EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000007066 (Gene tree)
Gene ID: 109981003
Gene Symbol: -
Alias: -
Full Name: cat eye syndrome critical region protein 5-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 10497 bases
Position: chrFKLU01000027.1:633267-643763
Accession: 109980899
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000009185	zf-CCHC	PF00098.23	7.1e-39	1	6
ENSLBEP00000009185	zf-CCHC	PF00098.23	7.1e-39	2	6
ENSLBEP00000009185	zf-CCHC	PF00098.23	7.1e-39	3	6
ENSLBEP00000009185	zf-CCHC	PF00098.23	7.1e-39	4	6
ENSLBEP00000009185	zf-CCHC	PF00098.23	7.1e-39	5	6
ENSLBEP00000009185	zf-CCHC	PF00098.23	7.1e-39	6	6

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000009685	-	2395	XM_020629610	ENSLBEP00000009185	167 (aa)	XP_020485266	UPI0009B43FA3
ENSLBET00000009653	-	5922	XM_020629446	ENSLBEP00000009158	441 (aa)	XP_020485102	UPI0009B4AB32
ENSLBET00000009672	-	1221	-	ENSLBEP00000009173	406 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000007066's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000007066's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000007066	-	61	31.776	ENSLBEG00000003575	-	62	31.633

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000007066	-	98	82.317	ENSPMGG00000017048	-	99	82.317	Periophthalmus_magnuspinnatus