EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000007913 (Gene tree)
Gene ID: 109987825
Gene Symbol: ddx43
Alias: zgc:174910
Full Name: probable ATP-dependent RNA helicase DDX43
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 7624 bases
Position: chrFKLU01000124.1:575081-582704
Accession: 109987825
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000010386	KH_1	PF00013.29	1.4e-16	1	1
ENSLBEP00000010363	KH_1	PF00013.29	4.7e-16	1	1
ENSLBEP00000010363	DEAD	PF00270.29	2e-43	1	1
ENSLBEP00000010386	DEAD	PF00270.29	5.6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000010949	-	1212	-	ENSLBEP00000010386	403 (aa)	-	-
ENSLBET00000010925	-	2082	XM_020639066	ENSLBEP00000010363	693 (aa)	XP_020494722	-

Gene Model

Click here to download ENSLBEG00000007913's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000007913's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000007913	ddx43	59	36.905	ENSLBEG00000019504	ddx4	58	38.814
ENSLBEG00000007913	ddx43	50	31.232	ENSLBEG00000002817	DDX39A	76	31.232
ENSLBEG00000007913	ddx43	63	43.964	ENSLBEG00000010767	DDX5	67	44.419
ENSLBEG00000007913	ddx43	63	42.825	ENSLBEG00000026649	-	82	41.953
ENSLBEG00000007913	ddx43	54	35.052	ENSLBEG00000028348	ddx47	77	34.794
ENSLBEG00000007913	ddx43	68	42.469	ENSLBEG00000022905	ddx5	72	43.607
ENSLBEG00000007913	ddx43	54	31.877	ENSLBEG00000016890	-	76	31.877
ENSLBEG00000007913	ddx43	52	32.692	ENSLBEG00000018971	eif4a1b	88	32.692
ENSLBEG00000007913	ddx43	50	31.476	ENSLBEG00000011290	zgc:193690	72	31.476
ENSLBEG00000007913	ddx43	66	37.931	ENSLBEG00000019475	ddx23	59	37.931
ENSLBEG00000007913	ddx43	55	31.552	ENSLBEG00000027804	ddx49	77	31.198
ENSLBEG00000007913	ddx43	60	38.679	ENSLBEG00000028087	DDX41	70	39.394
ENSLBEG00000007913	ddx43	52	33.973	ENSLBEG00000008635	eif4a2	87	33.973
ENSLBEG00000007913	ddx43	58	33.824	ENSLBEG00000022261	ddx59	68	33.741
ENSLBEG00000007913	ddx43	59	41.379	ENSLBEG00000016034	-	68	42.054
ENSLBEG00000007913	ddx43	50	31.653	ENSLBEG00000001740	ddx61	77	31.653
ENSLBEG00000007913	ddx43	50	30.946	ENSLBEG00000025618	-	80	30.946
ENSLBEG00000007913	ddx43	58	31.026	ENSLBEG00000015403	ddx52	60	31.159
ENSLBEG00000007913	ddx43	58	42.067	ENSLBEG00000012311	-	65	42.931

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000007913	ddx43	96	73.977	ENSAPOG00000001712	ddx43	93	73.964	Acanthochromis_polyacanthus
ENSLBEG00000007913	ddx43	96	63.934	ENSACIG00000012170	ddx43	95	63.772	Amphilophus_citrinellus
ENSLBEG00000007913	ddx43	96	78.254	ENSAOCG00000001331	ddx43	93	78.107	Amphiprion_ocellaris
ENSLBEG00000007913	ddx43	96	79.049	ENSAPEG00000001133	ddx43	94	77.536	Amphiprion_percula
ENSLBEG00000007913	ddx43	96	79.372	ENSATEG00000012664	ddx43	95	79.429	Anabas_testudineus
ENSLBEG00000007913	ddx43	80	64.222	ENSAPLG00000010182	-	96	70.043	Anas_platyrhynchos
ENSLBEG00000007913	ddx43	98	58.055	ENSACAG00000004387	-	97	58.683	Anolis_carolinensis
ENSLBEG00000007913	ddx43	96	76.401	ENSACLG00000026081	ddx43	96	76.296	Astatotilapia_calliptera
ENSLBEG00000007913	ddx43	96	69.072	ENSAMXG00000004457	ddx43	93	67.765	Astyanax_mexicanus
ENSLBEG00000007913	ddx43	68	46.138	WBGene00013214	Y54G11A.3	94	46.138	Caenorhabditis_elegans
ENSLBEG00000007913	ddx43	99	61.029	ENSCSEG00000000532	ddx43	98	61.425	Cynoglossus_semilaevis
ENSLBEG00000007913	ddx43	95	65.714	ENSCVAG00000009980	ddx43	93	66.013	Cyprinodon_variegatus
ENSLBEG00000007913	ddx43	97	70.991	ENSDARG00000022614	ddx43	95	70.494	Danio_rerio
ENSLBEG00000007913	ddx43	81	50.594	FBgn0037549	CG7878	96	46.444	Drosophila_melanogaster
ENSLBEG00000007913	ddx43	62	47.773	ENSETEG00000019547	-	72	46.332	Echinops_telfairi
ENSLBEG00000007913	ddx43	74	45.224	ENSETEG00000014626	-	89	47.660	Echinops_telfairi
ENSLBEG00000007913	ddx43	96	69.196	ENSELUG00000012126	ddx43	96	68.750	Esox_lucius
ENSLBEG00000007913	ddx43	86	64.154	ENSFALG00000007042	-	98	59.043	Ficedula_albicollis
ENSLBEG00000007913	ddx43	77	56.962	ENSFHEG00000008109	-	90	56.190	Fundulus_heteroclitus
ENSLBEG00000007913	ddx43	74	78.857	ENSFHEG00000011226	ddx43	95	78.352	Fundulus_heteroclitus
ENSLBEG00000007913	ddx43	66	76.923	ENSGMOG00000004178	ddx43	99	76.923	Gadus_morhua
ENSLBEG00000007913	ddx43	62	72.365	ENSGALG00000015928	-	97	72.365	Gallus_gallus
ENSLBEG00000007913	ddx43	96	71.679	ENSGAFG00000012622	ddx43	96	71.742	Gambusia_affinis
ENSLBEG00000007913	ddx43	81	82.801	ENSGACG00000012072	ddx43	100	87.500	Gasterosteus_aculeatus
ENSLBEG00000007913	ddx43	96	55.786	ENSGAGG00000025230	-	98	55.917	Gopherus_agassizii
ENSLBEG00000007913	ddx43	96	75.628	ENSHBUG00000011653	ddx43	96	75.668	Haplochromis_burtoni
ENSLBEG00000007913	ddx43	96	70.685	ENSHCOG00000014704	ddx43	96	70.703	Hippocampus_comes
ENSLBEG00000007913	ddx43	99	67.908	ENSIPUG00000023423	ddx43	96	69.288	Ictalurus_punctatus
ENSLBEG00000007913	ddx43	96	73.932	ENSKMAG00000016167	ddx43	95	73.855	Kryptolebias_marmoratus
ENSLBEG00000007913	ddx43	70	67.210	ENSLACG00000000741	ddx43	100	67.213	Latimeria_chalumnae
ENSLBEG00000007913	ddx43	82	71.777	ENSLOCG00000016170	ddx43	96	64.148	Lepisosteus_oculatus
ENSLBEG00000007913	ddx43	95	72.197	ENSMAMG00000022128	ddx43	95	72.197	Mastacembelus_armatus
ENSLBEG00000007913	ddx43	96	76.401	ENSMZEG00005027349	ddx43	96	76.296	Maylandia_zebra
ENSLBEG00000007913	ddx43	82	64.727	ENSMGAG00000013832	-	97	64.727	Meleagris_gallopavo
ENSLBEG00000007913	ddx43	100	74.074	ENSMMOG00000007346	ddx43	95	75.151	Mola_mola
ENSLBEG00000007913	ddx43	82	60.877	ENSMODG00000018546	-	86	60.526	Monodelphis_domestica
ENSLBEG00000007913	ddx43	82	55.556	ENSMODG00000014335	-	96	54.561	Monodelphis_domestica
ENSLBEG00000007913	ddx43	96	75.439	ENSMALG00000020673	ddx43	95	75.588	Monopterus_albus
ENSLBEG00000007913	ddx43	96	76.119	ENSNBRG00000010942	ddx43	96	76.312	Neolamprologus_brichardi
ENSLBEG00000007913	ddx43	96	76.401	ENSONIG00000001195	ddx43	98	75.635	Oreochromis_niloticus
ENSLBEG00000007913	ddx43	67	55.556	ENSOANG00000006467	-	100	62.176	Ornithorhynchus_anatinus
ENSLBEG00000007913	ddx43	84	80.236	ENSORLG00000002267	ddx43	92	78.325	Oryzias_latipes
ENSLBEG00000007913	ddx43	84	80.236	ENSORLG00020018592	ddx43	91	78.383	Oryzias_latipes_hni
ENSLBEG00000007913	ddx43	84	80.475	ENSORLG00015004854	ddx43	90	78.833	Oryzias_latipes_hsok
ENSLBEG00000007913	ddx43	87	78.489	ENSOMEG00000023418	ddx43	93	78.974	Oryzias_melastigma
ENSLBEG00000007913	ddx43	96	65.288	ENSPKIG00000002941	ddx43	94	64.985	Paramormyrops_kingsleyae
ENSLBEG00000007913	ddx43	80	66.068	ENSPSIG00000002202	-	89	65.647	Pelodiscus_sinensis
ENSLBEG00000007913	ddx43	94	64.844	ENSPMGG00000019854	ddx43	91	64.872	Periophthalmus_magnuspinnatus
ENSLBEG00000007913	ddx43	50	54.369	ENSPMAG00000006112	ddx43	100	68.240	Petromyzon_marinus
ENSLBEG00000007913	ddx43	62	69.087	ENSPCIG00000017981	-	96	69.087	Phascolarctos_cinereus
ENSLBEG00000007913	ddx43	81	54.286	ENSPCIG00000002492	-	89	53.723	Phascolarctos_cinereus
ENSLBEG00000007913	ddx43	96	73.128	ENSPFOG00000004241	ddx43	96	73.343	Poecilia_formosa
ENSLBEG00000007913	ddx43	96	73.275	ENSPLAG00000023362	ddx43	96	73.490	Poecilia_latipinna
ENSLBEG00000007913	ddx43	96	73.128	ENSPMEG00000004870	ddx43	96	73.196	Poecilia_mexicana
ENSLBEG00000007913	ddx43	96	66.568	ENSPREG00000000923	ddx43	96	66.766	Poecilia_reticulata
ENSLBEG00000007913	ddx43	96	70.896	ENSPNYG00000009064	ddx43	96	71.064	Pundamilia_nyererei
ENSLBEG00000007913	ddx43	96	69.457	ENSPNAG00000001232	ddx43	93	69.072	Pygocentrus_nattereri
ENSLBEG00000007913	ddx43	82	60.174	ENSSHAG00000001847	-	88	60.670	Sarcophilus_harrisii
ENSLBEG00000007913	ddx43	82	57.168	ENSSHAG00000016933	-	97	56.591	Sarcophilus_harrisii
ENSLBEG00000007913	ddx43	84	68.439	ENSSFOG00015012193	ddx43	86	70.780	Scleropages_formosus
ENSLBEG00000007913	ddx43	96	77.762	ENSSMAG00000019288	ddx43	95	77.954	Scophthalmus_maximus
ENSLBEG00000007913	ddx43	96	80.712	ENSSDUG00000020120	ddx43	95	80.861	Seriola_dumerili
ENSLBEG00000007913	ddx43	96	77.448	ENSSLDG00000017225	ddx43	93	77.347	Seriola_lalandi_dorsalis
ENSLBEG00000007913	ddx43	69	60.291	ENSSPUG00000018097	-	94	61.638	Sphenodon_punctatus
ENSLBEG00000007913	ddx43	96	79.911	ENSSPAG00000006858	ddx43	95	80.419	Stegastes_partitus
ENSLBEG00000007913	ddx43	84	63.419	ENSTGUG00000012684	-	98	63.248	Taeniopygia_guttata
ENSLBEG00000007913	ddx43	81	69.580	ENSTRUG00000012795	ddx43	83	69.580	Takifugu_rubripes
ENSLBEG00000007913	ddx43	85	73.266	ENSTNIG00000009822	ddx43	96	75.666	Tetraodon_nigroviridis
ENSLBEG00000007913	ddx43	95	59.431	ENSXETG00000011767	ddx43	98	58.955	Xenopus_tropicalis
ENSLBEG00000007913	ddx43	96	67.910	ENSXCOG00000013810	ddx43	96	67.964	Xiphophorus_couchianus
ENSLBEG00000007913	ddx43	100	71.348	ENSXMAG00000017126	ddx43	96	71.408	Xiphophorus_maculatus