EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000007356 (Gene tree)
Gene ID: 109987166
Gene Symbol: srsf6a
Alias: fa12h12|sfrs6a|wu:fa12h12|wu:fa13e06|zgc:63770
Full Name: serine/arginine-rich splicing factor 6-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 3803 bases
Position: chrFKLU01000111.1:525781-529583
Accession: 109987166
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000009503	RRM_1	PF00076.22	1e-31	1	2
ENSLBEP00000009503	RRM_1	PF00076.22	1e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000010024	-	1080	XM_020638172	ENSLBEP00000009503	359 (aa)	XP_020493828	-

Gene Model

Click here to download ENSLBEG00000007356's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000007356's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000007356	srsf6a	62	41.048	ENSLBEG00000020864	-	86	41.315
ENSLBEG00000007356	srsf6a	50	60.773	ENSLBEG00000013647	srsf5b	61	52.941
ENSLBEG00000007356	srsf6a	50	61.780	ENSLBEG00000017153	srsf5a	72	60.938

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000007356	srsf6a	52	85.484	ENSG00000124193	SRSF6	58	92.308	Homo_sapiens
ENSLBEG00000007356	srsf6a	52	68.449	ENSAMEG00000003710	SRSF6	53	69.189	Ailuropoda_melanoleuca
ENSLBEG00000007356	srsf6a	70	74.000	ENSACIG00000020091	-	95	81.395	Amphilophus_citrinellus
ENSLBEG00000007356	srsf6a	84	79.630	ENSACIG00000023658	-	88	90.110	Amphilophus_citrinellus
ENSLBEG00000007356	srsf6a	51	85.870	ENSAOCG00000004309	-	56	85.870	Amphiprion_ocellaris
ENSLBEG00000007356	srsf6a	95	71.554	ENSAPEG00000013086	-	89	63.182	Amphiprion_percula
ENSLBEG00000007356	srsf6a	53	80.612	ENSAPEG00000020746	-	65	80.978	Amphiprion_percula
ENSLBEG00000007356	srsf6a	52	84.324	ENSATEG00000007255	-	71	80.541	Anabas_testudineus
ENSLBEG00000007356	srsf6a	51	85.870	ENSACAG00000002061	SRSF6	52	85.870	Anolis_carolinensis
ENSLBEG00000007356	srsf6a	52	85.484	ENSANAG00000024080	SRSF6	58	92.308	Aotus_nancymaae
ENSLBEG00000007356	srsf6a	51	84.865	ENSAMXG00000042692	-	96	85.926	Astyanax_mexicanus
ENSLBEG00000007356	srsf6a	52	87.166	ENSAMXG00000003101	-	89	70.238	Astyanax_mexicanus
ENSLBEG00000007356	srsf6a	52	85.484	ENSBTAG00000008527	SRSF6	58	93.590	Bos_taurus
ENSLBEG00000007356	srsf6a	52	85.484	ENSCJAG00000048403	SRSF6	67	84.783	Callithrix_jacchus
ENSLBEG00000007356	srsf6a	52	85.484	ENSCAFG00000009289	SRSF6	58	93.590	Canis_familiaris
ENSLBEG00000007356	srsf6a	52	85.484	ENSCAFG00020013559	SRSF6	58	93.590	Canis_lupus_dingo
ENSLBEG00000007356	srsf6a	52	85.484	ENSCHIG00000015890	-	58	93.590	Capra_hircus
ENSLBEG00000007356	srsf6a	52	84.409	ENSCHIG00000009148	-	53	83.696	Capra_hircus
ENSLBEG00000007356	srsf6a	52	85.484	ENSCCAG00000026018	-	58	92.308	Cebus_capucinus
ENSLBEG00000007356	srsf6a	52	74.866	ENSCCAG00000018540	-	60	74.595	Cebus_capucinus
ENSLBEG00000007356	srsf6a	52	85.484	ENSCATG00000030794	SRSF6	58	92.308	Cercocebus_atys
ENSLBEG00000007356	srsf6a	52	85.484	ENSCLAG00000010247	SRSF6	58	92.308	Chinchilla_lanigera
ENSLBEG00000007356	srsf6a	52	85.484	ENSCSAG00000014022	SRSF6	53	84.783	Chlorocebus_sabaeus
ENSLBEG00000007356	srsf6a	52	86.096	ENSCPBG00000018200	SRSF6	53	87.568	Chrysemys_picta_bellii
ENSLBEG00000007356	srsf6a	52	84.409	ENSCANG00000037774	-	53	83.696	Colobus_angolensis_palliatus
ENSLBEG00000007356	srsf6a	52	85.484	ENSCGRG00001022339	Srsf6	58	92.308	Cricetulus_griseus_chok1gshd
ENSLBEG00000007356	srsf6a	51	86.022	ENSDARG00000016783	srsf6b	82	94.872	Danio_rerio
ENSLBEG00000007356	srsf6a	52	85.484	ENSDNOG00000008410	SRSF6	53	84.783	Dasypus_novemcinctus
ENSLBEG00000007356	srsf6a	52	85.484	ENSDORG00000028378	Srsf6	58	92.308	Dipodomys_ordii
ENSLBEG00000007356	srsf6a	52	81.720	ENSETEG00000006221	SRSF6	52	81.522	Echinops_telfairi
ENSLBEG00000007356	srsf6a	52	85.484	ENSEASG00005023429	SRSF6	53	84.783	Equus_asinus_asinus
ENSLBEG00000007356	srsf6a	52	85.484	ENSECAG00000023932	SRSF6	56	84.783	Equus_caballus
ENSLBEG00000007356	srsf6a	51	87.568	ENSELUG00000024182	SRSF6	90	88.618	Esox_lucius
ENSLBEG00000007356	srsf6a	50	87.293	ENSELUG00000013506	SRSF6	93	83.429	Esox_lucius
ENSLBEG00000007356	srsf6a	52	85.484	ENSFCAG00000032814	SRSF6	53	84.783	Felis_catus
ENSLBEG00000007356	srsf6a	95	70.349	ENSFHEG00000023065	srsf6a	54	89.674	Fundulus_heteroclitus
ENSLBEG00000007356	srsf6a	50	85.635	ENSGMOG00000014458	srsf6a	92	68.421	Gadus_morhua
ENSLBEG00000007356	srsf6a	50	75.138	ENSGMOG00000006105	srsf6a	62	73.481	Gadus_morhua
ENSLBEG00000007356	srsf6a	51	87.097	ENSGALG00000000990	SRSF6	58	94.872	Gallus_gallus
ENSLBEG00000007356	srsf6a	95	72.805	ENSGACG00000006084	srsf6a	93	70.554	Gasterosteus_aculeatus
ENSLBEG00000007356	srsf6a	52	86.096	ENSGAGG00000003238	SRSF6	53	87.568	Gopherus_agassizii
ENSLBEG00000007356	srsf6a	52	85.484	ENSGGOG00000009808	SRSF6	58	92.308	Gorilla_gorilla
ENSLBEG00000007356	srsf6a	74	67.424	ENSHBUG00000006386	-	57	85.870	Haplochromis_burtoni
ENSLBEG00000007356	srsf6a	52	85.484	ENSHGLG00000007348	SRSF6	58	92.308	Heterocephalus_glaber_female
ENSLBEG00000007356	srsf6a	54	67.347	ENSHGLG00000007701	-	56	65.217	Heterocephalus_glaber_female
ENSLBEG00000007356	srsf6a	93	61.862	ENSHCOG00000002740	srsf6a	57	86.957	Hippocampus_comes
ENSLBEG00000007356	srsf6a	50	80.447	ENSIPUG00000016856	SRSF6	88	66.771	Ictalurus_punctatus
ENSLBEG00000007356	srsf6a	51	84.324	ENSIPUG00000004776	-	63	85.946	Ictalurus_punctatus
ENSLBEG00000007356	srsf6a	52	85.484	ENSSTOG00000010866	SRSF6	58	92.308	Ictidomys_tridecemlineatus
ENSLBEG00000007356	srsf6a	95	66.276	ENSKMAG00000011934	srsf6a	58	86.413	Kryptolebias_marmoratus
ENSLBEG00000007356	srsf6a	92	67.560	ENSLACG00000005466	SRSF6	54	85.326	Latimeria_chalumnae
ENSLBEG00000007356	srsf6a	52	85.484	ENSMFAG00000036925	SRSF6	58	92.308	Macaca_fascicularis
ENSLBEG00000007356	srsf6a	52	85.484	ENSMMUG00000006742	SRSF6	58	92.308	Macaca_mulatta
ENSLBEG00000007356	srsf6a	52	84.946	ENSMNEG00000038270	-	53	84.239	Macaca_nemestrina
ENSLBEG00000007356	srsf6a	52	84.946	ENSMNEG00000027392	-	58	91.026	Macaca_nemestrina
ENSLBEG00000007356	srsf6a	51	94.565	ENSMAMG00000017161	srsf6a	92	77.313	Mastacembelus_armatus
ENSLBEG00000007356	srsf6a	51	84.153	ENSMZEG00005020658	-	60	84.153	Maylandia_zebra
ENSLBEG00000007356	srsf6a	69	75.000	ENSMZEG00005008032	-	56	85.870	Maylandia_zebra
ENSLBEG00000007356	srsf6a	52	84.946	ENSMICG00000008537	SRSF6	58	92.308	Microcebus_murinus
ENSLBEG00000007356	srsf6a	52	86.022	ENSMODG00000003107	SRSF6	54	86.413	Monodelphis_domestica
ENSLBEG00000007356	srsf6a	69	82.143	ENSMALG00000003702	srsf6a	63	79.891	Monopterus_albus
ENSLBEG00000007356	srsf6a	52	85.484	MGP_CAROLIEiJ_G0024606	Srsf6	58	92.308	Mus_caroli
ENSLBEG00000007356	srsf6a	52	85.484	ENSMUSG00000016921	Srsf6	58	92.308	Mus_musculus
ENSLBEG00000007356	srsf6a	52	85.484	MGP_PahariEiJ_G0026050	Srsf6	58	92.308	Mus_pahari
ENSLBEG00000007356	srsf6a	52	85.484	MGP_SPRETEiJ_G0025528	Srsf6	58	92.308	Mus_spretus
ENSLBEG00000007356	srsf6a	52	85.484	ENSMPUG00000017692	SRSF6	63	84.783	Mustela_putorius_furo
ENSLBEG00000007356	srsf6a	52	58.216	ENSMLUG00000016618	SRSF6	53	56.604	Myotis_lucifugus
ENSLBEG00000007356	srsf6a	52	85.484	ENSNGAG00000017560	Srsf6	58	92.308	Nannospalax_galili
ENSLBEG00000007356	srsf6a	69	66.667	ENSNBRG00000014709	-	57	85.870	Neolamprologus_brichardi
ENSLBEG00000007356	srsf6a	52	85.484	ENSNLEG00000006524	SRSF6	58	92.308	Nomascus_leucogenys
ENSLBEG00000007356	srsf6a	68	72.541	ENSMEUG00000014615	SRSF6	60	86.413	Notamacropus_eugenii
ENSLBEG00000007356	srsf6a	51	83.152	ENSONIG00000020247	-	96	65.487	Oreochromis_niloticus
ENSLBEG00000007356	srsf6a	95	74.854	ENSONIG00000001925	-	81	94.022	Oreochromis_niloticus
ENSLBEG00000007356	srsf6a	52	64.322	ENSOCUG00000009785	-	62	67.016	Oryctolagus_cuniculus
ENSLBEG00000007356	srsf6a	51	52.198	ENSOCUG00000023999	-	70	48.913	Oryctolagus_cuniculus
ENSLBEG00000007356	srsf6a	100	69.916	ENSORLG00000003530	srsf6a	93	68.657	Oryzias_latipes
ENSLBEG00000007356	srsf6a	100	69.638	ENSORLG00015009410	srsf6a	90	71.429	Oryzias_latipes_hsok
ENSLBEG00000007356	srsf6a	52	74.194	ENSOMEG00000006001	srsf6a	92	63.429	Oryzias_melastigma
ENSLBEG00000007356	srsf6a	52	84.946	ENSOGAG00000014468	SRSF6	53	84.239	Otolemur_garnettii
ENSLBEG00000007356	srsf6a	52	82.258	ENSOARG00000003117	SRSF6	52	82.609	Ovis_aries
ENSLBEG00000007356	srsf6a	52	84.946	ENSPPAG00000034327	-	53	84.239	Pan_paniscus
ENSLBEG00000007356	srsf6a	52	70.968	ENSPPAG00000043131	-	56	72.283	Pan_paniscus
ENSLBEG00000007356	srsf6a	52	85.484	ENSPPRG00000008917	SRSF6	53	84.783	Panthera_pardus
ENSLBEG00000007356	srsf6a	52	70.968	ENSPTRG00000046274	-	56	72.283	Pan_troglodytes
ENSLBEG00000007356	srsf6a	52	85.484	ENSPTRG00000044686	-	58	92.308	Pan_troglodytes
ENSLBEG00000007356	srsf6a	52	85.484	ENSPANG00000035224	SRSF6	58	92.308	Papio_anubis
ENSLBEG00000007356	srsf6a	50	72.678	ENSPKIG00000015703	-	95	61.589	Paramormyrops_kingsleyae
ENSLBEG00000007356	srsf6a	94	79.060	ENSPKIG00000018463	-	77	96.154	Paramormyrops_kingsleyae
ENSLBEG00000007356	srsf6a	52	86.022	ENSPCIG00000003820	SRSF6	58	94.872	Phascolarctos_cinereus
ENSLBEG00000007356	srsf6a	51	92.982	ENSPFOG00000006437	srsf6a	92	70.621	Poecilia_formosa
ENSLBEG00000007356	srsf6a	95	70.725	ENSPLAG00000009243	srsf6a	79	90.476	Poecilia_latipinna
ENSLBEG00000007356	srsf6a	51	94.022	ENSPMEG00000006042	SRSF6	53	93.478	Poecilia_mexicana
ENSLBEG00000007356	srsf6a	52	85.484	ENSPPYG00000011019	SRSF6	53	84.783	Pongo_abelii
ENSLBEG00000007356	srsf6a	52	84.946	ENSPCAG00000010954	SRSF6	55	84.239	Procavia_capensis
ENSLBEG00000007356	srsf6a	52	84.946	ENSPCOG00000026364	SRSF6	58	92.308	Propithecus_coquereli
ENSLBEG00000007356	srsf6a	52	86.559	ENSPVAG00000015232	SRSF6	53	85.405	Pteropus_vampyrus
ENSLBEG00000007356	srsf6a	72	67.704	ENSPNYG00000004944	-	57	85.870	Pundamilia_nyererei
ENSLBEG00000007356	srsf6a	52	85.484	ENSRNOG00000006380	Srsf6	54	84.783	Rattus_norvegicus
ENSLBEG00000007356	srsf6a	52	84.946	ENSRBIG00000041414	SRSF6	60	92.308	Rhinopithecus_bieti
ENSLBEG00000007356	srsf6a	52	85.484	ENSRROG00000029989	SRSF6	58	92.308	Rhinopithecus_roxellana
ENSLBEG00000007356	srsf6a	51	69.945	ENSSBOG00000034078	-	54	67.760	Saimiri_boliviensis_boliviensis
ENSLBEG00000007356	srsf6a	52	85.484	ENSSBOG00000033708	-	58	92.308	Saimiri_boliviensis_boliviensis
ENSLBEG00000007356	srsf6a	52	86.022	ENSSHAG00000012805	SRSF6	54	86.413	Sarcophilus_harrisii
ENSLBEG00000007356	srsf6a	51	88.525	ENSSFOG00015015169	SRSF6	59	88.587	Scleropages_formosus
ENSLBEG00000007356	srsf6a	94	72.046	ENSSFOG00015019681	-	91	71.221	Scleropages_formosus
ENSLBEG00000007356	srsf6a	51	82.609	ENSSMAG00000017447	-	55	81.622	Scophthalmus_maximus
ENSLBEG00000007356	srsf6a	95	77.126	ENSSDUG00000016097	srsf6a	92	80.896	Seriola_dumerili
ENSLBEG00000007356	srsf6a	51	94.565	ENSSLDG00000022841	srsf6a	93	82.090	Seriola_lalandi_dorsalis
ENSLBEG00000007356	srsf6a	51	86.957	ENSSPUG00000004967	SRSF6	58	94.872	Sphenodon_punctatus
ENSLBEG00000007356	srsf6a	82	83.333	ENSSPAG00000002362	srsf6a	83	90.374	Stegastes_partitus
ENSLBEG00000007356	srsf6a	67	72.199	ENSSSCG00000007362	SRSF6	60	84.783	Sus_scrofa
ENSLBEG00000007356	srsf6a	51	86.957	ENSTGUG00000003455	SRSF6	53	86.413	Taeniopygia_guttata
ENSLBEG00000007356	srsf6a	94	72.997	ENSTNIG00000001692	srsf6a	56	92.391	Tetraodon_nigroviridis
ENSLBEG00000007356	srsf6a	52	85.484	ENSUAMG00000003559	SRSF6	58	93.590	Ursus_americanus
ENSLBEG00000007356	srsf6a	51	90.217	ENSXMAG00000021849	srsf6a	54	91.304	Xiphophorus_maculatus