EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000007872 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 4363 bases
Position: chrFKLU01002354.1:35-4397
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000010136	RVT_1	PF00078.27	5.2e-38	1	1
ENSLBEP00000010136	Exo_endo_phos	PF03372.23	4.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000010698	-	4363	-	ENSLBEP00000010136	1322 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000007872's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000007872's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000007872	-	69	99.562	ENSLBEG00000011022	-	100	99.562
ENSLBEG00000007872	-	86	40.957	ENSLBEG00000029018	-	99	40.957
ENSLBEG00000007872	-	74	41.407	ENSLBEG00000008622	-	99	41.247
ENSLBEG00000007872	-	65	43.151	ENSLBEG00000029028	-	92	43.836
ENSLBEG00000007872	-	70	43.194	ENSLBEG00000013480	-	99	43.301
ENSLBEG00000007872	-	68	42.795	ENSLBEG00000011646	-	94	42.904
ENSLBEG00000007872	-	72	99.685	ENSLBEG00000016824	-	100	99.685
ENSLBEG00000007872	-	72	99.685	ENSLBEG00000015201	-	100	99.685
ENSLBEG00000007872	-	72	99.685	ENSLBEG00000014347	-	100	99.685
ENSLBEG00000007872	-	59	97.040	ENSLBEG00000022930	-	94	97.040
ENSLBEG00000007872	-	72	99.580	ENSLBEG00000009538	-	100	99.580
ENSLBEG00000007872	-	100	98.715	ENSLBEG00000012182	-	100	98.715
ENSLBEG00000007872	-	78	98.442	ENSLBEG00000008569	-	100	98.442
ENSLBEG00000007872	-	100	98.715	ENSLBEG00000008483	-	100	98.715
ENSLBEG00000007872	-	100	98.564	ENSLBEG00000007968	-	100	98.564

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000007872	-	99	41.938	ENSATEG00000021554	-	99	41.938	Anabas_testudineus
ENSLBEG00000007872	-	81	47.862	ENSAMXG00000037575	-	98	47.862	Astyanax_mexicanus
ENSLBEG00000007872	-	99	41.535	ENSDARG00000101795	CABZ01033394.1	99	41.535	Danio_rerio
ENSLBEG00000007872	-	97	40.661	ENSDARG00000098779	BX547930.4	99	40.285	Danio_rerio
ENSLBEG00000007872	-	99	39.456	ENSDARG00000105157	BX649434.3	98	38.993	Danio_rerio
ENSLBEG00000007872	-	99	47.615	ENSDARG00000100303	CU638714.1	99	47.615	Danio_rerio
ENSLBEG00000007872	-	97	38.456	ENSGMOG00000001470	-	99	38.485	Gadus_morhua
ENSLBEG00000007872	-	99	40.665	ENSGACG00000000122	-	98	40.255	Gasterosteus_aculeatus
ENSLBEG00000007872	-	67	43.883	ENSKMAG00000017599	-	100	43.883	Kryptolebias_marmoratus
ENSLBEG00000007872	-	98	55.050	ENSORLG00000024845	-	99	54.476	Oryzias_latipes
ENSLBEG00000007872	-	84	40.698	ENSORLG00000024114	-	99	40.335	Oryzias_latipes
ENSLBEG00000007872	-	98	55.255	ENSORLG00020022348	-	99	54.677	Oryzias_latipes_hni
ENSLBEG00000007872	-	100	50.302	ENSOMEG00000013951	-	99	50.302	Oryzias_melastigma
ENSLBEG00000007872	-	99	40.510	ENSSDUG00000006191	-	99	40.693	Seriola_dumerili
ENSLBEG00000007872	-	99	38.918	ENSXMAG00000024932	-	99	38.717	Xiphophorus_maculatus
ENSLBEG00000007872	-	98	40.416	ENSXMAG00000028545	-	99	40.216	Xiphophorus_maculatus
ENSLBEG00000007872	-	97	39.892	ENSXMAG00000028372	-	99	39.583	Xiphophorus_maculatus
ENSLBEG00000007872	-	99	38.993	ENSXMAG00000025449	-	99	38.792	Xiphophorus_maculatus