EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000007106 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 6383 bases
Position: chrFKLU01000136.1:11373-17755
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000009187	zf-C2H2	PF00096.26	9e-33	1	5
ENSLBEP00000009187	zf-C2H2	PF00096.26	9e-33	2	5
ENSLBEP00000009187	zf-C2H2	PF00096.26	9e-33	3	5
ENSLBEP00000009187	zf-C2H2	PF00096.26	9e-33	4	5
ENSLBEP00000009187	zf-C2H2	PF00096.26	9e-33	5	5
ENSLBEP00000009187	zf-met	PF12874.7	3.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000009687	-	861	-	ENSLBEP00000009187	286 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000007106's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000007106's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000007106	-	65	41.259	ENSLBEG00000006161	-	82	40.606
ENSLBEG00000007106	-	85	51.596	ENSLBEG00000013570	-	99	52.047
ENSLBEG00000007106	-	91	45.652	ENSLBEG00000005307	znf236	62	45.652
ENSLBEG00000007106	-	57	40.000	ENSLBEG00000010132	-	58	40.000
ENSLBEG00000007106	-	62	52.632	ENSLBEG00000002278	-	70	43.443
ENSLBEG00000007106	-	75	43.651	ENSLBEG00000007937	-	90	43.651
ENSLBEG00000007106	-	62	44.231	ENSLBEG00000011588	-	58	44.231
ENSLBEG00000007106	-	75	44.444	ENSLBEG00000025696	-	68	44.444
ENSLBEG00000007106	-	75	36.500	ENSLBEG00000028271	-	85	36.500
ENSLBEG00000007106	-	84	39.412	ENSLBEG00000011210	-	59	39.412
ENSLBEG00000007106	-	73	45.918	ENSLBEG00000011313	-	70	45.918
ENSLBEG00000007106	-	64	41.606	ENSLBEG00000008439	znf319b	82	41.606
ENSLBEG00000007106	-	97	34.014	ENSLBEG00000017726	-	94	34.014
ENSLBEG00000007106	-	83	33.984	ENSLBEG00000024536	-	97	33.984
ENSLBEG00000007106	-	65	41.111	ENSLBEG00000011986	-	89	41.111
ENSLBEG00000007106	-	76	46.067	ENSLBEG00000010165	-	89	47.436
ENSLBEG00000007106	-	67	46.429	ENSLBEG00000011006	-	50	46.429
ENSLBEG00000007106	-	74	37.931	ENSLBEG00000012438	ZNF319	91	43.373
ENSLBEG00000007106	-	78	40.667	ENSLBEG00000022736	prdm5	71	40.667
ENSLBEG00000007106	-	77	33.544	ENSLBEG00000014676	-	62	33.544
ENSLBEG00000007106	-	59	34.545	ENSLBEG00000027993	-	70	31.282
ENSLBEG00000007106	-	80	44.162	ENSLBEG00000024509	-	99	45.304
ENSLBEG00000007106	-	79	48.684	ENSLBEG00000004892	-	94	48.684
ENSLBEG00000007106	-	87	51.634	ENSLBEG00000008606	-	98	53.333
ENSLBEG00000007106	-	81	40.909	ENSLBEG00000016562	znf646	65	40.909
ENSLBEG00000007106	-	85	45.161	ENSLBEG00000009567	-	71	45.161
ENSLBEG00000007106	-	62	35.211	ENSLBEG00000006963	-	55	35.211
ENSLBEG00000007106	-	66	37.805	ENSLBEG00000005729	znf652	89	35.503
ENSLBEG00000007106	-	79	45.810	ENSLBEG00000012201	-	67	45.810
ENSLBEG00000007106	-	65	46.667	ENSLBEG00000004867	-	65	46.667
ENSLBEG00000007106	-	63	44.961	ENSLBEG00000015264	-	96	44.961
ENSLBEG00000007106	-	66	58.182	ENSLBEG00000001715	-	71	58.182
ENSLBEG00000007106	-	66	45.455	ENSLBEG00000001756	-	85	42.197
ENSLBEG00000007106	-	63	45.161	ENSLBEG00000008909	-	75	45.161
ENSLBEG00000007106	-	79	43.162	ENSLBEG00000014211	-	82	46.354
ENSLBEG00000007106	-	74	44.928	ENSLBEG00000011145	si:cabz01071911.3	83	44.928
ENSLBEG00000007106	-	72	48.718	ENSLBEG00000009580	-	84	48.718
ENSLBEG00000007106	-	69	34.759	ENSLBEG00000024454	-	61	34.759
ENSLBEG00000007106	-	64	40.179	ENSLBEG00000024458	-	72	40.179
ENSLBEG00000007106	-	77	38.158	ENSLBEG00000005715	-	79	38.158
ENSLBEG00000007106	-	82	42.623	ENSLBEG00000026457	-	99	44.444
ENSLBEG00000007106	-	65	46.471	ENSLBEG00000017450	-	80	46.471
ENSLBEG00000007106	-	86	41.011	ENSLBEG00000025689	-	76	41.011
ENSLBEG00000007106	-	76	47.619	ENSLBEG00000000435	-	78	47.619
ENSLBEG00000007106	-	70	46.465	ENSLBEG00000007837	-	84	47.291
ENSLBEG00000007106	-	65	47.977	ENSLBEG00000000373	-	71	47.977
ENSLBEG00000007106	-	70	40.141	ENSLBEG00000001920	-	86	41.818
ENSLBEG00000007106	-	66	47.297	ENSLBEG00000014263	-	51	47.297
ENSLBEG00000007106	-	64	44.865	ENSLBEG00000008850	-	51	44.865
ENSLBEG00000007106	-	58	32.624	ENSLBEG00000002594	-	57	37.736
ENSLBEG00000007106	-	89	40.780	ENSLBEG00000011289	-	75	40.780
ENSLBEG00000007106	-	66	49.123	ENSLBEG00000025139	-	63	49.123
ENSLBEG00000007106	-	73	41.237	ENSLBEG00000021260	-	86	41.237
ENSLBEG00000007106	-	69	47.973	ENSLBEG00000004833	-	58	47.973
ENSLBEG00000007106	-	81	48.276	ENSLBEG00000024737	-	99	48.276
ENSLBEG00000007106	-	77	42.925	ENSLBEG00000011091	si:cabz01071911.3	94	42.925
ENSLBEG00000007106	-	62	38.849	ENSLBEG00000020297	gfi1b	54	38.849
ENSLBEG00000007106	-	77	35.075	ENSLBEG00000000972	snai2	65	35.075
ENSLBEG00000007106	-	67	44.615	ENSLBEG00000011465	-	77	44.615
ENSLBEG00000007106	-	62	60.000	ENSLBEG00000012947	-	84	60.000
ENSLBEG00000007106	-	72	38.378	ENSLBEG00000017424	-	89	38.378
ENSLBEG00000007106	-	95	36.571	ENSLBEG00000018509	-	88	36.571
ENSLBEG00000007106	-	69	33.133	ENSLBEG00000013197	PRDM15	50	33.133
ENSLBEG00000007106	-	69	41.781	ENSLBEG00000001132	-	77	41.781
ENSLBEG00000007106	-	62	43.119	ENSLBEG00000022059	-	76	43.119
ENSLBEG00000007106	-	62	40.936	ENSLBEG00000028628	znf1174	50	40.936
ENSLBEG00000007106	-	67	40.206	ENSLBEG00000028243	-	81	40.206
ENSLBEG00000007106	-	66	48.649	ENSLBEG00000018970	-	78	48.649
ENSLBEG00000007106	-	84	42.623	ENSLBEG00000015694	-	93	41.281
ENSLBEG00000007106	-	88	50.000	ENSLBEG00000002357	-	98	50.000
ENSLBEG00000007106	-	69	46.364	ENSLBEG00000020128	-	94	45.968
ENSLBEG00000007106	-	65	48.214	ENSLBEG00000006924	-	99	48.214
ENSLBEG00000007106	-	84	46.429	ENSLBEG00000010278	-	94	47.368
ENSLBEG00000007106	-	82	55.714	ENSLBEG00000008115	-	97	46.983
ENSLBEG00000007106	-	60	47.399	ENSLBEG00000000343	-	56	47.399
ENSLBEG00000007106	-	71	46.821	ENSLBEG00000011349	-	66	46.821
ENSLBEG00000007106	-	64	40.462	ENSLBEG00000020747	-	87	40.462
ENSLBEG00000007106	-	82	43.077	ENSLBEG00000000369	-	97	43.077
ENSLBEG00000007106	-	69	41.379	ENSLBEG00000008320	-	80	33.333
ENSLBEG00000007106	-	65	38.286	ENSLBEG00000012151	zbtb48	53	38.286
ENSLBEG00000007106	-	72	42.609	ENSLBEG00000014282	-	71	42.609
ENSLBEG00000007106	-	61	46.821	ENSLBEG00000000393	-	56	46.821
ENSLBEG00000007106	-	83	45.562	ENSLBEG00000011028	-	77	45.562
ENSLBEG00000007106	-	79	47.977	ENSLBEG00000004805	-	89	47.977
ENSLBEG00000007106	-	79	44.271	ENSLBEG00000007251	-	85	44.271
ENSLBEG00000007106	-	82	45.038	ENSLBEG00000008689	-	89	40.244
ENSLBEG00000007106	-	60	34.532	ENSLBEG00000026573	-	57	34.532
ENSLBEG00000007106	-	65	37.342	ENSLBEG00000025305	-	82	37.342
ENSLBEG00000007106	-	64	39.548	ENSLBEG00000013235	-	78	39.548

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000007106	-	76	41.739	ENSAPOG00000019138	-	67	41.739	Acanthochromis_polyacanthus
ENSLBEG00000007106	-	57	32.903	ENSAPOG00000012437	-	78	32.903	Acanthochromis_polyacanthus
ENSLBEG00000007106	-	65	37.383	ENSACIG00000002944	-	82	37.383	Amphilophus_citrinellus
ENSLBEG00000007106	-	60	40.491	ENSACIG00000017892	-	70	40.491	Amphilophus_citrinellus
ENSLBEG00000007106	-	60	46.154	ENSACIG00000004641	-	52	46.154	Amphilophus_citrinellus
ENSLBEG00000007106	-	82	39.496	ENSAOCG00000014769	-	59	39.496	Amphiprion_ocellaris
ENSLBEG00000007106	-	82	41.071	ENSAOCG00000015944	-	54	41.071	Amphiprion_ocellaris
ENSLBEG00000007106	-	67	37.126	ENSAOCG00000001325	-	73	37.126	Amphiprion_ocellaris
ENSLBEG00000007106	-	62	34.940	ENSAOCG00000006744	-	90	30.968	Amphiprion_ocellaris
ENSLBEG00000007106	-	76	48.214	ENSAOCG00000016897	-	74	48.214	Amphiprion_ocellaris
ENSLBEG00000007106	-	74	34.078	ENSAPEG00000010013	-	54	35.079	Amphiprion_percula
ENSLBEG00000007106	-	76	48.214	ENSAPEG00000001556	-	74	42.647	Amphiprion_percula
ENSLBEG00000007106	-	67	33.557	ENSAPEG00000015714	-	66	33.557	Amphiprion_percula
ENSLBEG00000007106	-	77	41.353	ENSATEG00000018931	-	88	35.802	Anabas_testudineus
ENSLBEG00000007106	-	53	46.377	ENSACLG00000011658	-	79	47.368	Astatotilapia_calliptera
ENSLBEG00000007106	-	61	46.269	ENSACLG00000019154	-	76	46.269	Astatotilapia_calliptera
ENSLBEG00000007106	-	59	37.989	ENSAMXG00000029518	-	61	37.705	Astyanax_mexicanus
ENSLBEG00000007106	-	71	36.735	ENSCING00000002128	zf(c2h2)-35	62	36.735	Ciona_intestinalis
ENSLBEG00000007106	-	62	51.250	ENSCSEG00000015593	-	73	51.250	Cynoglossus_semilaevis
ENSLBEG00000007106	-	61	40.805	ENSCSEG00000010453	-	58	40.805	Cynoglossus_semilaevis
ENSLBEG00000007106	-	57	41.121	ENSCSEG00000010264	-	89	41.121	Cynoglossus_semilaevis
ENSLBEG00000007106	-	74	44.706	ENSCSEG00000008528	-	54	44.706	Cynoglossus_semilaevis
ENSLBEG00000007106	-	60	48.000	ENSCVAG00000012682	-	59	48.000	Cyprinodon_variegatus
ENSLBEG00000007106	-	67	43.000	ENSCVAG00000003250	-	72	43.000	Cyprinodon_variegatus
ENSLBEG00000007106	-	67	48.921	ENSCVAG00000015616	-	75	48.921	Cyprinodon_variegatus
ENSLBEG00000007106	-	62	45.029	ENSCVAG00000006653	-	59	45.029	Cyprinodon_variegatus
ENSLBEG00000007106	-	65	43.902	ENSCVAG00000020141	-	63	43.902	Cyprinodon_variegatus
ENSLBEG00000007106	-	73	39.429	ENSEBUG00000007931	-	62	39.429	Eptatretus_burgeri
ENSLBEG00000007106	-	72	45.794	ENSELUG00000024007	-	67	45.794	Esox_lucius
ENSLBEG00000007106	-	60	43.590	ENSELUG00000012088	-	52	43.590	Esox_lucius
ENSLBEG00000007106	-	66	42.500	ENSELUG00000001909	-	85	32.663	Esox_lucius
ENSLBEG00000007106	-	64	45.161	ENSFHEG00000023184	-	53	45.161	Fundulus_heteroclitus
ENSLBEG00000007106	-	59	43.066	ENSGAFG00000001879	-	59	43.066	Gambusia_affinis
ENSLBEG00000007106	-	83	46.032	ENSGAFG00000008204	-	69	46.032	Gambusia_affinis
ENSLBEG00000007106	-	70	36.747	ENSHBUG00000006656	-	56	36.747	Haplochromis_burtoni
ENSLBEG00000007106	-	77	44.928	ENSHCOG00000020670	-	95	44.928	Hippocampus_comes
ENSLBEG00000007106	-	79	41.860	ENSHCOG00000015497	-	88	41.860	Hippocampus_comes
ENSLBEG00000007106	-	65	45.361	ENSHCOG00000013489	-	83	45.361	Hippocampus_comes
ENSLBEG00000007106	-	52	34.320	ENSIPUG00000024004	-	74	34.320	Ictalurus_punctatus
ENSLBEG00000007106	-	60	33.333	ENSKMAG00000014184	-	57	33.333	Kryptolebias_marmoratus
ENSLBEG00000007106	-	82	34.731	ENSKMAG00000007699	-	76	34.731	Kryptolebias_marmoratus
ENSLBEG00000007106	-	79	43.529	ENSLOCG00000004208	-	99	43.529	Lepisosteus_oculatus
ENSLBEG00000007106	-	88	41.818	ENSMAMG00000017939	-	85	41.818	Mastacembelus_armatus
ENSLBEG00000007106	-	83	32.841	ENSMZEG00005013907	-	80	32.841	Maylandia_zebra
ENSLBEG00000007106	-	52	35.484	ENSMMOG00000013330	-	78	38.889	Mola_mola
ENSLBEG00000007106	-	67	43.590	ENSMALG00000004279	-	85	43.590	Monopterus_albus
ENSLBEG00000007106	-	80	38.095	ENSONIG00000007967	-	54	38.095	Oreochromis_niloticus
ENSLBEG00000007106	-	66	34.503	ENSONIG00000005050	-	90	38.415	Oreochromis_niloticus
ENSLBEG00000007106	-	67	50.000	ENSORLG00000021885	-	64	50.000	Oryzias_latipes
ENSLBEG00000007106	-	92	40.116	ENSORLG00000002268	-	92	40.116	Oryzias_latipes
ENSLBEG00000007106	-	65	30.178	ENSORLG00000028711	-	88	30.178	Oryzias_latipes
ENSLBEG00000007106	-	77	42.105	ENSORLG00020018921	-	87	42.105	Oryzias_latipes_hni
ENSLBEG00000007106	-	68	50.000	ENSORLG00020019227	-	51	42.748	Oryzias_latipes_hni
ENSLBEG00000007106	-	65	47.183	ENSORLG00015018099	-	66	47.183	Oryzias_latipes_hsok
ENSLBEG00000007106	-	70	40.299	ENSOMEG00000005578	-	71	40.299	Oryzias_melastigma
ENSLBEG00000007106	-	73	36.634	ENSPMGG00000002455	-	93	40.876	Periophthalmus_magnuspinnatus
ENSLBEG00000007106	-	64	43.333	ENSPMGG00000002659	-	74	43.333	Periophthalmus_magnuspinnatus
ENSLBEG00000007106	-	74	46.324	ENSPMGG00000002661	-	69	46.324	Periophthalmus_magnuspinnatus
ENSLBEG00000007106	-	71	47.619	ENSPMGG00000007051	-	57	44.037	Periophthalmus_magnuspinnatus
ENSLBEG00000007106	-	67	46.154	ENSPMGG00000019750	-	78	46.154	Periophthalmus_magnuspinnatus
ENSLBEG00000007106	-	79	39.344	ENSPMGG00000006928	-	51	39.344	Periophthalmus_magnuspinnatus
ENSLBEG00000007106	-	69	44.286	ENSPMGG00000009571	-	73	44.286	Periophthalmus_magnuspinnatus
ENSLBEG00000007106	-	63	34.426	ENSPMAG00000002022	-	100	34.426	Petromyzon_marinus
ENSLBEG00000007106	-	64	35.616	ENSPMAG00000004189	-	98	35.616	Petromyzon_marinus
ENSLBEG00000007106	-	71	40.909	ENSPMAG00000000839	-	92	40.909	Petromyzon_marinus
ENSLBEG00000007106	-	74	43.575	ENSPFOG00000018860	-	100	43.575	Poecilia_formosa
ENSLBEG00000007106	-	65	46.471	ENSPFOG00000009491	-	51	46.471	Poecilia_formosa
ENSLBEG00000007106	-	82	40.217	ENSPLAG00000010067	-	74	40.217	Poecilia_latipinna
ENSLBEG00000007106	-	62	43.220	ENSPLAG00000014832	-	74	43.220	Poecilia_latipinna
ENSLBEG00000007106	-	67	42.500	ENSPLAG00000008941	-	81	42.500	Poecilia_latipinna
ENSLBEG00000007106	-	68	36.813	ENSPMEG00000002953	-	61	36.813	Poecilia_mexicana
ENSLBEG00000007106	-	73	43.529	ENSPMEG00000024117	-	51	46.471	Poecilia_mexicana
ENSLBEG00000007106	-	62	43.220	ENSPMEG00000005210	-	74	43.220	Poecilia_mexicana
ENSLBEG00000007106	-	65	43.860	ENSPREG00000009488	-	90	43.860	Poecilia_reticulata
ENSLBEG00000007106	-	66	46.591	ENSPREG00000002603	-	63	46.591	Poecilia_reticulata
ENSLBEG00000007106	-	59	42.241	ENSPNYG00000017888	-	50	37.975	Pundamilia_nyererei
ENSLBEG00000007106	-	72	35.260	ENSPNAG00000005946	-	86	38.150	Pygocentrus_nattereri
ENSLBEG00000007106	-	62	40.566	ENSSFOG00015011531	-	81	38.372	Scleropages_formosus
ENSLBEG00000007106	-	75	40.223	ENSSMAG00000013291	-	89	45.395	Scophthalmus_maximus
ENSLBEG00000007106	-	80	44.545	ENSSDUG00000020774	-	59	45.714	Seriola_dumerili
ENSLBEG00000007106	-	63	38.312	ENSSLDG00000014436	-	72	38.217	Seriola_lalandi_dorsalis
ENSLBEG00000007106	-	64	42.342	ENSSLDG00000011849	-	53	42.342	Seriola_lalandi_dorsalis
ENSLBEG00000007106	-	74	39.316	ENSSPAG00000011544	-	56	40.000	Stegastes_partitus
ENSLBEG00000007106	-	67	37.778	ENSSPAG00000011533	-	83	37.778	Stegastes_partitus
ENSLBEG00000007106	-	72	41.060	ENSXETG00000012506	znf91	99	40.764	Xenopus_tropicalis
ENSLBEG00000007106	-	67	45.556	ENSXCOG00000000254	-	65	45.556	Xiphophorus_couchianus
ENSLBEG00000007106	-	71	38.164	ENSXCOG00000003441	-	57	38.164	Xiphophorus_couchianus
ENSLBEG00000007106	-	66	41.538	ENSXCOG00000020768	-	68	41.538	Xiphophorus_couchianus
ENSLBEG00000007106	-	75	39.884	ENSXMAG00000012936	-	76	39.884	Xiphophorus_maculatus