EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000007564 (Gene tree)
Gene ID: 109989489
Gene Symbol: slirp
Alias: sb:cb657|si:ch73-276n11.1
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 3424 bases
Position: chrFKLU01000161.1:106478-109901
Accession: 109989489
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000009776	RRM_1	PF00076.22	4.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000010303	-	1445	XM_020641267	ENSLBEP00000009776	100 (aa)	XP_020496923	UPI0009B48B35

Gene Model

Click here to download ENSLBEG00000007564's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000007564's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000007564	slirp	85	51.765	ENSG00000119705	SLIRP	92	55.714	Homo_sapiens
ENSLBEG00000007564	slirp	100	70.000	ENSAPOG00000001298	slirp	100	70.000	Acanthochromis_polyacanthus
ENSLBEG00000007564	slirp	70	54.286	ENSAMEG00000003975	SLIRP	77	54.286	Ailuropoda_melanoleuca
ENSLBEG00000007564	slirp	98	67.347	ENSACIG00000023083	slirp	97	67.347	Amphilophus_citrinellus
ENSLBEG00000007564	slirp	98	67.347	ENSAOCG00000006342	slirp	99	67.347	Amphiprion_ocellaris
ENSLBEG00000007564	slirp	98	67.347	ENSAPEG00000015917	slirp	99	67.347	Amphiprion_percula
ENSLBEG00000007564	slirp	97	67.010	ENSAPEG00000015719	-	99	67.010	Amphiprion_percula
ENSLBEG00000007564	slirp	100	66.000	ENSATEG00000013525	slirp	100	66.000	Anabas_testudineus
ENSLBEG00000007564	slirp	98	57.143	ENSAMXG00000018693	slirp	98	57.143	Astyanax_mexicanus
ENSLBEG00000007564	slirp	88	53.409	ENSCJAG00000016946	SLIRP	81	53.409	Callithrix_jacchus
ENSLBEG00000007564	slirp	89	50.562	ENSCAFG00020015876	-	80	50.562	Canis_lupus_dingo
ENSLBEG00000007564	slirp	88	52.273	ENSCCAG00000030130	SLIRP	81	52.273	Cebus_capucinus
ENSLBEG00000007564	slirp	76	57.895	ENSCATG00000036327	SLIRP	72	59.701	Cercocebus_atys
ENSLBEG00000007564	slirp	88	50.000	ENSCSAG00000011736	SLIRP	81	50.000	Chlorocebus_sabaeus
ENSLBEG00000007564	slirp	81	49.383	ENSCPBG00000026327	SLIRP	82	49.383	Chrysemys_picta_bellii
ENSLBEG00000007564	slirp	67	58.209	ENSCANG00000032892	SLIRP	68	58.209	Colobus_angolensis_palliatus
ENSLBEG00000007564	slirp	88	48.889	ENSCGRG00001024068	Slirp	81	48.889	Cricetulus_griseus_chok1gshd
ENSLBEG00000007564	slirp	88	48.889	ENSCGRG00000017440	Slirp	81	48.889	Cricetulus_griseus_crigri
ENSLBEG00000007564	slirp	84	53.571	ENSCSEG00000015766	slirp	86	53.571	Cynoglossus_semilaevis
ENSLBEG00000007564	slirp	80	70.000	ENSCVAG00000012504	slirp	79	70.000	Cyprinodon_variegatus
ENSLBEG00000007564	slirp	95	67.368	ENSDARG00000097753	slirp	95	67.347	Danio_rerio
ENSLBEG00000007564	slirp	88	49.438	ENSDNOG00000007721	SLIRP	81	49.438	Dasypus_novemcinctus
ENSLBEG00000007564	slirp	87	51.724	ENSDORG00000012379	Slirp	78	51.724	Dipodomys_ordii
ENSLBEG00000007564	slirp	88	51.136	ENSETEG00000010345	SLIRP	81	51.136	Echinops_telfairi
ENSLBEG00000007564	slirp	89	50.562	ENSEASG00005020193	SLIRP	80	50.562	Equus_asinus_asinus
ENSLBEG00000007564	slirp	88	48.315	ENSEEUG00000007257	SLIRP	88	48.315	Erinaceus_europaeus
ENSLBEG00000007564	slirp	96	68.750	ENSELUG00000016800	slirp	95	68.750	Esox_lucius
ENSLBEG00000007564	slirp	67	56.716	ENSFCAG00000036326	SLIRP	68	56.716	Felis_catus
ENSLBEG00000007564	slirp	78	52.564	ENSFALG00000012583	SLIRP	86	48.352	Ficedula_albicollis
ENSLBEG00000007564	slirp	85	50.575	ENSFDAG00000008347	SLIRP	77	50.575	Fukomys_damarensis
ENSLBEG00000007564	slirp	78	76.923	ENSFHEG00000004709	slirp	85	76.923	Fundulus_heteroclitus
ENSLBEG00000007564	slirp	97	70.103	ENSGMOG00000016948	slirp	93	70.103	Gadus_morhua
ENSLBEG00000007564	slirp	93	49.474	ENSGALG00000031238	SLIRP	96	49.474	Gallus_gallus
ENSLBEG00000007564	slirp	100	70.000	ENSGAFG00000010998	slirp	100	70.000	Gambusia_affinis
ENSLBEG00000007564	slirp	82	68.293	ENSGACG00000020137	slirp	95	68.293	Gasterosteus_aculeatus
ENSLBEG00000007564	slirp	93	61.702	ENSGAGG00000009953	SLIRP	65	61.702	Gopherus_agassizii
ENSLBEG00000007564	slirp	85	51.765	ENSGGOG00000011059	-	77	51.765	Gorilla_gorilla
ENSLBEG00000007564	slirp	88	44.444	ENSHGLG00000018491	SLIRP	81	44.444	Heterocephalus_glaber_female
ENSLBEG00000007564	slirp	88	44.444	ENSHGLG00100014153	SLIRP	81	44.444	Heterocephalus_glaber_male
ENSLBEG00000007564	slirp	96	69.792	ENSHCOG00000006795	slirp	97	69.792	Hippocampus_comes
ENSLBEG00000007564	slirp	98	64.286	ENSIPUG00000010214	SLIRP	98	64.286	Ictalurus_punctatus
ENSLBEG00000007564	slirp	88	46.667	ENSSTOG00000034316	SLIRP	81	46.667	Ictidomys_tridecemlineatus
ENSLBEG00000007564	slirp	100	63.000	ENSKMAG00000002038	slirp	96	63.000	Kryptolebias_marmoratus
ENSLBEG00000007564	slirp	97	58.763	ENSLACG00000013434	SLIRP	93	58.763	Latimeria_chalumnae
ENSLBEG00000007564	slirp	88	50.000	ENSMFAG00000042960	SLIRP	72	59.701	Macaca_fascicularis
ENSLBEG00000007564	slirp	85	52.941	ENSMMUG00000029256	SLIRP	79	52.941	Macaca_mulatta
ENSLBEG00000007564	slirp	88	50.000	ENSMNEG00000028921	SLIRP	72	59.701	Macaca_nemestrina
ENSLBEG00000007564	slirp	67	59.701	ENSMLEG00000043644	SLIRP	68	59.701	Mandrillus_leucophaeus
ENSLBEG00000007564	slirp	98	72.449	ENSMZEG00005004617	slirp	99	72.449	Maylandia_zebra
ENSLBEG00000007564	slirp	89	49.438	ENSMAUG00000003857	Slirp	80	49.438	Mesocricetus_auratus
ENSLBEG00000007564	slirp	70	57.143	ENSMICG00000012080	SLIRP	65	57.143	Microcebus_murinus
ENSLBEG00000007564	slirp	87	49.425	ENSMOCG00000016019	Slirp	78	49.425	Microtus_ochrogaster
ENSLBEG00000007564	slirp	100	69.000	ENSMMOG00000018268	slirp	100	69.000	Mola_mola
ENSLBEG00000007564	slirp	70	45.714	ENSMODG00000005207	-	99	45.714	Monodelphis_domestica
ENSLBEG00000007564	slirp	100	66.000	ENSMALG00000012581	slirp	100	66.000	Monopterus_albus
ENSLBEG00000007564	slirp	87	50.575	MGP_CAROLIEiJ_G0017995	Slirp	81	50.575	Mus_caroli
ENSLBEG00000007564	slirp	87	50.575	ENSMUSG00000021040	Slirp	78	50.575	Mus_musculus
ENSLBEG00000007564	slirp	87	50.575	MGP_SPRETEiJ_G0018840	Slirp	78	50.575	Mus_spretus
ENSLBEG00000007564	slirp	88	51.136	ENSMLUG00000024998	-	79	51.136	Myotis_lucifugus
ENSLBEG00000007564	slirp	88	50.000	ENSMLUG00000029544	-	81	50.000	Myotis_lucifugus
ENSLBEG00000007564	slirp	87	48.276	ENSNGAG00000016363	Slirp	84	48.276	Nannospalax_galili
ENSLBEG00000007564	slirp	89	44.944	ENSNLEG00000027238	-	80	52.857	Nomascus_leucogenys
ENSLBEG00000007564	slirp	89	43.820	ENSNLEG00000032459	-	82	43.820	Nomascus_leucogenys
ENSLBEG00000007564	slirp	76	56.579	ENSODEG00000012580	SLIRP	76	55.714	Octodon_degus
ENSLBEG00000007564	slirp	98	71.429	ENSONIG00000011692	slirp	99	71.429	Oreochromis_niloticus
ENSLBEG00000007564	slirp	80	53.659	ENSOANG00000022366	SLIRP	74	53.659	Ornithorhynchus_anatinus
ENSLBEG00000007564	slirp	100	70.000	ENSORLG00000010761	slirp	78	70.000	Oryzias_latipes
ENSLBEG00000007564	slirp	100	69.000	ENSORLG00020022188	slirp	100	69.000	Oryzias_latipes_hni
ENSLBEG00000007564	slirp	99	69.697	ENSORLG00015020171	slirp	98	69.697	Oryzias_latipes_hsok
ENSLBEG00000007564	slirp	100	71.000	ENSOMEG00000019321	slirp	100	71.000	Oryzias_melastigma
ENSLBEG00000007564	slirp	85	52.941	ENSPPAG00000040710	-	77	52.941	Pan_paniscus
ENSLBEG00000007564	slirp	67	56.716	ENSPPRG00000014350	SLIRP	68	56.716	Panthera_pardus
ENSLBEG00000007564	slirp	67	56.716	ENSPTIG00000014196	SLIRP	68	56.716	Panthera_tigris_altaica
ENSLBEG00000007564	slirp	85	51.765	ENSPTRG00000030691	SLIRP	79	51.765	Pan_troglodytes
ENSLBEG00000007564	slirp	74	58.108	ENSPANG00000026323	SLIRP	72	59.701	Papio_anubis
ENSLBEG00000007564	slirp	64	70.312	ENSPKIG00000008831	slirp	63	70.312	Paramormyrops_kingsleyae
ENSLBEG00000007564	slirp	80	67.500	ENSPMGG00000010541	slirp	92	67.500	Periophthalmus_magnuspinnatus
ENSLBEG00000007564	slirp	87	50.000	ENSPEMG00000013234	Slirp	88	49.000	Peromyscus_maniculatus_bairdii
ENSLBEG00000007564	slirp	90	44.444	ENSPMAG00000009355	slirp	100	44.444	Petromyzon_marinus
ENSLBEG00000007564	slirp	79	45.570	ENSPCIG00000026842	-	85	45.570	Phascolarctos_cinereus
ENSLBEG00000007564	slirp	99	72.727	ENSPFOG00000006758	slirp	99	72.727	Poecilia_formosa
ENSLBEG00000007564	slirp	99	72.727	ENSPLAG00000011140	slirp	99	72.727	Poecilia_latipinna
ENSLBEG00000007564	slirp	99	72.727	ENSPMEG00000019535	slirp	99	72.727	Poecilia_mexicana
ENSLBEG00000007564	slirp	99	72.727	ENSPREG00000011673	slirp	99	72.727	Poecilia_reticulata
ENSLBEG00000007564	slirp	74	54.054	ENSPPYG00000006030	SLIRP	68	54.054	Pongo_abelii
ENSLBEG00000007564	slirp	87	50.575	ENSPCOG00000015159	SLIRP	80	48.864	Propithecus_coquereli
ENSLBEG00000007564	slirp	98	65.306	ENSPNAG00000008633	slirp	99	65.306	Pygocentrus_nattereri
ENSLBEG00000007564	slirp	88	53.409	ENSRBIG00000032222	-	81	53.409	Rhinopithecus_bieti
ENSLBEG00000007564	slirp	74	52.703	ENSRBIG00000035817	-	79	50.575	Rhinopithecus_bieti
ENSLBEG00000007564	slirp	67	58.209	ENSRBIG00000032998	-	62	58.209	Rhinopithecus_bieti
ENSLBEG00000007564	slirp	65	60.000	ENSRBIG00000031396	-	65	60.000	Rhinopithecus_bieti
ENSLBEG00000007564	slirp	88	53.409	ENSRROG00000036656	-	81	53.409	Rhinopithecus_roxellana
ENSLBEG00000007564	slirp	71	60.563	ENSRROG00000041312	-	70	60.563	Rhinopithecus_roxellana
ENSLBEG00000007564	slirp	67	59.701	ENSRROG00000017133	-	70	59.701	Rhinopithecus_roxellana
ENSLBEG00000007564	slirp	65	58.462	ENSRROG00000035604	-	65	58.462	Rhinopithecus_roxellana
ENSLBEG00000007564	slirp	73	54.795	ENSSBOG00000020014	SLIRP	72	58.209	Saimiri_boliviensis_boliviensis
ENSLBEG00000007564	slirp	98	59.184	ENSSFOG00015011165	slirp	99	59.184	Scleropages_formosus
ENSLBEG00000007564	slirp	100	50.000	ENSSMAG00000012930	slirp	100	50.000	Scophthalmus_maximus
ENSLBEG00000007564	slirp	100	73.000	ENSSDUG00000021883	slirp	66	73.000	Seriola_dumerili
ENSLBEG00000007564	slirp	100	73.000	ENSSLDG00000023136	slirp	91	73.000	Seriola_lalandi_dorsalis
ENSLBEG00000007564	slirp	91	54.639	ENSSPUG00000009346	SLIRP	99	54.639	Sphenodon_punctatus
ENSLBEG00000007564	slirp	100	63.000	ENSSPAG00000013477	slirp	100	63.000	Stegastes_partitus
ENSLBEG00000007564	slirp	88	47.778	ENSSSCG00000028167	SLIRP	81	47.778	Sus_scrofa
ENSLBEG00000007564	slirp	78	53.846	ENSTGUG00000012337	SLIRP	89	50.000	Taeniopygia_guttata
ENSLBEG00000007564	slirp	98	64.646	ENSTRUG00000020127	slirp	98	64.646	Takifugu_rubripes
ENSLBEG00000007564	slirp	88	53.846	ENSUAMG00000022445	SLIRP	81	53.846	Ursus_americanus
ENSLBEG00000007564	slirp	88	52.747	ENSUMAG00000007166	SLIRP	81	52.747	Ursus_maritimus
ENSLBEG00000007564	slirp	85	53.488	ENSVPAG00000001781	SLIRP	80	53.488	Vicugna_pacos
ENSLBEG00000007564	slirp	76	56.579	ENSVVUG00000004436	SLIRP	68	56.579	Vulpes_vulpes
ENSLBEG00000007564	slirp	81	61.728	ENSXETG00000030343	SLIRP	91	61.728	Xenopus_tropicalis
ENSLBEG00000007564	slirp	100	68.000	ENSXCOG00000009422	slirp	100	68.000	Xiphophorus_couchianus
ENSLBEG00000007564	slirp	100	70.000	ENSXMAG00000015655	slirp	100	70.000	Xiphophorus_maculatus