EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000007061 (Gene tree)
Gene ID: 109981418
Gene Symbol: msi2a
Alias: cb746|fi47b09|msi2|wu:fb02d08|wu:fi32d12|wu:fi47b09
Full Name: musashi RNA binding protein 2
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 257952 bases
Position: chrFKLU01000031.1:857604-1115555
Accession: 109981418
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000009150	RRM_1	PF00076.22	5.2e-33	1	2
ENSLBEP00000009150	RRM_1	PF00076.22	5.2e-33	2	2
ENSLBEP00000009126	RRM_1	PF00076.22	5.2e-33	1	2
ENSLBEP00000009126	RRM_1	PF00076.22	5.2e-33	2	2
ENSLBEP00000009192	RRM_1	PF00076.22	5.7e-33	1	2
ENSLBEP00000009192	RRM_1	PF00076.22	5.7e-33	2	2
ENSLBEP00000009184	RRM_1	PF00076.22	4.7e-29	1	2
ENSLBEP00000009184	RRM_1	PF00076.22	4.7e-29	2	2
ENSLBEP00000009214	RRM_1	PF00076.22	2e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000009684	-	942	XM_020630197	ENSLBEP00000009184	313 (aa)	XP_020485853	-
ENSLBET00000009644	-	1253	XM_020630188	ENSLBEP00000009150	407 (aa)	XP_020485844	UPI0004963CD1
ENSLBET00000009617	-	1227	XM_020630187	ENSLBEP00000009126	408 (aa)	XP_020485843	UPI0009B3B6F2
ENSLBET00000009693	-	1266	-	ENSLBEP00000009192	421 (aa)	-	-
ENSLBET00000009718	-	462	-	ENSLBEP00000009214	153 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000007061's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000007061's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000007061	msi2a	95	74.309	ENSLBEG00000026223	-	100	72.928
ENSLBEG00000007061	msi2a	75	43.966	ENSLBEG00000016767	hnrnpa3	93	36.782
ENSLBEG00000007061	msi2a	88	48.507	ENSLBEG00000027508	hnrnpd	72	41.202
ENSLBEG00000007061	msi2a	97	73.529	ENSLBEG00000008789	MSI1	96	76.772
ENSLBEG00000007061	msi2a	74	38.938	ENSLBEG00000022827	tardbp	53	35.119
ENSLBEG00000007061	msi2a	75	45.690	ENSLBEG00000010010	hnrnpa1a	53	40.909
ENSLBEG00000007061	msi2a	78	40.000	ENSLBEG00000006362	-	98	37.438
ENSLBEG00000007061	msi2a	88	51.049	ENSLBEG00000004479	-	58	51.049
ENSLBEG00000007061	msi2a	78	52.101	ENSLBEG00000006595	hnrnpaba	63	44.292
ENSLBEG00000007061	msi2a	80	34.783	ENSLBEG00000009909	rbm39b	57	36.667
ENSLBEG00000007061	msi2a	98	72.026	ENSLBEG00000001375	-	97	70.073

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000007061	msi2a	100	88.110	ENSG00000153944	MSI2	97	93.227	Homo_sapiens
ENSLBEG00000007061	msi2a	100	100.000	ENSAPOG00000001658	msi2a	100	100.000	Acanthochromis_polyacanthus
ENSLBEG00000007061	msi2a	98	84.356	ENSAMEG00000002697	MSI2	99	85.358	Ailuropoda_melanoleuca
ENSLBEG00000007061	msi2a	100	90.511	ENSACIG00000009475	msi2a	100	90.511	Amphilophus_citrinellus
ENSLBEG00000007061	msi2a	88	88.889	ENSAOCG00000014822	msi2a	69	91.111	Amphiprion_ocellaris
ENSLBEG00000007061	msi2a	100	100.000	ENSAPEG00000007706	msi2a	100	100.000	Amphiprion_percula
ENSLBEG00000007061	msi2a	93	93.165	ENSATEG00000003301	-	100	93.165	Anabas_testudineus
ENSLBEG00000007061	msi2a	100	100.000	ENSATEG00000010498	msi2a	100	100.000	Anabas_testudineus
ENSLBEG00000007061	msi2a	89	93.478	ENSACAG00000005452	MSI2	88	75.871	Anolis_carolinensis
ENSLBEG00000007061	msi2a	100	88.110	ENSANAG00000037827	MSI2	97	93.227	Aotus_nancymaae
ENSLBEG00000007061	msi2a	100	99.509	ENSACLG00000007752	msi2a	100	99.588	Astatotilapia_calliptera
ENSLBEG00000007061	msi2a	100	89.809	ENSAMXG00000032796	msi2a	97	96.414	Astyanax_mexicanus
ENSLBEG00000007061	msi2a	100	94.569	ENSAMXG00000010474	msi2b	100	94.569	Astyanax_mexicanus
ENSLBEG00000007061	msi2a	98	88.961	ENSBTAG00000004406	MSI2	94	94.348	Bos_taurus
ENSLBEG00000007061	msi2a	87	70.339	WBGene00003423	msi-1	70	70.339	Caenorhabditis_elegans
ENSLBEG00000007061	msi2a	100	88.110	ENSCJAG00000013998	MSI2	97	93.227	Callithrix_jacchus
ENSLBEG00000007061	msi2a	93	87.702	ENSCAFG00020025620	MSI2	81	85.893	Canis_lupus_dingo
ENSLBEG00000007061	msi2a	100	87.195	ENSCHIG00000016580	MSI2	97	91.633	Capra_hircus
ENSLBEG00000007061	msi2a	93	88.298	ENSCPOG00000034042	MSI2	99	88.298	Cavia_porcellus
ENSLBEG00000007061	msi2a	100	88.110	ENSCCAG00000033927	MSI2	97	93.227	Cebus_capucinus
ENSLBEG00000007061	msi2a	93	92.444	ENSCATG00000040879	MSI2	97	92.829	Cercocebus_atys
ENSLBEG00000007061	msi2a	100	83.526	ENSCLAG00000014325	MSI2	100	83.526	Chinchilla_lanigera
ENSLBEG00000007061	msi2a	100	88.110	ENSCSAG00000005633	MSI2	97	93.227	Chlorocebus_sabaeus
ENSLBEG00000007061	msi2a	89	65.827	ENSCHOG00000008660	MSI2	83	86.275	Choloepus_hoffmanni
ENSLBEG00000007061	msi2a	93	94.581	ENSCPBG00000009942	MSI2	89	94.475	Chrysemys_picta_bellii
ENSLBEG00000007061	msi2a	75	80.645	ENSCING00000018579	-	90	53.659	Ciona_intestinalis
ENSLBEG00000007061	msi2a	76	65.873	ENSCSAVG00000010397	-	67	68.421	Ciona_savignyi
ENSLBEG00000007061	msi2a	93	92.444	ENSCANG00000036414	MSI2	96	92.500	Colobus_angolensis_palliatus
ENSLBEG00000007061	msi2a	100	87.538	ENSCGRG00001013330	Msi2	97	92.829	Cricetulus_griseus_chok1gshd
ENSLBEG00000007061	msi2a	98	84.098	ENSCGRG00000003141	Msi2	97	85.093	Cricetulus_griseus_crigri
ENSLBEG00000007061	msi2a	100	81.173	ENSCSEG00000003266	-	100	81.173	Cynoglossus_semilaevis
ENSLBEG00000007061	msi2a	81	81.443	ENSCSEG00000013557	msi2a	79	93.846	Cynoglossus_semilaevis
ENSLBEG00000007061	msi2a	88	97.037	ENSCSEG00000013549	msi2a	100	77.596	Cynoglossus_semilaevis
ENSLBEG00000007061	msi2a	96	99.667	ENSCVAG00000017075	msi2a	99	99.667	Cyprinodon_variegatus
ENSLBEG00000007061	msi2a	100	93.627	ENSDARG00000032614	msi2b	100	97.647	Danio_rerio
ENSLBEG00000007061	msi2a	100	85.749	ENSDARG00000033901	msi2a	100	84.275	Danio_rerio
ENSLBEG00000007061	msi2a	93	93.056	ENSDNOG00000014501	MSI2	100	93.056	Dasypus_novemcinctus
ENSLBEG00000007061	msi2a	74	96.460	ENSDORG00000028440	-	100	96.460	Dipodomys_ordii
ENSLBEG00000007061	msi2a	81	81.726	ENSDORG00000005394	Msi2	79	89.231	Dipodomys_ordii
ENSLBEG00000007061	msi2a	74	86.667	FBgn0260943	Rbp6	88	65.278	Drosophila_melanogaster
ENSLBEG00000007061	msi2a	75	100.000	ENSETEG00000012450	-	64	72.368	Echinops_telfairi
ENSLBEG00000007061	msi2a	93	63.578	ENSEBUG00000006732	msi2a	75	79.524	Eptatretus_burgeri
ENSLBEG00000007061	msi2a	93	90.301	ENSEASG00005002965	MSI2	90	92.411	Equus_asinus_asinus
ENSLBEG00000007061	msi2a	93	91.739	ENSECAG00000011435	MSI2	100	81.356	Equus_caballus
ENSLBEG00000007061	msi2a	86	77.470	ENSEEUG00000007810	MSI2	100	77.470	Erinaceus_europaeus
ENSLBEG00000007061	msi2a	100	88.657	ENSELUG00000001361	msi2b	100	88.657	Esox_lucius
ENSLBEG00000007061	msi2a	100	95.208	ENSELUG00000011747	msi2a	100	95.208	Esox_lucius
ENSLBEG00000007061	msi2a	100	88.110	ENSFCAG00000041686	MSI2	97	93.227	Felis_catus
ENSLBEG00000007061	msi2a	88	78.519	ENSFCAG00000033787	-	82	75.000	Felis_catus
ENSLBEG00000007061	msi2a	97	85.358	ENSFDAG00000016118	MSI2	100	85.358	Fukomys_damarensis
ENSLBEG00000007061	msi2a	100	99.509	ENSFHEG00000000084	msi2a	100	99.509	Fundulus_heteroclitus
ENSLBEG00000007061	msi2a	68	97.115	ENSGMOG00000007596	-	100	97.115	Gadus_morhua
ENSLBEG00000007061	msi2a	100	82.659	ENSGALG00000005567	MSI2	100	82.659	Gallus_gallus
ENSLBEG00000007061	msi2a	88	100.000	ENSGAFG00000006974	msi2a	96	94.545	Gambusia_affinis
ENSLBEG00000007061	msi2a	100	87.547	ENSGAGG00000016542	MSI2	100	84.868	Gopherus_agassizii
ENSLBEG00000007061	msi2a	93	92.444	ENSGGOG00000013182	MSI2	96	92.500	Gorilla_gorilla
ENSLBEG00000007061	msi2a	100	99.509	ENSHBUG00000020800	msi2a	100	99.588	Haplochromis_burtoni
ENSLBEG00000007061	msi2a	100	74.566	ENSHGLG00000012444	MSI2	100	74.566	Heterocephalus_glaber_female
ENSLBEG00000007061	msi2a	78	84.058	ENSHGLG00100003744	MSI2	100	84.058	Heterocephalus_glaber_male
ENSLBEG00000007061	msi2a	74	96.460	ENSHGLG00100004028	-	87	96.491	Heterocephalus_glaber_male
ENSLBEG00000007061	msi2a	95	82.422	ENSHCOG00000017241	-	98	71.571	Hippocampus_comes
ENSLBEG00000007061	msi2a	100	98.280	ENSHCOG00000000266	msi2a	100	98.280	Hippocampus_comes
ENSLBEG00000007061	msi2a	100	92.013	ENSIPUG00000021097	msi2a	100	95.062	Ictalurus_punctatus
ENSLBEG00000007061	msi2a	100	90.415	ENSIPUG00000003732	msi2b	100	90.415	Ictalurus_punctatus
ENSLBEG00000007061	msi2a	93	88.298	ENSSTOG00000007884	MSI2	99	88.298	Ictidomys_tridecemlineatus
ENSLBEG00000007061	msi2a	78	78.894	ENSJJAG00000006292	-	100	78.392	Jaculus_jaculus
ENSLBEG00000007061	msi2a	74	96.460	ENSJJAG00000009467	-	100	96.460	Jaculus_jaculus
ENSLBEG00000007061	msi2a	100	94.349	ENSKMAG00000009494	msi2a	97	99.602	Kryptolebias_marmoratus
ENSLBEG00000007061	msi2a	59	92.308	ENSLACG00000016798	MSI2	100	91.089	Latimeria_chalumnae
ENSLBEG00000007061	msi2a	100	90.172	ENSLOCG00000004675	msi2b	100	88.698	Lepisosteus_oculatus
ENSLBEG00000007061	msi2a	93	92.444	ENSMFAG00000003775	MSI2	96	92.500	Macaca_fascicularis
ENSLBEG00000007061	msi2a	93	92.444	ENSMMUG00000002069	MSI2	96	92.500	Macaca_mulatta
ENSLBEG00000007061	msi2a	100	88.110	ENSMNEG00000045275	MSI2	97	93.227	Macaca_nemestrina
ENSLBEG00000007061	msi2a	93	92.444	ENSMLEG00000033888	MSI2	96	92.500	Mandrillus_leucophaeus
ENSLBEG00000007061	msi2a	100	99.755	ENSMAMG00000010503	msi2a	100	100.000	Mastacembelus_armatus
ENSLBEG00000007061	msi2a	100	90.096	ENSMAMG00000002488	-	99	94.074	Mastacembelus_armatus
ENSLBEG00000007061	msi2a	100	99.509	ENSMZEG00005007676	msi2a	100	99.588	Maylandia_zebra
ENSLBEG00000007061	msi2a	100	82.997	ENSMAUG00000003862	Msi2	100	82.997	Mesocricetus_auratus
ENSLBEG00000007061	msi2a	100	88.110	ENSMICG00000013598	-	97	93.227	Microcebus_murinus
ENSLBEG00000007061	msi2a	88	82.963	ENSMICG00000032913	-	96	79.710	Microcebus_murinus
ENSLBEG00000007061	msi2a	100	83.237	ENSMOCG00000005820	Msi2	100	83.237	Microtus_ochrogaster
ENSLBEG00000007061	msi2a	96	85.507	ENSMMOG00000008348	msi2a	93	99.160	Mola_mola
ENSLBEG00000007061	msi2a	78	83.575	ENSMODG00000014790	MSI2	100	83.575	Monodelphis_domestica
ENSLBEG00000007061	msi2a	100	99.346	ENSMALG00000000071	msi2a	100	100.000	Monopterus_albus
ENSLBEG00000007061	msi2a	100	87.805	MGP_CAROLIEiJ_G0016948	Msi2	100	96.460	Mus_caroli
ENSLBEG00000007061	msi2a	100	87.805	ENSMUSG00000069769	Msi2	100	96.460	Mus_musculus
ENSLBEG00000007061	msi2a	100	87.805	MGP_PahariEiJ_G0018079	Msi2	100	96.460	Mus_pahari
ENSLBEG00000007061	msi2a	100	87.805	MGP_SPRETEiJ_G0017795	Msi2	100	96.460	Mus_spretus
ENSLBEG00000007061	msi2a	98	89.286	ENSMPUG00000015377	MSI2	94	94.348	Mustela_putorius_furo
ENSLBEG00000007061	msi2a	98	89.286	ENSMLUG00000007865	MSI2	94	93.913	Myotis_lucifugus
ENSLBEG00000007061	msi2a	100	83.237	ENSNGAG00000017807	Msi2	100	83.237	Nannospalax_galili
ENSLBEG00000007061	msi2a	100	99.361	ENSNBRG00000014596	msi2a	100	99.361	Neolamprologus_brichardi
ENSLBEG00000007061	msi2a	93	92.444	ENSNLEG00000008059	MSI2	95	93.301	Nomascus_leucogenys
ENSLBEG00000007061	msi2a	74	100.000	ENSOPRG00000000872	-	64	83.553	Ochotona_princeps
ENSLBEG00000007061	msi2a	100	83.526	ENSODEG00000011974	MSI2	100	83.526	Octodon_degus
ENSLBEG00000007061	msi2a	88	100.000	ENSONIG00000001972	msi2a	84	100.000	Oreochromis_niloticus
ENSLBEG00000007061	msi2a	91	91.324	ENSOANG00000005667	MSI2	99	78.960	Ornithorhynchus_anatinus
ENSLBEG00000007061	msi2a	98	89.286	ENSOCUG00000010440	MSI2	94	94.348	Oryctolagus_cuniculus
ENSLBEG00000007061	msi2a	100	97.125	ENSORLG00000009671	msi2a	100	100.000	Oryzias_latipes
ENSLBEG00000007061	msi2a	100	99.754	ENSORLG00020021556	msi2a	100	100.000	Oryzias_latipes_hni
ENSLBEG00000007061	msi2a	100	97.125	ENSORLG00015004592	msi2a	100	100.000	Oryzias_latipes_hsok
ENSLBEG00000007061	msi2a	100	95.086	ENSOMEG00000000146	msi2a	100	100.000	Oryzias_melastigma
ENSLBEG00000007061	msi2a	98	85.714	ENSOGAG00000005621	MSI2	97	89.565	Otolemur_garnettii
ENSLBEG00000007061	msi2a	97	85.358	ENSPPAG00000037697	MSI2	96	92.500	Pan_paniscus
ENSLBEG00000007061	msi2a	97	90.429	ENSPPRG00000001848	MSI2	96	92.500	Panthera_pardus
ENSLBEG00000007061	msi2a	84	71.875	ENSPTIG00000021873	-	93	73.529	Panthera_tigris_altaica
ENSLBEG00000007061	msi2a	93	87.742	ENSPTIG00000021678	MSI2	96	87.742	Panthera_tigris_altaica
ENSLBEG00000007061	msi2a	93	92.444	ENSPTRG00000009437	MSI2	96	92.500	Pan_troglodytes
ENSLBEG00000007061	msi2a	100	88.110	ENSPANG00000022319	MSI2	97	93.227	Papio_anubis
ENSLBEG00000007061	msi2a	96	85.350	ENSPKIG00000007038	-	96	93.004	Paramormyrops_kingsleyae
ENSLBEG00000007061	msi2a	59	95.604	ENSPKIG00000017107	-	81	95.604	Paramormyrops_kingsleyae
ENSLBEG00000007061	msi2a	100	89.394	ENSPSIG00000008618	MSI2	100	81.176	Pelodiscus_sinensis
ENSLBEG00000007061	msi2a	100	99.361	ENSPMGG00000005888	msi2a	100	99.361	Periophthalmus_magnuspinnatus
ENSLBEG00000007061	msi2a	74	96.460	ENSPEMG00000021793	-	100	96.460	Peromyscus_maniculatus_bairdii
ENSLBEG00000007061	msi2a	88	96.296	ENSPCIG00000006063	MSI2	100	81.921	Phascolarctos_cinereus
ENSLBEG00000007061	msi2a	69	99.048	ENSPFOG00000019337	MSI2	92	99.048	Poecilia_formosa
ENSLBEG00000007061	msi2a	88	100.000	ENSPLAG00000000436	msi2a	76	96.479	Poecilia_latipinna
ENSLBEG00000007061	msi2a	88	88.889	ENSPMEG00000013247	msi2a	75	100.000	Poecilia_mexicana
ENSLBEG00000007061	msi2a	100	99.754	ENSPREG00000000881	msi2a	100	99.754	Poecilia_reticulata
ENSLBEG00000007061	msi2a	93	89.916	ENSPPYG00000008244	-	100	89.916	Pongo_abelii
ENSLBEG00000007061	msi2a	90	64.286	ENSPCAG00000010552	MSI2	95	89.231	Procavia_capensis
ENSLBEG00000007061	msi2a	75	96.491	ENSPCOG00000019195	-	100	93.878	Propithecus_coquereli
ENSLBEG00000007061	msi2a	93	85.274	ENSPVAG00000017053	MSI2	99	85.274	Pteropus_vampyrus
ENSLBEG00000007061	msi2a	100	99.509	ENSPNYG00000018393	msi2a	100	99.588	Pundamilia_nyererei
ENSLBEG00000007061	msi2a	100	94.268	ENSPNAG00000000844	msi2b	100	94.268	Pygocentrus_nattereri
ENSLBEG00000007061	msi2a	100	94.586	ENSPNAG00000014957	msi2a	100	94.586	Pygocentrus_nattereri
ENSLBEG00000007061	msi2a	93	92.806	ENSRNOG00000025338	Msi2	100	92.806	Rattus_norvegicus
ENSLBEG00000007061	msi2a	59	73.626	ENSRBIG00000032064	-	84	88.158	Rhinopithecus_bieti
ENSLBEG00000007061	msi2a	75	96.491	ENSRROG00000034421	-	100	93.893	Rhinopithecus_roxellana
ENSLBEG00000007061	msi2a	93	92.857	ENSSBOG00000026425	MSI2	96	92.500	Saimiri_boliviensis_boliviensis
ENSLBEG00000007061	msi2a	97	85.358	ENSSHAG00000008672	MSI2	100	85.358	Sarcophilus_harrisii
ENSLBEG00000007061	msi2a	97	87.459	ENSSFOG00015021687	-	97	93.243	Scleropages_formosus
ENSLBEG00000007061	msi2a	95	83.471	ENSSFOG00015012168	msi2b	100	68.998	Scleropages_formosus
ENSLBEG00000007061	msi2a	100	99.755	ENSSMAG00000018484	msi2a	100	100.000	Scophthalmus_maximus
ENSLBEG00000007061	msi2a	100	84.478	ENSSDUG00000021968	-	99	94.074	Seriola_dumerili
ENSLBEG00000007061	msi2a	100	100.000	ENSSDUG00000014507	msi2a	100	100.000	Seriola_dumerili
ENSLBEG00000007061	msi2a	59	79.121	ENSSLDG00000021332	-	68	79.121	Seriola_lalandi_dorsalis
ENSLBEG00000007061	msi2a	100	100.000	ENSSLDG00000017172	msi2a	100	100.000	Seriola_lalandi_dorsalis
ENSLBEG00000007061	msi2a	88	95.556	ENSSPUG00000000913	-	94	95.556	Sphenodon_punctatus
ENSLBEG00000007061	msi2a	100	100.000	ENSSPAG00000017793	msi2a	100	100.000	Stegastes_partitus
ENSLBEG00000007061	msi2a	100	88.110	ENSSSCG00000038505	MSI2	100	93.416	Sus_scrofa
ENSLBEG00000007061	msi2a	78	84.058	ENSTGUG00000008452	MSI2	100	84.058	Taeniopygia_guttata
ENSLBEG00000007061	msi2a	97	98.477	ENSTRUG00000021248	msi2a	96	97.985	Takifugu_rubripes
ENSLBEG00000007061	msi2a	88	77.778	ENSTBEG00000001241	MSI2	73	77.686	Tupaia_belangeri
ENSLBEG00000007061	msi2a	93	84.454	ENSTTRG00000002189	MSI2	91	94.737	Tursiops_truncatus
ENSLBEG00000007061	msi2a	98	89.286	ENSUAMG00000000700	MSI2	96	94.595	Ursus_americanus
ENSLBEG00000007061	msi2a	89	85.227	ENSUMAG00000000505	MSI2	100	93.782	Ursus_maritimus
ENSLBEG00000007061	msi2a	75	96.000	ENSVPAG00000006837	-	62	81.868	Vicugna_pacos
ENSLBEG00000007061	msi2a	93	93.127	ENSVVUG00000011783	MSI2	98	92.411	Vulpes_vulpes
ENSLBEG00000007061	msi2a	96	98.413	ENSXCOG00000006113	msi2a	100	93.612	Xiphophorus_couchianus
ENSLBEG00000007061	msi2a	100	99.509	ENSXMAG00000000608	msi2a	100	99.509	Xiphophorus_maculatus