EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000007681 (Gene tree)
Gene ID: 109994112
Gene Symbol: si:dkey-16l2.16
Alias: -
Full Name: ras-related protein Rab-35-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 8619 bases
Position: chrFKLU01000279.1:674412-683030
Accession: 109994112
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000009928	MMR_HSR1	PF01926.23	5.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000010489	-	579	-	ENSLBEP00000009950	192 (aa)	-	-
ENSLBET00000010468	-	3875	XM_020647285	ENSLBEP00000009928	209 (aa)	XP_020502941	UPI0009B31FBC

Gene Model

Click here to download ENSLBEG00000007681's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000007681's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000007681	si:dkey-16l2.16	86	38.889	ENSLBEG00000003101	rab4a	79	40.476
ENSLBEG00000007681	si:dkey-16l2.16	99	51.691	ENSLBEG00000021040	rab1ba	81	60.494
ENSLBEG00000007681	si:dkey-16l2.16	77	47.561	ENSLBEG00000001313	RAB39B	77	47.561
ENSLBEG00000007681	si:dkey-16l2.16	75	35.443	ENSLBEG00000028450	kras	88	33.333
ENSLBEG00000007681	si:dkey-16l2.16	81	40.698	ENSLBEG00000013756	rab12	71	40.698
ENSLBEG00000007681	si:dkey-16l2.16	76	46.875	ENSLBEG00000002367	rab25a	75	46.875
ENSLBEG00000007681	si:dkey-16l2.16	76	46.541	ENSLBEG00000020796	rab2a	83	46.795
ENSLBEG00000007681	si:dkey-16l2.16	82	44.571	ENSLBEG00000005861	rab18a	81	45.087
ENSLBEG00000007681	si:dkey-16l2.16	77	39.634	ENSLBEG00000003748	rab6a	74	39.610
ENSLBEG00000007681	si:dkey-16l2.16	98	41.346	ENSLBEG00000006087	rab11ba	80	45.402
ENSLBEG00000007681	si:dkey-16l2.16	94	35.678	ENSLBEG00000027539	-	72	41.667
ENSLBEG00000007681	si:dkey-16l2.16	80	42.262	ENSLBEG00000002516	rab5aa	74	42.262
ENSLBEG00000007681	si:dkey-16l2.16	78	42.945	ENSLBEG00000026790	-	76	42.945
ENSLBEG00000007681	si:dkey-16l2.16	77	39.394	ENSLBEG00000019372	rab6bb	74	38.961
ENSLBEG00000007681	si:dkey-16l2.16	97	33.971	ENSLBEG00000018812	RAB29	83	39.375
ENSLBEG00000007681	si:dkey-16l2.16	78	42.331	ENSLBEG00000019435	rab14	76	42.331
ENSLBEG00000007681	si:dkey-16l2.16	99	41.148	ENSLBEG00000026989	RAB15	81	46.784
ENSLBEG00000007681	si:dkey-16l2.16	98	41.148	ENSLBEG00000015248	rab11bb	80	45.402
ENSLBEG00000007681	si:dkey-16l2.16	97	32.407	ENSLBEG00000005018	rab32b	81	35.393
ENSLBEG00000007681	si:dkey-16l2.16	73	40.909	ENSLBEG00000008746	RAB41	73	40.909
ENSLBEG00000007681	si:dkey-16l2.16	95	35.577	ENSLBEG00000026006	rab34a	66	38.857
ENSLBEG00000007681	si:dkey-16l2.16	98	42.308	ENSLBEG00000026857	rab11a	81	45.977
ENSLBEG00000007681	si:dkey-16l2.16	89	43.455	ENSLBEG00000014427	rab33a	76	45.930
ENSLBEG00000007681	si:dkey-16l2.16	99	71.498	ENSLBEG00000001618	rab35b	86	80.347
ENSLBEG00000007681	si:dkey-16l2.16	95	32.020	ENSLBEG00000027819	rab34b	73	37.671
ENSLBEG00000007681	si:dkey-16l2.16	85	45.000	ENSLBEG00000025798	zgc:101559	77	45.304
ENSLBEG00000007681	si:dkey-16l2.16	77	46.951	ENSLBEG00000022630	-	77	46.951
ENSLBEG00000007681	si:dkey-16l2.16	69	47.020	ENSLBEG00000018063	-	63	47.020
ENSLBEG00000007681	si:dkey-16l2.16	79	32.544	ENSLBEG00000025705	si:ch73-116o1.2	79	32.544
ENSLBEG00000007681	si:dkey-16l2.16	82	41.714	ENSLBEG00000001193	rab42a	81	41.714
ENSLBEG00000007681	si:dkey-16l2.16	78	61.350	ENSLBEG00000027781	rab1ab	79	62.500
ENSLBEG00000007681	si:dkey-16l2.16	78	40.000	ENSLBEG00000003235	rab22a	85	40.000
ENSLBEG00000007681	si:dkey-16l2.16	96	35.437	ENSLBEG00000018180	si:dkey-13a21.4	87	38.547
ENSLBEG00000007681	si:dkey-16l2.16	80	36.994	ENSLBEG00000011478	rab9b	79	36.994
ENSLBEG00000007681	si:dkey-16l2.16	84	32.222	ENSLBEG00000019137	rhebl1	79	34.395
ENSLBEG00000007681	si:dkey-16l2.16	55	31.356	ENSLBEG00000011152	arl4d	59	31.356
ENSLBEG00000007681	si:dkey-16l2.16	81	41.765	ENSLBEG00000010408	-	76	40.719
ENSLBEG00000007681	si:dkey-16l2.16	77	32.298	ENSLBEG00000013176	rab23	78	32.500
ENSLBEG00000007681	si:dkey-16l2.16	79	32.240	ENSLBEG00000016218	rasl11a	68	32.240
ENSLBEG00000007681	si:dkey-16l2.16	98	38.164	ENSLBEG00000005981	-	79	41.618
ENSLBEG00000007681	si:dkey-16l2.16	55	30.508	ENSLBEG00000013638	arl4aa	64	30.508
ENSLBEG00000007681	si:dkey-16l2.16	82	35.795	ENSLBEG00000027628	si:cabz01085950.1	83	35.928
ENSLBEG00000007681	si:dkey-16l2.16	77	38.788	ENSLBEG00000026930	rab6ba	79	39.024
ENSLBEG00000007681	si:dkey-16l2.16	78	36.095	ENSLBEG00000014885	rheb	88	36.095
ENSLBEG00000007681	si:dkey-16l2.16	85	48.315	ENSLBEG00000001146	rab30	88	48.315
ENSLBEG00000007681	si:dkey-16l2.16	74	40.000	ENSLBEG00000005128	-	71	40.000
ENSLBEG00000007681	si:dkey-16l2.16	80	43.605	ENSLBEG00000002926	si:dkey-34d22.5	78	43.605
ENSLBEG00000007681	si:dkey-16l2.16	74	34.161	ENSLBEG00000028391	dnajc27	59	34.161
ENSLBEG00000007681	si:dkey-16l2.16	55	30.172	ENSLBEG00000025929	arl3	63	30.172
ENSLBEG00000007681	si:dkey-16l2.16	82	32.164	ENSLBEG00000003644	rabl2	75	32.184
ENSLBEG00000007681	si:dkey-16l2.16	96	32.850	ENSLBEG00000020582	rab9a	83	36.310
ENSLBEG00000007681	si:dkey-16l2.16	78	39.645	ENSLBEG00000017798	-	81	39.645
ENSLBEG00000007681	si:dkey-16l2.16	75	48.101	ENSLBEG00000016446	rab25b	76	48.101
ENSLBEG00000007681	si:dkey-16l2.16	96	36.816	ENSLBEG00000004128	rab5c	76	40.476
ENSLBEG00000007681	si:dkey-16l2.16	80	30.000	ENSLBEG00000000119	rras2	83	30.769
ENSLBEG00000007681	si:dkey-16l2.16	86	44.565	ENSLBEG00000019428	rab18b	80	46.951
ENSLBEG00000007681	si:dkey-16l2.16	78	59.756	ENSLBEG00000027226	-	70	59.756
ENSLBEG00000007681	si:dkey-16l2.16	95	31.220	ENSLBEG00000027691	RAB17	71	33.939
ENSLBEG00000007681	si:dkey-16l2.16	83	48.276	ENSLBEG00000013463	rab15	82	48.276
ENSLBEG00000007681	si:dkey-16l2.16	77	61.111	ENSLBEG00000028426	RAB1A	79	61.875
ENSLBEG00000007681	si:dkey-16l2.16	78	39.645	ENSLBEG00000001796	RAB7A	81	39.645
ENSLBEG00000007681	si:dkey-16l2.16	82	34.483	ENSLBEG00000001905	hrasb	89	35.088
ENSLBEG00000007681	si:dkey-16l2.16	98	40.094	ENSLBEG00000016417	rab11al	76	47.170
ENSLBEG00000007681	si:dkey-16l2.16	97	33.971	ENSLBEG00000006152	-	84	36.994
ENSLBEG00000007681	si:dkey-16l2.16	98	40.865	ENSLBEG00000004172	-	80	44.828
ENSLBEG00000007681	si:dkey-16l2.16	95	40.741	ENSLBEG00000026777	rab33ba	82	42.365
ENSLBEG00000007681	si:dkey-16l2.16	87	46.154	ENSLBEG00000026779	rab13	85	48.235
ENSLBEG00000007681	si:dkey-16l2.16	75	30.061	ENSLBEG00000018738	-	57	30.061
ENSLBEG00000007681	si:dkey-16l2.16	79	59.639	ENSLBEG00000005791	-	77	59.639

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000007681	si:dkey-16l2.16	100	97.608	ENSAPOG00000008263	si:dkey-16l2.16	100	97.608	Acanthochromis_polyacanthus
ENSLBEG00000007681	si:dkey-16l2.16	100	98.086	ENSAOCG00000016825	si:dkey-16l2.16	100	98.086	Amphiprion_ocellaris
ENSLBEG00000007681	si:dkey-16l2.16	100	98.086	ENSAPEG00000006500	si:dkey-16l2.16	100	98.086	Amphiprion_percula
ENSLBEG00000007681	si:dkey-16l2.16	100	96.172	ENSATEG00000019238	si:dkey-16l2.16	100	96.172	Anabas_testudineus
ENSLBEG00000007681	si:dkey-16l2.16	100	95.215	ENSACLG00000018721	si:dkey-16l2.16	100	95.215	Astatotilapia_calliptera
ENSLBEG00000007681	si:dkey-16l2.16	100	95.215	ENSAMXG00000038243	si:dkey-16l2.16	100	95.215	Astyanax_mexicanus
ENSLBEG00000007681	si:dkey-16l2.16	56	97.458	ENSCSEG00000009988	si:dkey-16l2.16	90	97.458	Cynoglossus_semilaevis
ENSLBEG00000007681	si:dkey-16l2.16	100	94.737	ENSCVAG00000003537	si:dkey-16l2.16	100	94.737	Cyprinodon_variegatus
ENSLBEG00000007681	si:dkey-16l2.16	100	93.301	ENSDARG00000037967	si:dkey-16l2.16	99	98.305	Danio_rerio
ENSLBEG00000007681	si:dkey-16l2.16	99	87.981	ENSELUG00000023247	si:dkey-16l2.16	99	86.538	Esox_lucius
ENSLBEG00000007681	si:dkey-16l2.16	58	94.215	ENSFHEG00000000767	si:dkey-16l2.16	78	94.215	Fundulus_heteroclitus
ENSLBEG00000007681	si:dkey-16l2.16	77	85.093	ENSGMOG00000015174	si:dkey-16l2.16	98	85.093	Gadus_morhua
ENSLBEG00000007681	si:dkey-16l2.16	100	88.038	ENSGAFG00000005388	si:dkey-16l2.16	100	88.038	Gambusia_affinis
ENSLBEG00000007681	si:dkey-16l2.16	100	96.172	ENSGACG00000014915	si:dkey-16l2.16	98	96.172	Gasterosteus_aculeatus
ENSLBEG00000007681	si:dkey-16l2.16	100	95.694	ENSHBUG00000019261	si:dkey-16l2.16	100	95.694	Haplochromis_burtoni
ENSLBEG00000007681	si:dkey-16l2.16	100	94.258	ENSHCOG00000006538	si:dkey-16l2.16	100	94.258	Hippocampus_comes
ENSLBEG00000007681	si:dkey-16l2.16	100	92.823	ENSKMAG00000003494	si:dkey-16l2.16	100	92.823	Kryptolebias_marmoratus
ENSLBEG00000007681	si:dkey-16l2.16	100	96.172	ENSMAMG00000019230	si:dkey-16l2.16	100	96.172	Mastacembelus_armatus
ENSLBEG00000007681	si:dkey-16l2.16	100	95.215	ENSMZEG00005002081	si:dkey-16l2.16	100	95.215	Maylandia_zebra
ENSLBEG00000007681	si:dkey-16l2.16	99	97.087	ENSMMOG00000020140	si:dkey-16l2.16	97	97.087	Mola_mola
ENSLBEG00000007681	si:dkey-16l2.16	100	92.823	ENSMALG00000014727	si:dkey-16l2.16	99	92.823	Monopterus_albus
ENSLBEG00000007681	si:dkey-16l2.16	100	94.737	ENSNBRG00000008930	si:dkey-16l2.16	100	94.737	Neolamprologus_brichardi
ENSLBEG00000007681	si:dkey-16l2.16	100	95.215	ENSONIG00000009443	si:dkey-16l2.16	100	95.215	Oreochromis_niloticus
ENSLBEG00000007681	si:dkey-16l2.16	100	90.909	ENSORLG00000001098	si:dkey-16l2.16	99	90.909	Oryzias_latipes
ENSLBEG00000007681	si:dkey-16l2.16	100	90.909	ENSORLG00020000867	si:dkey-16l2.16	99	90.909	Oryzias_latipes_hni
ENSLBEG00000007681	si:dkey-16l2.16	100	88.517	ENSOMEG00000015474	si:dkey-16l2.16	100	88.517	Oryzias_melastigma
ENSLBEG00000007681	si:dkey-16l2.16	100	80.383	ENSPKIG00000018888	si:dkey-16l2.16	94	83.163	Paramormyrops_kingsleyae
ENSLBEG00000007681	si:dkey-16l2.16	100	92.344	ENSPKIG00000005686	-	100	92.344	Paramormyrops_kingsleyae
ENSLBEG00000007681	si:dkey-16l2.16	100	95.215	ENSPMGG00000000751	si:dkey-16l2.16	100	95.215	Periophthalmus_magnuspinnatus
ENSLBEG00000007681	si:dkey-16l2.16	100	88.995	ENSPFOG00000004746	si:dkey-16l2.16	100	88.995	Poecilia_formosa
ENSLBEG00000007681	si:dkey-16l2.16	100	88.517	ENSPLAG00000021043	si:dkey-16l2.16	100	88.517	Poecilia_latipinna
ENSLBEG00000007681	si:dkey-16l2.16	100	88.995	ENSPMEG00000007165	si:dkey-16l2.16	100	88.995	Poecilia_mexicana
ENSLBEG00000007681	si:dkey-16l2.16	100	88.517	ENSPREG00000005323	si:dkey-16l2.16	100	88.517	Poecilia_reticulata
ENSLBEG00000007681	si:dkey-16l2.16	100	95.694	ENSPNYG00000009490	si:dkey-16l2.16	100	95.694	Pundamilia_nyererei
ENSLBEG00000007681	si:dkey-16l2.16	100	95.215	ENSPNAG00000018986	si:dkey-16l2.16	100	95.215	Pygocentrus_nattereri
ENSLBEG00000007681	si:dkey-16l2.16	99	78.846	ENSSFOG00015006414	-	85	82.486	Scleropages_formosus
ENSLBEG00000007681	si:dkey-16l2.16	100	93.301	ENSSFOG00015021448	-	100	93.301	Scleropages_formosus
ENSLBEG00000007681	si:dkey-16l2.16	100	91.388	ENSSMAG00000011769	si:dkey-16l2.16	94	91.388	Scophthalmus_maximus
ENSLBEG00000007681	si:dkey-16l2.16	100	97.129	ENSSDUG00000005719	si:dkey-16l2.16	100	97.129	Seriola_dumerili
ENSLBEG00000007681	si:dkey-16l2.16	100	97.129	ENSSLDG00000003631	si:dkey-16l2.16	100	97.129	Seriola_lalandi_dorsalis
ENSLBEG00000007681	si:dkey-16l2.16	100	98.565	ENSSPAG00000006302	si:dkey-16l2.16	100	98.565	Stegastes_partitus
ENSLBEG00000007681	si:dkey-16l2.16	100	95.215	ENSTRUG00000025076	si:dkey-16l2.16	100	95.215	Takifugu_rubripes
ENSLBEG00000007681	si:dkey-16l2.16	100	94.737	ENSTNIG00000011300	si:dkey-16l2.16	100	94.737	Tetraodon_nigroviridis
ENSLBEG00000007681	si:dkey-16l2.16	100	88.517	ENSXMAG00000021767	si:dkey-16l2.16	100	88.517	Xiphophorus_maculatus