EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000007603 (Gene tree)
Gene ID: 109995877
Gene Symbol: gatc
Alias: si:rp71-1c23.3
Full Name: glutamyl-tRNA amidotransferase subunit C
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 2327 bases
Position: chrFKLU01000344.1:111994-114320
Accession: 109995877
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000009816	Glu-tRNAGln	PF02686.15	6.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000010349	-	866	XM_020649756	ENSLBEP00000009816	181 (aa)	XP_020505412	UPI0009B3997E

Gene Model

Click here to download ENSLBEG00000007603's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000007603's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000007603	gatc	56	62.376	ENSG00000257218	GATC	100	72.340	Homo_sapiens
ENSLBEG00000007603	gatc	64	54.701	ENSAMEG00000013298	-	86	54.701	Ailuropoda_melanoleuca
ENSLBEG00000007603	gatc	61	75.676	ENSACIG00000016853	gatc	79	75.676	Amphilophus_citrinellus
ENSLBEG00000007603	gatc	68	82.927	ENSAOCG00000014641	gatc	98	82.927	Amphiprion_ocellaris
ENSLBEG00000007603	gatc	100	64.615	ENSAPEG00000023411	gatc	100	64.615	Amphiprion_percula
ENSLBEG00000007603	gatc	52	86.316	ENSATEG00000009237	gatc	79	86.316	Anabas_testudineus
ENSLBEG00000007603	gatc	61	62.727	ENSACAG00000002868	-	81	62.727	Anolis_carolinensis
ENSLBEG00000007603	gatc	56	63.366	ENSANAG00000034389	-	74	63.366	Aotus_nancymaae
ENSLBEG00000007603	gatc	100	66.146	ENSACLG00000026251	gatc	100	66.146	Astatotilapia_calliptera
ENSLBEG00000007603	gatc	73	73.485	ENSAMXG00000004252	gatc	65	67.114	Astyanax_mexicanus
ENSLBEG00000007603	gatc	51	62.366	ENSBTAG00000012791	GATC	68	62.366	Bos_taurus
ENSLBEG00000007603	gatc	64	37.069	WBGene00013433	Y66D12A.7	66	37.069	Caenorhabditis_elegans
ENSLBEG00000007603	gatc	53	65.625	ENSCJAG00000001183	-	53	65.625	Callithrix_jacchus
ENSLBEG00000007603	gatc	56	61.386	ENSCAFG00000010311	-	74	61.386	Canis_familiaris
ENSLBEG00000007603	gatc	56	61.386	ENSCAFG00020020606	-	74	61.386	Canis_lupus_dingo
ENSLBEG00000007603	gatc	51	62.366	ENSCHIG00000019423	-	68	62.366	Capra_hircus
ENSLBEG00000007603	gatc	53	64.583	ENSTSYG00000006845	-	71	64.583	Carlito_syrichta
ENSLBEG00000007603	gatc	63	56.410	ENSCPOG00000026436	-	78	56.410	Cavia_porcellus
ENSLBEG00000007603	gatc	56	63.366	ENSCCAG00000022235	-	74	63.366	Cebus_capucinus
ENSLBEG00000007603	gatc	56	62.376	ENSCATG00000038807	GATC	74	62.376	Cercocebus_atys
ENSLBEG00000007603	gatc	59	61.818	ENSCLAG00000011015	-	69	61.818	Chinchilla_lanigera
ENSLBEG00000007603	gatc	56	63.366	ENSCSAG00000002259	GATC	74	63.366	Chlorocebus_sabaeus
ENSLBEG00000007603	gatc	59	60.550	ENSCHOG00000009235	-	80	60.550	Choloepus_hoffmanni
ENSLBEG00000007603	gatc	71	57.812	ENSCPBG00000011342	-	68	57.812	Chrysemys_picta_bellii
ENSLBEG00000007603	gatc	56	63.366	ENSCANG00000031071	GATC	74	63.366	Colobus_angolensis_palliatus
ENSLBEG00000007603	gatc	53	62.500	ENSCGRG00001019220	-	62	62.500	Cricetulus_griseus_chok1gshd
ENSLBEG00000007603	gatc	53	62.500	ENSCGRG00000004184	-	62	62.500	Cricetulus_griseus_crigri
ENSLBEG00000007603	gatc	99	55.263	ENSCSEG00000016618	-	99	55.263	Cynoglossus_semilaevis
ENSLBEG00000007603	gatc	99	63.978	ENSCSEG00000007798	gatc	93	63.978	Cynoglossus_semilaevis
ENSLBEG00000007603	gatc	88	69.822	ENSCVAG00000004364	gatc	89	69.822	Cyprinodon_variegatus
ENSLBEG00000007603	gatc	88	65.000	ENSDARG00000056855	gatc	85	65.000	Danio_rerio
ENSLBEG00000007603	gatc	62	58.261	ENSDNOG00000012593	-	61	58.261	Dasypus_novemcinctus
ENSLBEG00000007603	gatc	65	43.443	FBgn0064115	GatC	79	43.443	Drosophila_melanogaster
ENSLBEG00000007603	gatc	50	57.143	ENSETEG00000002604	-	67	57.143	Echinops_telfairi
ENSLBEG00000007603	gatc	53	51.042	ENSEBUG00000008772	gatc	55	51.042	Eptatretus_burgeri
ENSLBEG00000007603	gatc	53	65.625	ENSECAG00000011118	-	71	65.625	Equus_caballus
ENSLBEG00000007603	gatc	53	59.375	ENSEEUG00000011638	-	71	59.375	Erinaceus_europaeus
ENSLBEG00000007603	gatc	72	67.407	ENSELUG00000012608	gatc	75	77.670	Esox_lucius
ENSLBEG00000007603	gatc	56	60.396	ENSFCAG00000038718	-	74	60.396	Felis_catus
ENSLBEG00000007603	gatc	62	57.143	ENSFALG00000007564	-	74	57.143	Ficedula_albicollis
ENSLBEG00000007603	gatc	57	61.538	ENSFDAG00000018720	-	76	61.538	Fukomys_damarensis
ENSLBEG00000007603	gatc	99	63.441	ENSFHEG00000014992	GATC	100	63.441	Fundulus_heteroclitus
ENSLBEG00000007603	gatc	79	67.133	ENSGMOG00000008742	gatc	88	67.133	Gadus_morhua
ENSLBEG00000007603	gatc	59	59.434	ENSGALG00000007195	-	80	58.929	Gallus_gallus
ENSLBEG00000007603	gatc	68	78.049	ENSGAFG00000012801	gatc	78	78.049	Gambusia_affinis
ENSLBEG00000007603	gatc	100	63.918	ENSGACG00000008973	gatc	100	63.918	Gasterosteus_aculeatus
ENSLBEG00000007603	gatc	71	59.375	ENSGAGG00000016018	-	70	59.375	Gopherus_agassizii
ENSLBEG00000007603	gatc	50	63.736	ENSGGOG00000026821	GATC	71	63.736	Gorilla_gorilla
ENSLBEG00000007603	gatc	100	65.625	ENSHBUG00000006827	gatc	100	65.625	Haplochromis_burtoni
ENSLBEG00000007603	gatc	60	60.550	ENSHGLG00000011394	GATC	80	60.550	Heterocephalus_glaber_female
ENSLBEG00000007603	gatc	60	58.716	ENSHGLG00100018850	-	80	58.716	Heterocephalus_glaber_male
ENSLBEG00000007603	gatc	71	75.000	ENSHCOG00000009209	gatc	100	75.000	Hippocampus_comes
ENSLBEG00000007603	gatc	71	72.093	ENSIPUG00000023072	gatc	60	72.093	Ictalurus_punctatus
ENSLBEG00000007603	gatc	56	65.347	ENSSTOG00000025740	-	66	65.347	Ictidomys_tridecemlineatus
ENSLBEG00000007603	gatc	54	63.918	ENSJJAG00000000369	Gatc	61	63.918	Jaculus_jaculus
ENSLBEG00000007603	gatc	72	78.462	ENSKMAG00000016476	gatc	100	78.462	Kryptolebias_marmoratus
ENSLBEG00000007603	gatc	70	57.937	ENSLACG00000018239	-	65	57.937	Latimeria_chalumnae
ENSLBEG00000007603	gatc	76	67.391	ENSLOCG00000004056	gatc	75	67.391	Lepisosteus_oculatus
ENSLBEG00000007603	gatc	60	58.929	ENSLAFG00000006384	-	73	58.929	Loxodonta_africana
ENSLBEG00000007603	gatc	56	62.376	ENSMFAG00000034197	GATC	74	62.376	Macaca_fascicularis
ENSLBEG00000007603	gatc	56	62.376	ENSMMUG00000046665	GATC	74	62.376	Macaca_mulatta
ENSLBEG00000007603	gatc	56	62.376	ENSMNEG00000034653	GATC	74	62.376	Macaca_nemestrina
ENSLBEG00000007603	gatc	56	63.366	ENSMLEG00000039862	GATC	74	63.366	Mandrillus_leucophaeus
ENSLBEG00000007603	gatc	100	67.033	ENSMAMG00000015851	gatc	100	67.033	Mastacembelus_armatus
ENSLBEG00000007603	gatc	100	66.146	ENSMZEG00005016072	gatc	100	66.146	Maylandia_zebra
ENSLBEG00000007603	gatc	59	61.321	ENSMGAG00000008733	-	100	61.321	Meleagris_gallopavo
ENSLBEG00000007603	gatc	64	57.391	ENSMAUG00000012756	Gatc	74	57.391	Mesocricetus_auratus
ENSLBEG00000007603	gatc	56	63.366	ENSMICG00000008669	-	74	63.366	Microcebus_murinus
ENSLBEG00000007603	gatc	53	63.542	ENSMOCG00000005051	Gatc	62	63.542	Microtus_ochrogaster
ENSLBEG00000007603	gatc	64	75.214	ENSMMOG00000017695	gatc	92	77.273	Mola_mola
ENSLBEG00000007603	gatc	57	62.136	ENSMODG00000003152	-	78	62.136	Monodelphis_domestica
ENSLBEG00000007603	gatc	53	64.583	MGP_CAROLIEiJ_G0027623	Gatc	62	64.583	Mus_caroli
ENSLBEG00000007603	gatc	53	64.583	ENSMUSG00000029536	Gatc	62	64.583	Mus_musculus
ENSLBEG00000007603	gatc	53	65.625	MGP_PahariEiJ_G0024203	Gatc	62	65.625	Mus_pahari
ENSLBEG00000007603	gatc	53	63.542	MGP_SPRETEiJ_G0028621	Gatc	62	63.542	Mus_spretus
ENSLBEG00000007603	gatc	56	61.386	ENSMPUG00000003183	-	74	61.386	Mustela_putorius_furo
ENSLBEG00000007603	gatc	52	61.053	ENSMLUG00000010341	-	94	61.053	Myotis_lucifugus
ENSLBEG00000007603	gatc	52	63.830	ENSNGAG00000004734	Gatc	62	63.830	Nannospalax_galili
ENSLBEG00000007603	gatc	100	66.146	ENSNBRG00000007810	gatc	100	66.146	Neolamprologus_brichardi
ENSLBEG00000007603	gatc	60	59.633	ENSNLEG00000015651	GATC	80	59.633	Nomascus_leucogenys
ENSLBEG00000007603	gatc	57	59.615	ENSMEUG00000004064	-	84	59.615	Notamacropus_eugenii
ENSLBEG00000007603	gatc	64	56.522	ENSOPRG00000004226	-	85	56.522	Ochotona_princeps
ENSLBEG00000007603	gatc	50	63.736	ENSODEG00000005919	-	66	63.736	Octodon_degus
ENSLBEG00000007603	gatc	71	78.626	ENSONIG00000013444	gatc	90	78.626	Oreochromis_niloticus
ENSLBEG00000007603	gatc	53	65.625	ENSOCUG00000009867	-	71	65.625	Oryctolagus_cuniculus
ENSLBEG00000007603	gatc	66	76.667	ENSORLG00000007156	gatc	99	76.667	Oryzias_latipes
ENSLBEG00000007603	gatc	100	59.896	ENSORLG00020014991	gatc	100	59.896	Oryzias_latipes_hni
ENSLBEG00000007603	gatc	100	59.896	ENSORLG00015003450	gatc	100	59.896	Oryzias_latipes_hsok
ENSLBEG00000007603	gatc	100	60.963	ENSOMEG00000002280	gatc	100	60.963	Oryzias_melastigma
ENSLBEG00000007603	gatc	58	60.952	ENSOGAG00000003850	-	96	60.952	Otolemur_garnettii
ENSLBEG00000007603	gatc	53	60.396	ENSOARG00000012338	-	78	60.396	Ovis_aries
ENSLBEG00000007603	gatc	56	62.376	ENSPPAG00000029164	GATC	74	62.376	Pan_paniscus
ENSLBEG00000007603	gatc	56	60.396	ENSPPRG00000000929	-	74	60.396	Panthera_pardus
ENSLBEG00000007603	gatc	56	60.396	ENSPTIG00000009889	-	74	60.396	Panthera_tigris_altaica
ENSLBEG00000007603	gatc	56	62.376	ENSPTRG00000049887	GATC	75	62.376	Pan_troglodytes
ENSLBEG00000007603	gatc	52	64.211	ENSPANG00000033975	GATC	70	64.211	Papio_anubis
ENSLBEG00000007603	gatc	73	67.424	ENSPKIG00000024856	gatc	68	67.424	Paramormyrops_kingsleyae
ENSLBEG00000007603	gatc	64	61.207	ENSPSIG00000011112	-	99	61.207	Pelodiscus_sinensis
ENSLBEG00000007603	gatc	68	79.675	ENSPMGG00000018829	gatc	78	79.675	Periophthalmus_magnuspinnatus
ENSLBEG00000007603	gatc	52	65.957	ENSPEMG00000000665	Gatc	61	65.957	Peromyscus_maniculatus_bairdii
ENSLBEG00000007603	gatc	57	58.654	ENSPCIG00000025999	-	68	58.654	Phascolarctos_cinereus
ENSLBEG00000007603	gatc	87	71.779	ENSPFOG00000011603	gatc	88	71.779	Poecilia_formosa
ENSLBEG00000007603	gatc	87	71.166	ENSPLAG00000002471	gatc	88	71.166	Poecilia_latipinna
ENSLBEG00000007603	gatc	87	71.166	ENSPMEG00000020958	gatc	88	71.166	Poecilia_mexicana
ENSLBEG00000007603	gatc	65	82.203	ENSPREG00000022256	gatc	80	82.203	Poecilia_reticulata
ENSLBEG00000007603	gatc	56	62.376	ENSPPYG00000005030	GATC	74	62.376	Pongo_abelii
ENSLBEG00000007603	gatc	69	50.400	ENSPCAG00000013864	-	91	50.400	Procavia_capensis
ENSLBEG00000007603	gatc	50	63.736	ENSPCOG00000009493	-	71	63.736	Propithecus_coquereli
ENSLBEG00000007603	gatc	60	51.376	ENSPCOG00000015558	-	84	51.376	Propithecus_coquereli
ENSLBEG00000007603	gatc	57	60.577	ENSPVAG00000002228	-	77	60.577	Pteropus_vampyrus
ENSLBEG00000007603	gatc	100	66.146	ENSPNYG00000016015	gatc	100	66.146	Pundamilia_nyererei
ENSLBEG00000007603	gatc	73	69.697	ENSPNAG00000001239	gatc	62	66.906	Pygocentrus_nattereri
ENSLBEG00000007603	gatc	52	69.474	ENSRNOG00000001161	Gatc	61	69.474	Rattus_norvegicus
ENSLBEG00000007603	gatc	61	60.177	ENSRNOG00000045621	Gatc	74	60.177	Rattus_norvegicus
ENSLBEG00000007603	gatc	56	61.386	ENSRBIG00000033363	GATC	74	61.386	Rhinopithecus_bieti
ENSLBEG00000007603	gatc	56	61.386	ENSRROG00000042802	GATC	74	61.386	Rhinopithecus_roxellana
ENSLBEG00000007603	gatc	60	57.798	ENSSBOG00000033750	-	80	57.798	Saimiri_boliviensis_boliviensis
ENSLBEG00000007603	gatc	55	62.000	ENSSHAG00000005745	-	94	62.000	Sarcophilus_harrisii
ENSLBEG00000007603	gatc	67	71.311	ENSSFOG00015002508	gatc	78	68.293	Scleropages_formosus
ENSLBEG00000007603	gatc	100	72.376	ENSSMAG00000014280	gatc	100	72.376	Scophthalmus_maximus
ENSLBEG00000007603	gatc	100	68.718	ENSSDUG00000012206	gatc	100	68.718	Seriola_dumerili
ENSLBEG00000007603	gatc	100	69.231	ENSSLDG00000025159	gatc	98	69.231	Seriola_lalandi_dorsalis
ENSLBEG00000007603	gatc	64	55.652	ENSSPUG00000015693	-	88	53.279	Sphenodon_punctatus
ENSLBEG00000007603	gatc	100	68.586	ENSSPAG00000011860	gatc	100	68.586	Stegastes_partitus
ENSLBEG00000007603	gatc	55	64.646	ENSSSCG00000032747	-	72	64.646	Sus_scrofa
ENSLBEG00000007603	gatc	60	60.185	ENSTGUG00000009561	-	100	60.185	Taeniopygia_guttata
ENSLBEG00000007603	gatc	76	75.182	ENSTRUG00000021596	gatc	69	75.182	Takifugu_rubripes
ENSLBEG00000007603	gatc	85	69.481	ENSTNIG00000015879	gatc	74	69.481	Tetraodon_nigroviridis
ENSLBEG00000007603	gatc	55	63.000	ENSTTRG00000000144	GATC	74	63.000	Tursiops_truncatus
ENSLBEG00000007603	gatc	64	55.556	ENSUAMG00000015523	-	86	55.556	Ursus_americanus
ENSLBEG00000007603	gatc	56	61.386	ENSVVUG00000021055	-	74	61.386	Vulpes_vulpes
ENSLBEG00000007603	gatc	61	83.784	ENSXCOG00000017087	gatc	81	83.784	Xiphophorus_couchianus
ENSLBEG00000007603	gatc	92	67.630	ENSXMAG00000018267	gatc	94	67.630	Xiphophorus_maculatus