EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000007776 (Gene tree)
Gene ID: 109995900
Gene Symbol: -
Alias: -
Full Name: PR domain zinc finger protein 12-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 7198 bases
Position: chrFKLU01000344.1:147678-154875
Accession: 109995900
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000010088	zf-C2H2	PF00096.26	1.3e-11	1	2
ENSLBEP00000010088	zf-C2H2	PF00096.26	1.3e-11	2	2
ENSLBEP00000010061	zf-C2H2	PF00096.26	1.4e-11	1	2
ENSLBEP00000010061	zf-C2H2	PF00096.26	1.4e-11	2	2
ENSLBEP00000010088	zf-met	PF12874.7	9.1e-07	1	1
ENSLBEP00000010061	zf-met	PF12874.7	1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000010617	-	3428	XM_020649788	ENSLBEP00000010061	399 (aa)	XP_020505444	UPI0009B3FDF3
ENSLBET00000010647	-	1143	-	ENSLBEP00000010088	380 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000007776's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000007776's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000007776	-	74	42.105	ENSLBEG00000022736	prdm5	92	42.105
ENSLBEG00000007776	-	100	80.890	ENSLBEG00000017769	prdm12b	100	79.843

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000007776	-	89	81.306	ENSG00000130711	PRDM12	99	74.227	Homo_sapiens
ENSLBEG00000007776	-	100	72.846	ENSAPOG00000018234	-	100	72.585	Acanthochromis_polyacanthus
ENSLBEG00000007776	-	100	80.000	ENSAPOG00000016051	prdm12b	100	80.256	Acanthochromis_polyacanthus
ENSLBEG00000007776	-	88	81.250	ENSAMEG00000016234	PRDM12	99	81.250	Ailuropoda_melanoleuca
ENSLBEG00000007776	-	100	90.025	ENSACIG00000005193	-	100	88.778	Amphilophus_citrinellus
ENSLBEG00000007776	-	100	79.112	ENSACIG00000019578	prdm12b	100	80.679	Amphilophus_citrinellus
ENSLBEG00000007776	-	100	81.462	ENSAOCG00000015040	prdm12b	100	80.940	Amphiprion_ocellaris
ENSLBEG00000007776	-	100	80.890	ENSAPEG00000015092	prdm12b	100	80.628	Amphiprion_percula
ENSLBEG00000007776	-	100	79.950	ENSAPEG00000022849	-	99	80.941	Amphiprion_percula
ENSLBEG00000007776	-	100	90.674	ENSATEG00000014595	-	100	92.526	Anabas_testudineus
ENSLBEG00000007776	-	89	81.306	ENSANAG00000020616	PRDM12	95	81.009	Aotus_nancymaae
ENSLBEG00000007776	-	100	87.990	ENSACLG00000007631	-	100	87.990	Astatotilapia_calliptera
ENSLBEG00000007776	-	100	77.487	ENSACLG00000011876	prdm12b	100	76.702	Astatotilapia_calliptera
ENSLBEG00000007776	-	100	79.737	ENSAMXG00000033665	prdm12b	100	79.474	Astyanax_mexicanus
ENSLBEG00000007776	-	100	78.068	ENSAMXG00000008540	PRDM12	100	77.372	Astyanax_mexicanus
ENSLBEG00000007776	-	89	81.602	ENSBTAG00000023797	PRDM12	99	74.870	Bos_taurus
ENSLBEG00000007776	-	89	81.306	ENSCJAG00000020540	PRDM12	99	75.328	Callithrix_jacchus
ENSLBEG00000007776	-	77	82.935	ENSCAFG00000023076	PRDM12	99	75.146	Canis_familiaris
ENSLBEG00000007776	-	89	81.602	ENSCAFG00020024046	PRDM12	99	74.870	Canis_lupus_dingo
ENSLBEG00000007776	-	89	81.602	ENSCHIG00000025005	PRDM12	99	75.000	Capra_hircus
ENSLBEG00000007776	-	86	80.000	ENSCPOG00000005901	PRDM12	95	79.692	Cavia_porcellus
ENSLBEG00000007776	-	89	81.306	ENSCCAG00000037485	PRDM12	99	74.611	Cebus_capucinus
ENSLBEG00000007776	-	89	81.306	ENSCATG00000020327	PRDM12	99	74.611	Cercocebus_atys
ENSLBEG00000007776	-	89	80.415	ENSCLAG00000005499	PRDM12	89	80.119	Chinchilla_lanigera
ENSLBEG00000007776	-	89	81.306	ENSCSAG00000014756	PRDM12	99	74.611	Chlorocebus_sabaeus
ENSLBEG00000007776	-	100	78.421	ENSCPBG00000022628	PRDM12	99	77.105	Chrysemys_picta_bellii
ENSLBEG00000007776	-	89	81.602	ENSCGRG00001015005	Prdm12	99	74.677	Cricetulus_griseus_chok1gshd
ENSLBEG00000007776	-	100	85.250	ENSCVAG00000000944	-	100	84.367	Cyprinodon_variegatus
ENSLBEG00000007776	-	100	78.158	ENSCVAG00000017166	prdm12b	100	78.947	Cyprinodon_variegatus
ENSLBEG00000007776	-	100	82.105	ENSDARG00000007430	prdm12b	100	80.263	Danio_rerio
ENSLBEG00000007776	-	88	81.065	ENSDNOG00000042302	PRDM12	99	75.065	Dasypus_novemcinctus
ENSLBEG00000007776	-	86	65.205	ENSEBUG00000016780	prdm12b	76	65.497	Eptatretus_burgeri
ENSLBEG00000007776	-	96	77.473	ENSEASG00005008472	PRDM12	99	75.457	Equus_asinus_asinus
ENSLBEG00000007776	-	89	81.602	ENSECAG00000005933	PRDM12	99	75.457	Equus_caballus
ENSLBEG00000007776	-	100	82.105	ENSELUG00000009905	prdm12b	100	81.053	Esox_lucius
ENSLBEG00000007776	-	100	76.166	ENSELUG00000013674	PRDM12	100	75.907	Esox_lucius
ENSLBEG00000007776	-	89	81.602	ENSFCAG00000043086	PRDM12	99	74.870	Felis_catus
ENSLBEG00000007776	-	100	78.421	ENSFALG00000001445	PRDM12	89	77.895	Ficedula_albicollis
ENSLBEG00000007776	-	100	78.068	ENSFHEG00000003944	prdm12b	100	79.112	Fundulus_heteroclitus
ENSLBEG00000007776	-	100	84.729	ENSFHEG00000007746	-	100	83.251	Fundulus_heteroclitus
ENSLBEG00000007776	-	100	78.684	ENSGMOG00000011797	prdm12b	100	77.895	Gadus_morhua
ENSLBEG00000007776	-	100	78.421	ENSGALG00000003895	PRDM12	99	77.895	Gallus_gallus
ENSLBEG00000007776	-	100	79.737	ENSGAFG00000010827	prdm12b	99	78.947	Gambusia_affinis
ENSLBEG00000007776	-	100	79.319	ENSGACG00000016713	prdm12b	99	78.010	Gasterosteus_aculeatus
ENSLBEG00000007776	-	100	78.421	ENSGAGG00000014083	PRDM12	99	77.105	Gopherus_agassizii
ENSLBEG00000007776	-	89	81.009	ENSGGOG00000010568	PRDM12	99	74.160	Gorilla_gorilla
ENSLBEG00000007776	-	100	79.843	ENSHBUG00000022878	prdm12b	100	79.319	Haplochromis_burtoni
ENSLBEG00000007776	-	100	87.990	ENSHBUG00000022537	-	93	87.990	Haplochromis_burtoni
ENSLBEG00000007776	-	89	80.712	ENSHGLG00000013939	PRDM12	99	74.211	Heterocephalus_glaber_female
ENSLBEG00000007776	-	100	75.385	ENSHCOG00000021167	-	100	74.359	Hippocampus_comes
ENSLBEG00000007776	-	89	80.758	ENSHCOG00000003663	prdm12b	100	73.737	Hippocampus_comes
ENSLBEG00000007776	-	100	75.789	ENSIPUG00000019544	PRDM12	100	75.263	Ictalurus_punctatus
ENSLBEG00000007776	-	100	80.789	ENSIPUG00000017053	prdm12b	100	80.000	Ictalurus_punctatus
ENSLBEG00000007776	-	89	81.602	ENSSTOG00000005986	PRDM12	85	81.306	Ictidomys_tridecemlineatus
ENSLBEG00000007776	-	89	81.306	ENSJJAG00000005424	Prdm12	98	81.009	Jaculus_jaculus
ENSLBEG00000007776	-	94	83.516	ENSKMAG00000021205	-	96	80.645	Kryptolebias_marmoratus
ENSLBEG00000007776	-	100	73.923	ENSKMAG00000016921	prdm12b	100	74.020	Kryptolebias_marmoratus
ENSLBEG00000007776	-	100	78.421	ENSLACG00000017560	PRDM12	99	78.421	Latimeria_chalumnae
ENSLBEG00000007776	-	100	82.000	ENSLOCG00000005429	prdm12b	100	82.216	Lepisosteus_oculatus
ENSLBEG00000007776	-	89	81.602	ENSLAFG00000006979	PRDM12	95	77.562	Loxodonta_africana
ENSLBEG00000007776	-	89	81.306	ENSMFAG00000040322	PRDM12	99	73.711	Macaca_fascicularis
ENSLBEG00000007776	-	89	81.306	ENSMNEG00000037234	PRDM12	99	74.611	Macaca_nemestrina
ENSLBEG00000007776	-	100	78.906	ENSMAMG00000013212	prdm12b	100	79.948	Mastacembelus_armatus
ENSLBEG00000007776	-	100	85.539	ENSMAMG00000018988	-	100	86.029	Mastacembelus_armatus
ENSLBEG00000007776	-	100	87.561	ENSMZEG00005000415	PRDM12	100	87.561	Maylandia_zebra
ENSLBEG00000007776	-	98	78.075	ENSMGAG00000005438	PRDM12	98	77.540	Meleagris_gallopavo
ENSLBEG00000007776	-	100	74.870	ENSMAUG00000013040	Prdm12	99	74.352	Mesocricetus_auratus
ENSLBEG00000007776	-	89	81.602	ENSMICG00000015480	PRDM12	99	75.000	Microcebus_murinus
ENSLBEG00000007776	-	97	76.839	ENSMOCG00000021026	Prdm12	89	81.602	Microtus_ochrogaster
ENSLBEG00000007776	-	100	77.428	ENSMODG00000012108	PRDM12	99	77.165	Monodelphis_domestica
ENSLBEG00000007776	-	84	78.882	ENSMALG00000021901	prdm12b	98	76.716	Monopterus_albus
ENSLBEG00000007776	-	89	81.602	MGP_CAROLIEiJ_G0023414	Prdm12	99	74.870	Mus_caroli
ENSLBEG00000007776	-	89	81.602	ENSMUSG00000079466	Prdm12	99	74.870	Mus_musculus
ENSLBEG00000007776	-	89	81.602	MGP_PahariEiJ_G0024871	Prdm12	99	74.870	Mus_pahari
ENSLBEG00000007776	-	89	81.602	MGP_SPRETEiJ_G0024331	Prdm12	99	74.870	Mus_spretus
ENSLBEG00000007776	-	89	81.602	ENSNGAG00000018480	Prdm12	99	75.263	Nannospalax_galili
ENSLBEG00000007776	-	100	78.646	ENSNBRG00000006727	prdm12b	100	79.948	Neolamprologus_brichardi
ENSLBEG00000007776	-	100	79.699	ENSNBRG00000024312	-	100	79.950	Neolamprologus_brichardi
ENSLBEG00000007776	-	100	70.079	ENSMEUG00000003828	PRDM12	85	86.387	Notamacropus_eugenii
ENSLBEG00000007776	-	89	81.009	ENSOPRG00000008680	PRDM12	98	80.712	Ochotona_princeps
ENSLBEG00000007776	-	89	81.009	ENSODEG00000016282	PRDM12	61	80.712	Octodon_degus
ENSLBEG00000007776	-	64	74.793	ENSOANG00000001043	PRDM12	100	74.699	Ornithorhynchus_anatinus
ENSLBEG00000007776	-	82	81.290	ENSOCUG00000008241	PRDM12	96	80.968	Oryctolagus_cuniculus
ENSLBEG00000007776	-	100	86.946	ENSORLG00000017558	-	100	87.931	Oryzias_latipes
ENSLBEG00000007776	-	100	78.811	ENSORLG00000007114	prdm12b	99	78.756	Oryzias_latipes
ENSLBEG00000007776	-	100	79.587	ENSORLG00020019565	prdm12b	99	79.275	Oryzias_latipes_hni
ENSLBEG00000007776	-	100	87.192	ENSORLG00020013167	-	100	88.424	Oryzias_latipes_hni
ENSLBEG00000007776	-	100	86.735	ENSORLG00015003435	-	100	87.755	Oryzias_latipes_hsok
ENSLBEG00000007776	-	100	78.756	ENSORLG00015007621	prdm12b	99	78.756	Oryzias_latipes_hsok
ENSLBEG00000007776	-	100	87.000	ENSOMEG00000007762	-	100	87.654	Oryzias_melastigma
ENSLBEG00000007776	-	100	79.949	ENSOMEG00000004134	prdm12b	99	79.434	Oryzias_melastigma
ENSLBEG00000007776	-	89	81.602	ENSOGAG00000007557	PRDM12	97	81.306	Otolemur_garnettii
ENSLBEG00000007776	-	79	78.595	ENSPPAG00000031506	-	97	78.261	Pan_paniscus
ENSLBEG00000007776	-	100	69.351	ENSPPRG00000023024	PRDM12	92	69.091	Panthera_pardus
ENSLBEG00000007776	-	89	81.306	ENSPTRG00000043324	-	99	74.419	Pan_troglodytes
ENSLBEG00000007776	-	89	81.306	ENSPTRG00000021475	PRDM12	99	74.419	Pan_troglodytes
ENSLBEG00000007776	-	89	81.306	ENSPANG00000025967	PRDM12	99	74.611	Papio_anubis
ENSLBEG00000007776	-	100	84.211	ENSPKIG00000007228	prdm12b	100	84.211	Paramormyrops_kingsleyae
ENSLBEG00000007776	-	89	79.822	ENSPKIG00000004305	PRDM12	94	79.822	Paramormyrops_kingsleyae
ENSLBEG00000007776	-	100	77.105	ENSPSIG00000006739	PRDM12	99	76.579	Pelodiscus_sinensis
ENSLBEG00000007776	-	100	77.285	ENSPMGG00000008867	prdm12b	99	77.023	Periophthalmus_magnuspinnatus
ENSLBEG00000007776	-	100	80.457	ENSPMGG00000002356	-	100	79.198	Periophthalmus_magnuspinnatus
ENSLBEG00000007776	-	97	77.174	ENSPEMG00000009969	Prdm12	96	76.902	Peromyscus_maniculatus_bairdii
ENSLBEG00000007776	-	100	77.690	ENSPCIG00000024119	PRDM12	99	77.428	Phascolarctos_cinereus
ENSLBEG00000007776	-	100	78.329	ENSPFOG00000019841	prdm12b	100	78.068	Poecilia_formosa
ENSLBEG00000007776	-	100	78.329	ENSPLAG00000016626	prdm12b	99	78.329	Poecilia_latipinna
ENSLBEG00000007776	-	97	78.919	ENSPMEG00000016698	prdm12b	99	78.649	Poecilia_mexicana
ENSLBEG00000007776	-	100	77.865	ENSPREG00000015073	prdm12b	99	77.604	Poecilia_reticulata
ENSLBEG00000007776	-	91	80.716	ENSPREG00000003211	-	90	79.339	Poecilia_reticulata
ENSLBEG00000007776	-	89	81.306	ENSPPYG00000019694	PRDM12	92	81.009	Pongo_abelii
ENSLBEG00000007776	-	89	81.602	ENSPCOG00000022255	PRDM12	99	74.935	Propithecus_coquereli
ENSLBEG00000007776	-	89	81.602	ENSPVAG00000001511	PRDM12	99	74.935	Pteropus_vampyrus
ENSLBEG00000007776	-	100	80.157	ENSPNYG00000009607	prdm12b	100	79.896	Pundamilia_nyererei
ENSLBEG00000007776	-	100	87.317	ENSPNYG00000013589	-	100	87.561	Pundamilia_nyererei
ENSLBEG00000007776	-	100	81.579	ENSPNAG00000024532	prdm12b	100	80.526	Pygocentrus_nattereri
ENSLBEG00000007776	-	100	75.065	ENSPNAG00000013396	PRDM12	100	74.227	Pygocentrus_nattereri
ENSLBEG00000007776	-	89	81.602	ENSRNOG00000009218	Prdm12	99	74.870	Rattus_norvegicus
ENSLBEG00000007776	-	87	80.851	ENSRBIG00000042712	PRDM12	98	74.202	Rhinopithecus_bieti
ENSLBEG00000007776	-	88	81.081	ENSRROG00000043554	PRDM12	99	80.781	Rhinopithecus_roxellana
ENSLBEG00000007776	-	100	77.225	ENSSHAG00000015972	PRDM12	99	76.963	Sarcophilus_harrisii
ENSLBEG00000007776	-	100	76.276	ENSSMAG00000003754	prdm12b	100	77.017	Scophthalmus_maximus
ENSLBEG00000007776	-	100	90.500	ENSSDUG00000019071	-	100	91.192	Seriola_dumerili
ENSLBEG00000007776	-	100	80.000	ENSSDUG00000023498	prdm12b	100	80.256	Seriola_dumerili
ENSLBEG00000007776	-	100	86.579	ENSSLDG00000013562	-	100	85.263	Seriola_lalandi_dorsalis
ENSLBEG00000007776	-	100	78.718	ENSSLDG00000009557	prdm12b	100	79.231	Seriola_lalandi_dorsalis
ENSLBEG00000007776	-	100	78.947	ENSSPUG00000013424	PRDM12	99	77.632	Sphenodon_punctatus
ENSLBEG00000007776	-	100	80.208	ENSSPAG00000018824	prdm12b	100	79.427	Stegastes_partitus
ENSLBEG00000007776	-	100	79.948	ENSSPAG00000022420	-	100	81.771	Stegastes_partitus
ENSLBEG00000007776	-	89	81.602	ENSSSCG00000005703	PRDM12	99	74.870	Sus_scrofa
ENSLBEG00000007776	-	100	82.199	ENSTRUG00000013239	-	100	80.890	Takifugu_rubripes
ENSLBEG00000007776	-	100	77.604	ENSTRUG00000018659	prdm12b	100	78.906	Takifugu_rubripes
ENSLBEG00000007776	-	100	78.590	ENSTNIG00000005859	-	99	77.546	Tetraodon_nigroviridis
ENSLBEG00000007776	-	100	78.182	ENSTNIG00000009020	prdm12b	99	78.125	Tetraodon_nigroviridis
ENSLBEG00000007776	-	89	81.602	ENSUAMG00000009653	PRDM12	90	81.306	Ursus_americanus
ENSLBEG00000007776	-	89	81.602	ENSVVUG00000027662	PRDM12	77	81.306	Vulpes_vulpes
ENSLBEG00000007776	-	100	79.474	ENSXCOG00000002836	prdm12b	99	79.003	Xiphophorus_couchianus
ENSLBEG00000007776	-	100	78.947	ENSXMAG00000005537	prdm12b	100	79.003	Xiphophorus_maculatus
ENSLBEG00000007776	-	100	86.173	ENSXMAG00000028012	-	100	86.667	Xiphophorus_maculatus