EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000007888 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 1703 bases
Position: chrFKLU01000111.1:614156-615858
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000010177	DCP1	PF06058.13	6.7e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000010739	-	321	-	ENSLBEP00000010177	106 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000007888's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000007888's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000007888	-	91	71.875	ENSLBEG00000015902	-	79	71.875

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000007888	-	95	72.549	ENSG00000272886	DCP1A	100	72.549	Homo_sapiens
ENSLBEG00000007888	-	100	90.566	ENSAPOG00000000313	-	88	90.566	Acanthochromis_polyacanthus
ENSLBEG00000007888	-	96	83.333	ENSACIG00000001522	-	84	83.333	Amphilophus_citrinellus
ENSLBEG00000007888	-	99	84.762	ENSCSEG00000000411	-	75	84.762	Cynoglossus_semilaevis
ENSLBEG00000007888	-	96	88.235	ENSHCOG00000002646	-	91	88.235	Hippocampus_comes
ENSLBEG00000007888	-	99	69.811	ENSJJAG00000015125	-	91	69.811	Jaculus_jaculus
ENSLBEG00000007888	-	96	96.078	ENSMAMG00000016948	dcp1a	81	96.078	Mastacembelus_armatus
ENSLBEG00000007888	-	99	71.698	ENSMAUG00000004516	-	67	71.698	Mesocricetus_auratus
ENSLBEG00000007888	-	96	72.816	ENSMOCG00000021702	-	100	72.816	Microtus_ochrogaster
ENSLBEG00000007888	-	96	82.353	ENSMMOG00000021667	-	100	82.353	Mola_mola
ENSLBEG00000007888	-	90	73.684	ENSMUSG00000021962	Dcp1a	54	73.684	Mus_musculus
ENSLBEG00000007888	-	96	72.816	ENSNGAG00000019963	-	92	72.816	Nannospalax_galili
ENSLBEG00000007888	-	87	94.565	ENSNBRG00000001616	-	59	94.565	Neolamprologus_brichardi
ENSLBEG00000007888	-	98	71.429	ENSODEG00000008427	-	84	71.429	Octodon_degus
ENSLBEG00000007888	-	93	91.919	ENSPMGG00000001138	-	69	91.919	Periophthalmus_magnuspinnatus
ENSLBEG00000007888	-	84	96.629	ENSPNYG00000009483	-	66	96.629	Pundamilia_nyererei
ENSLBEG00000007888	-	96	73.786	ENSSPUG00000001785	-	97	73.786	Sphenodon_punctatus
ENSLBEG00000007888	-	96	90.196	ENSXCOG00000003158	-	87	90.196	Xiphophorus_couchianus