	ENSFDAG00000013750	PARS2	79	66.223	Fukomys_damarensis
ENSLBEG00000006420	-	96	88.032	ENSFHEG00000011032	pars2	78	88.032	Fundulus_heteroclitus
ENSLBEG00000006420	-	69	86.585	ENSGMOG00000015469	pars2	61	86.585	Gadus_morhua
ENSLBEG00000006420	-	96	66.043	ENSGALG00000010789	PARS2	62	66.043	Gallus_gallus
ENSLBEG00000006420	-	96	89.096	ENSGACG00000007240	pars2	78	89.096	Gasterosteus_aculeatus
ENSLBEG00000006420	-	82	69.062	ENSGAGG00000014148	PARS2	75	69.062	Gopherus_agassizii
ENSLBEG00000006420	-	96	66.223	ENSGGOG00000005426	PARS2	79	66.223	Gorilla_gorilla
ENSLBEG00000006420	-	96	88.830	ENSHBUG00000013678	pars2	78	88.830	Haplochromis_burtoni
ENSLBEG00000006420	-	96	66.223	ENSHGLG00000003221	PARS2	79	66.223	Heterocephalus_glaber_female
ENSLBEG00000006420	-	96	66.223	ENSHGLG00100002370	PARS2	79	66.223	Heterocephalus_glaber_male
ENSLBEG00000006420	-	96	85.106	ENSHCOG00000006282	pars2	78	85.106	Hippocampus_comes
ENSLBEG00000006420	-	96	75.000	ENSIPUG00000007836	pars2	78	75.000	Ictalurus_punctatus
ENSLBEG00000006420	-	96	67.021	ENSSTOG00000012213	PARS2	79	67.021	Ictidomys_tridecemlineatus
ENSLBEG00000006420	-	96	87.766	ENSKMAG00000012222	pars2	78	87.766	Kryptolebias_marmoratus
ENSLBEG00000006420	-	96	68.351	ENSLACG00000004845	PARS2	79	68.351	Latimeria_chalumnae
ENSLBEG00000006420	-	96	72.074	ENSLOCG00000008678	pars2	76	72.074	Lepisosteus_oculatus
ENSLBEG00000006420	-	96	68.717	ENSLAFG00000008727	PARS2	77	68.717	Loxodonta_africana
ENSLBEG00000006420	-	96	66.223	ENSMMUG00000032084	PARS2	79	66.223	Macaca_mulatta
ENSLBEG00000006420	-	96	66.489	ENSMLEG00000027947	PARS2	79	66.489	Mandrillus_leucophaeus
ENSLBEG00000006420	-	96	89.096	ENSMAMG00000008843	pars2	78	89.096	Mastacembelus_armatus
ENSLBEG00000006420	-	96	89.096	ENSMZEG00005018397	pars2	78	89.096	Maylandia_zebra
ENSLBEG00000006420	-	96	64.973	ENSMGAG00000011416	PARS2	79	64.973	Meleagris_gallopavo
ENSLBEG00000006420	-	96	66.489	ENSMAUG00000022043	Pars2	79	66.489	Mesocricetus_auratus
ENSLBEG00000006420	-	96	68.085	ENSMOCG00000018351	Pars2	79	68.085	Microtus_ochrogaster
ENSLBEG00000006420	-	96	88.032	ENSMMOG00000006550	pars2	78	88.032	Mola_mola
ENSLBEG00000006420	-	96	64.362	ENSMODG00000025123	PARS2	78	64.362	Monodelphis_domestica
ENSLBEG00000006420	-	96	85.638	ENSMALG00000018954	pars2	78	85.638	Monopterus_albus
ENSLBEG00000006420	-	96	66.755	MGP_CAROLIEiJ_G0026236	Pars2	79	66.755	Mus_caroli
ENSLBEG00000006420	-	96	66.755	ENSMUSG00000043572	Pars2	79	66.755	Mus_musculus
ENSLBEG00000006420	-	96	66.755	MGP_PahariEiJ_G0028570	Pars2	78	66.755	Mus_pahari
ENSLBEG00000006420	-	96	66.755	MGP_SPRETEiJ_G0027205	Pars2	79	66.755	Mus_spretus
ENSLBEG00000006420	-	96	66.667	ENSMPUG00000020180	PARS2	79	66.667	Mustela_putorius_furo
ENSLBEG00000006420	-	96	67.021	ENSMLUG00000016899	PARS2	73	67.021	Myotis_lucifugus
ENSLBEG00000006420	-	96	65.957	ENSNGAG00000015140	Pars2	79	65.957	Nannospalax_galili
ENSLBEG00000006420	-	96	89.096	ENSNBRG00000020304	pars2	78	89.096	Neolamprologus_brichardi
ENSLBEG00000006420	-	96	66.755	ENSNLEG00000003040	PARS2	79	66.755	Nomascus_leucogenys
ENSLBEG00000006420	-	96	67.819	ENSOPRG00000016102	PARS2	79	67.819	Ochotona_princeps
ENSLBEG00000006420	-	96	66.489	ENSODEG00000020020	PARS2	79	66.489	Octodon_degus
ENSLBEG00000006420	-	96	89.894	ENSONIG00000009984	pars2	78	89.894	Oreochromis_niloticus
ENSLBEG00000006420	-	96	60.106	ENSOANG00000007752	PARS2	79	60.106	Ornithorhynchus_anatinus
ENSLBEG00000006420	-	96	67.021	ENSOCUG00000001045	PARS2	63	67.021	Oryctolagus_cuniculus
ENSLBEG00000006420	-	96	84.840	ENSORLG00000025001	pars2	81	84.840	Oryzias_latipes
ENSLBEG00000006420	-	96	84.309	ENSORLG00020011316	pars2	78	84.309	Oryzias_latipes_hni
ENSLBEG00000006420	-	96	84.309	ENSORLG00015007461	pars2	83	84.309	Oryzias_latipes_hsok
ENSLBEG00000006420	-	96	86.436	ENSOMEG00000007136	pars2	78	86.436	Oryzias_melastigma
ENSLBEG00000006420	-	96	67.819	ENSOGAG00000031493	PARS2	79	67.819	Otolemur_garnettii
ENSLBEG00000006420	-	96	68.351	ENSOARG00000009941	PARS2	78	68.351	Ovis_aries
ENSLBEG00000006420	-	96	66.489	ENSPPAG00000001589	PARS2	76	66.489	Pan_paniscus
ENSLBEG00000006420	-	96	65.600	ENSPPRG00000020447	PARS2	79	65.600	Panthera_pardus
ENSLBEG00000006420	-	96	65.600	ENSPTIG00000004031	PARS2	79	65.600	Panthera_tigris_altaica
ENSLBEG00000006420	-	96	66.489	ENSPTRG00000000776	PARS2	79	66.489	Pan_troglodytes
ENSLBEG00000006420	-	96	77.926	ENSPKIG00000001336	pars2	71	77.926	Paramormyrops_kingsleyae
ENSLBEG00000006420	-	96	81.649	ENSPMGG00000021953	pars2	80	81.649	Periophthalmus_magnuspinnatus
ENSLBEG00000006420	-	96	66.489	ENSPEMG00000004864	Pars2	79	66.489	Peromyscus_maniculatus_bairdii
ENSLBEG00000006420	-	96	60.372	ENSPMAG00000009138	pars2	89	60.372	Petromyzon_marinus
ENSLBEG00000006420	-	96	65.426	ENSPCIG00000018193	PARS2	79	65.426	Phascolarctos_cinereus
ENSLBEG00000006420	-	96	88.830	ENSPFOG00000010522	pars2	78	88.830	Poecilia_formosa
ENSLBEG00000006420	-	96	88.830	ENSPLAG00000022589	pars2	76	88.830	Poecilia_latipinna
ENSLBEG00000006420	-	96	88.830	ENSPMEG00000007151	pars2	76	88.830	Poecilia_mexicana
ENSLBEG00000006420	-	96	88.564	ENSPREG00000009788	pars2	78	88.564	Poecilia_reticulata
ENSLBEG00000006420	-	78	67.657	ENSPCAG00000012707	PARS2	100	67.657	Procavia_capensis
ENSLBEG00000006420	-	96	88.830	ENSPNYG00000012698	pars2	78	88.830	Pundamilia_nyererei
ENSLBEG00000006420	-	96	76.596	ENSPNAG00000003869	pars2	78	76.596	Pygocentrus_nattereri
ENSLBEG00000006420	-	96	67.021	ENSRNOG00000007327	Pars2	79	67.021	Rattus_norvegicus
ENSLBEG00000006420	-	96	67.021	ENSRBIG00000030034	PARS2	79	67.021	Rhinopithecus_bieti
ENSLBEG00000006420	-	96	67.021	ENSRROG00000000487	PARS2	79	67.021	Rhinopithecus_roxellana
ENSLBEG00000006420	-	84	41.954	YER087W	-	57	41.954	Saccharomyces_cerevisiae
ENSLBEG00000006420	-	96	66.489	ENSSHAG00000004206	PARS2	78	66.489	Sarcophilus_harrisii
ENSLBEG00000006420	-	96	77.394	ENSSFOG00015000170	pars2	77	77.394	Scleropages_formosus
ENSLBEG00000006420	-	96	88.032	ENSSMAG00000020710	pars2	72	88.032	Scophthalmus_maximus
ENSLBEG00000006420	-	96	89.096	ENSSDUG00000012630	pars2	84	89.096	Seriola_dumerili
ENSLBEG00000006420	-	56	93.939	ENSSLDG00000003353	pars2	50	93.939	Seriola_lalandi_dorsalis
ENSLBEG00000006420	-	61	63.866	ENSSARG00000006071	-	99	63.866	Sorex_araneus
ENSLBEG00000006420	-	96	66.667	ENSSPUG00000014688	PARS2	79	66.667	Sphenodon_punctatus
ENSLBEG00000006420	-	96	88.298	ENSSPAG00000023092	pars2	78	88.298	Stegastes_partitus
ENSLBEG00000006420	-	93	68.320	ENSSSCG00000003843	PARS2	79	68.320	Sus_scrofa
ENSLBEG00000006420	-	96	66.133	ENSTGUG00000009489	PARS2	84	65.957	Taeniopygia_guttata
ENSLBEG00000006420	-	96	85.904	ENSTRUG00000018560	pars2	78	85.904	Takifugu_rubripes
ENSLBEG00000006420	-	96	86.170	ENSTNIG00000018113	pars2	78	86.170	Tetraodon_nigroviridis
ENSLBEG00000006420	-	73	61.268	ENSTTRG00000000716	PARS2	59	61.268	Tursiops_truncatus
ENSLBEG00000006420	-	96	68.000	ENSUAMG00000003814	-	75	68.000	Ursus_americanus
ENSLBEG00000006420	-	96	68.000	ENSUAMG00000010990	-	75	68.000	Ursus_americanus
ENSLBEG00000006420	-	96	61.867	ENSUMAG00000022250	PARS2	74	61.867	Ursus_maritimus
ENSLBEG00000006420	-	91	69.382	ENSVVUG00000026785	PARS2	75	69.382	Vulpes_vulpes
ENSLBEG00000006420	-	96	88.032	ENSXCOG00000008574	pars2	80	88.032	Xiphophorus_couchianus
ENSLBEG00000006420	-	96	88.032	ENSXMAG00000002269	pars2	78	88.032	Xiphophorus_maculatus