EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000006690 (Gene tree)
Gene ID: 109999300
Gene Symbol: zgc:162879
Alias: -
Full Name: ras and EF-hand domain-containing protein-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 12651 bases
Position: chrFKLU01000550.1:115900-128550
Accession: 109999300
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000008776	MMR_HSR1	PF01926.23	4.2e-05	1	1
ENSLBEP00000008732	MMR_HSR1	PF01926.23	4.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000009245	-	1866	-	ENSLBEP00000008776	621 (aa)	-	-
ENSLBET00000009196	-	3027	XM_020654322	ENSLBEP00000008732	664 (aa)	XP_020509978	UPI0009B486AD

Gene Model

Click here to download ENSLBEG00000006690's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000006690's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000006690	zgc:162879	80	58.559	ENSLBEG00000021098	-	98	37.168

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000006690	zgc:162879	99	78.149	ENSAPOG00000008539	zgc:162879	99	78.149	Acanthochromis_polyacanthus
ENSLBEG00000006690	zgc:162879	100	77.143	ENSACIG00000023717	zgc:162879	99	77.143	Amphilophus_citrinellus
ENSLBEG00000006690	zgc:162879	84	77.599	ENSAOCG00000006210	zgc:162879	87	77.599	Amphiprion_ocellaris
ENSLBEG00000006690	zgc:162879	99	78.756	ENSAPEG00000017489	zgc:162879	99	78.756	Amphiprion_percula
ENSLBEG00000006690	zgc:162879	100	79.970	ENSATEG00000006102	zgc:162879	99	79.970	Anabas_testudineus
ENSLBEG00000006690	zgc:162879	100	76.355	ENSACLG00000021066	zgc:162879	99	75.489	Astatotilapia_calliptera
ENSLBEG00000006690	zgc:162879	100	62.146	ENSAMXG00000007430	zgc:162879	99	62.146	Astyanax_mexicanus
ENSLBEG00000006690	zgc:162879	100	54.354	ENSCSEG00000013699	zgc:162879	99	54.354	Cynoglossus_semilaevis
ENSLBEG00000006690	zgc:162879	100	69.428	ENSCVAG00000014510	zgc:162879	99	69.428	Cyprinodon_variegatus
ENSLBEG00000006690	zgc:162879	100	59.699	ENSDARG00000074163	zgc:162879	99	59.699	Danio_rerio
ENSLBEG00000006690	zgc:162879	100	58.852	ENSELUG00000019483	zgc:162879	98	62.092	Esox_lucius
ENSLBEG00000006690	zgc:162879	76	68.254	ENSFHEG00000022549	zgc:162879	99	68.254	Fundulus_heteroclitus
ENSLBEG00000006690	zgc:162879	100	69.277	ENSGAFG00000001313	zgc:162879	99	69.277	Gambusia_affinis
ENSLBEG00000006690	zgc:162879	100	72.150	ENSGACG00000010798	zgc:162879	99	72.150	Gasterosteus_aculeatus
ENSLBEG00000006690	zgc:162879	100	76.391	ENSHBUG00000016335	zgc:162879	99	76.391	Haplochromis_burtoni
ENSLBEG00000006690	zgc:162879	100	49.684	ENSHCOG00000012026	zgc:162879	99	57.026	Hippocampus_comes
ENSLBEG00000006690	zgc:162879	100	65.263	ENSKMAG00000016246	zgc:162879	99	65.263	Kryptolebias_marmoratus
ENSLBEG00000006690	zgc:162879	95	57.333	ENSLACG00000014082	-	87	57.333	Latimeria_chalumnae
ENSLBEG00000006690	zgc:162879	99	59.287	ENSLOCG00000014347	zgc:162879	98	59.287	Lepisosteus_oculatus
ENSLBEG00000006690	zgc:162879	100	76.054	ENSMAMG00000008875	zgc:162879	99	76.025	Mastacembelus_armatus
ENSLBEG00000006690	zgc:162879	100	76.205	ENSMZEG00005022256	zgc:162879	99	76.205	Maylandia_zebra
ENSLBEG00000006690	zgc:162879	100	67.970	ENSNBRG00000020110	zgc:162879	99	67.970	Neolamprologus_brichardi
ENSLBEG00000006690	zgc:162879	99	72.571	ENSONIG00000015165	zgc:162879	99	72.571	Oreochromis_niloticus
ENSLBEG00000006690	zgc:162879	100	64.962	ENSORLG00015017960	zgc:162879	99	64.962	Oryzias_latipes_hsok
ENSLBEG00000006690	zgc:162879	100	56.135	ENSPKIG00000020661	zgc:162879	99	56.703	Paramormyrops_kingsleyae
ENSLBEG00000006690	zgc:162879	100	69.578	ENSPFOG00000006354	zgc:162879	99	69.578	Poecilia_formosa
ENSLBEG00000006690	zgc:162879	100	69.578	ENSPLAG00000020643	zgc:162879	99	69.578	Poecilia_latipinna
ENSLBEG00000006690	zgc:162879	100	69.277	ENSPMEG00000014713	zgc:162879	99	69.277	Poecilia_mexicana
ENSLBEG00000006690	zgc:162879	100	69.023	ENSPNYG00000010530	zgc:162879	99	69.023	Pundamilia_nyererei
ENSLBEG00000006690	zgc:162879	100	60.417	ENSPNAG00000012022	zgc:162879	99	60.417	Pygocentrus_nattereri
ENSLBEG00000006690	zgc:162879	85	50.086	ENSSFOG00015023774	zgc:162879	92	50.086	Scleropages_formosus
ENSLBEG00000006690	zgc:162879	100	74.699	ENSSMAG00000001513	zgc:162879	99	75.791	Scophthalmus_maximus
ENSLBEG00000006690	zgc:162879	100	82.078	ENSSDUG00000011478	zgc:162879	99	82.078	Seriola_dumerili
ENSLBEG00000006690	zgc:162879	100	81.928	ENSSLDG00000000877	zgc:162879	99	81.928	Seriola_lalandi_dorsalis
ENSLBEG00000006690	zgc:162879	99	71.017	ENSSPAG00000010598	zgc:162879	99	71.314	Stegastes_partitus
ENSLBEG00000006690	zgc:162879	99	67.949	ENSTNIG00000019239	zgc:162879	99	67.949	Tetraodon_nigroviridis
ENSLBEG00000006690	zgc:162879	99	41.643	ENSXETG00000015491	rasef	98	41.643	Xenopus_tropicalis
ENSLBEG00000006690	zgc:162879	76	65.618	ENSXCOG00000020244	zgc:162879	99	65.618	Xiphophorus_couchianus
ENSLBEG00000006690	zgc:162879	100	69.578	ENSXMAG00000002846	zgc:162879	99	69.578	Xiphophorus_maculatus